RNA–Protein interactions for RNA: ENST00000420453.1

LINC00993-201, long intergenic non-protein coding RNA 993, humanhuman

BASIC

Gene LINC00993, Length 540 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00993-201ENST00000420453 AEBP2Q6ZN18 517 aaPredicted RBP22.69■■□□□ 1.22
LINC00993-201ENST00000420453 CHIC1Q5VXU3 224 aa21.74■■□□□ 1.07
LINC00993-201ENST00000420453 SENP3Q9H4L4 574 aaPredicted RBP19.44■□□□□ 0.7
LINC00993-201ENST00000420453 PHF23Q9BUL5 403 aaPredicted RBP19.18■□□□□ 0.66
LINC00993-201ENST00000420453 FOXD1Q16676 465 aa18.05■□□□□ 0.48
LINC00993-201ENST00000420453 PLPPR3Q6T4P5 718 aa17.48■□□□□ 0.39
LINC00993-201ENST00000420453 PIAS4Q8N2W9 510 aaPredicted RBP16.94■□□□□ 0.3
LINC00993-201ENST00000420453 PPP6R1Q9UPN7 881 aa16.94■□□□□ 0.3
LINC00993-201ENST00000420453 ADRA2BP18089 450 aa16.93■□□□□ 0.3
LINC00993-201ENST00000420453 MSH5O43196 834 aa16.9■□□□□ 0.3
LINC00993-201ENST00000420453 POTEDQ86YR6 584 aa16.2■□□□□ 0.18
LINC00993-201ENST00000420453 SCAF1Q9H7N4 1312 aaKnown RBP15.61■□□□□ 0.09
LINC00993-201ENST00000420453 MAPK8IP2Q13387 824 aaPredicted RBP15.49■□□□□ 0.07
LINC00993-201ENST00000420453 DMRT2Q9Y5R5 561 aa15.41■□□□□ 0.06
LINC00993-201ENST00000420453 PPP4R3CPQ6ZMV5 832 aa15.32■□□□□ 0.04
LINC00993-201ENST00000420453 CNKSR2Q8WXI2 1034 aa15.02■□□□□ -0
LINC00993-201ENST00000420453 HOXD11P31277 338 aaPredicted RBP14.88□□□□□ -0.03
LINC00993-201ENST00000420453 NCBP3Q53F19 620 aaKnown RBP14.85□□□□□ -0.03
LINC00993-201ENST00000420453 DCAF8L1A6NGE4 600 aa14.84□□□□□ -0.03
LINC00993-201ENST00000420453 RNF216Q9NWF9 866 aaPredicted RBP14.84□□□□□ -0.03
LINC00993-201ENST00000420453 NPM3O75607 178 aaKnown RBP14.53□□□□□ -0.08
LINC00993-201ENST00000420453 CACNB1Q02641 598 aaPredicted RBP14.43□□□□□ -0.1
LINC00993-201ENST00000420453 RNF39Q9H2S5 420 aa14.38□□□□□ -0.11
LINC00993-201ENST00000420453 KCNA4P22459 653 aa14.37□□□□□ -0.11
LINC00993-201ENST00000420453 DNAJC5BQ9UF47 199 aa14.37□□□□□ -0.11
LINC00993-201ENST00000420453 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.25□□□□□ -0.13
LINC00993-201ENST00000420453 C1QBPQ07021 282 aaKnown RBP14.23□□□□□ -0.13
LINC00993-201ENST00000420453 U3KPZ7 1027 aaPredicted RBP13.89□□□□□ -0.19
LINC00993-201ENST00000420453 SLC4A2P04920 1241 aa13.82□□□□□ -0.2
LINC00993-201ENST00000420453 CAPN15O75808 1086 aa13.69□□□□□ -0.22
LINC00993-201ENST00000420453 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.65□□□□□ -0.22
LINC00993-201ENST00000420453 APLP2Q06481 763 aa13.65□□□□□ -0.22
LINC00993-201ENST00000420453 HNRNPUL2Q1KMD3 747 aaKnown RBP13.65□□□□□ -0.22
LINC00993-201ENST00000420453 SPINK5Q9NQ38 1064 aaPredicted RBP13.65□□□□□ -0.22
LINC00993-201ENST00000420453 SLC4A1APQ9BWU0 796 aaKnown RBP13.64□□□□□ -0.23
LINC00993-201ENST00000420453 SAMD1Q6SPF0 538 aaPredicted RBP13.56□□□□□ -0.24
LINC00993-201ENST00000420453 DSG3P32926 999 aa13.52□□□□□ -0.25
LINC00993-201ENST00000420453 TRHP20396 242 aaPredicted RBP13.5□□□□□ -0.25
LINC00993-201ENST00000420453 MYCNP04198 464 aaPredicted RBP13.49□□□□□ -0.25
LINC00993-201ENST00000420453 ZNF219Q9P2Y4 722 aaPredicted RBP13.48□□□□□ -0.25
LINC00993-201ENST00000420453 FOXD4L1Q9NU39 408 aa13.41□□□□□ -0.26
LINC00993-201ENST00000420453 ABCB7O75027 752 aa13.35□□□□□ -0.27
LINC00993-201ENST00000420453 ZBTB22O15209 634 aa13.16□□□□□ -0.3
LINC00993-201ENST00000420453 POLA2Q14181 598 aa13.15□□□□□ -0.3
LINC00993-201ENST00000420453 EHMT2Q96KQ7 1210 aa13.09□□□□□ -0.31
LINC00993-201ENST00000420453 ATF5Q9Y2D1 282 aaPredicted RBP13.08□□□□□ -0.32
LINC00993-201ENST00000420453 ATXN8OSP0DMR3 200 aa13□□□□□ -0.33
LINC00993-201ENST00000420453 RBM42Q9BTD8 480 aaKnown RBP12.97□□□□□ -0.33
LINC00993-201ENST00000420453 ZBTB12Q9Y330 459 aaPredicted RBP12.95□□□□□ -0.34
LINC00993-201ENST00000420453 CSRNP3Q8WYN3 585 aa12.84□□□□□ -0.35
LINC00993-201ENST00000420453 POTEHQ6S545 545 aa12.75□□□□□ -0.37
LINC00993-201ENST00000420453 FBLN2P98095 1184 aa12.7□□□□□ -0.38
LINC00993-201ENST00000420453 OSCARQ8IYS5 282 aa12.7□□□□□ -0.38
LINC00993-201ENST00000420453 AKT1S1Q96B36 256 aa12.68□□□□□ -0.38
LINC00993-201ENST00000420453 CHRDL2Q6WN34 429 aa12.59□□□□□ -0.39
LINC00993-201ENST00000420453 REM2Q8IYK8 340 aaPredicted RBP12.53□□□□□ -0.4
LINC00993-201ENST00000420453 SPDYE2BA6NHP3 402 aa12.52□□□□□ -0.41
LINC00993-201ENST00000420453 SPDYE6P0CI01 402 aa12.52□□□□□ -0.41
LINC00993-201ENST00000420453 SPDYE2Q495Y8 402 aa12.52□□□□□ -0.41
LINC00993-201ENST00000420453 MKRN4PQ13434 485 aaPredicted RBP12.49□□□□□ -0.41
LINC00993-201ENST00000420453 ZNF692Q9BU19 519 aaPredicted RBP12.41□□□□□ -0.42
LINC00993-201ENST00000420453 PITPNM1O00562 1244 aa12.38□□□□□ -0.43
LINC00993-201ENST00000420453 SSUH2Q9Y2M2 353 aa12.32□□□□□ -0.44
LINC00993-201ENST00000420453 PIP4P2Q8N4L2 257 aa12.3□□□□□ -0.44
LINC00993-201ENST00000420453 SPDYE1Q8NFV5 336 aaPredicted RBP12.29□□□□□ -0.44
LINC00993-201ENST00000420453 CLEC11AQ9Y240 323 aa12.26□□□□□ -0.45
LINC00993-201ENST00000420453 FXR2P51116 673 aaKnown RBP eCLIP12.25□□□□□ -0.45
LINC00993-201ENST00000420453 PABPN1Q86U42 306 aaKnown RBP eCLIP12.21□□□□□ -0.45
LINC00993-201ENST00000420453 HAX1O00165 279 aa12.1□□□□□ -0.47
LINC00993-201ENST00000420453 PRR29P0C7W0 189 aa12.09□□□□□ -0.47
LINC00993-201ENST00000420453 PRKAR2AP13861 404 aaKnown RBP12.09□□□□□ -0.47
LINC00993-201ENST00000420453 SPDYE4A6NLX3 237 aa12.05□□□□□ -0.48
LINC00993-201ENST00000420453 SP7Q8TDD2 431 aaPredicted RBP12.02□□□□□ -0.49
LINC00993-201ENST00000420453 STAG3Q9UJ98 1225 aa11.96□□□□□ -0.49
LINC00993-201ENST00000420453 CHADLQ6NUI6 762 aa11.95□□□□□ -0.5
LINC00993-201ENST00000420453 C19orf67A6NJJ6 358 aa11.85□□□□□ -0.51
LINC00993-201ENST00000420453 EVX2Q03828 476 aa11.85□□□□□ -0.51
LINC00993-201ENST00000420453 FARP1Q9Y4F1 1045 aaPredicted RBP11.82□□□□□ -0.52
LINC00993-201ENST00000420453 CREBZFQ9NS37 354 aa11.75□□□□□ -0.53
LINC00993-201ENST00000420453 CD44P16070 742 aaKnown RBP11.72□□□□□ -0.53
LINC00993-201ENST00000420453 PROM2Q8N271 834 aa11.71□□□□□ -0.53
LINC00993-201ENST00000420453 GABBR2O75899 941 aa11.65□□□□□ -0.54
LINC00993-201ENST00000420453 NPM1P06748 294 aaKnown RBP eCLIP11.63□□□□□ -0.55
LINC00993-201ENST00000420453 PAK3O75914 559 aaPredicted RBP11.59□□□□□ -0.55
LINC00993-201ENST00000420453 CLCN6P51797 869 aa11.59□□□□□ -0.55
LINC00993-201ENST00000420453 ZRANB1Q9UGI0 708 aa11.59□□□□□ -0.55
LINC00993-201ENST00000420453 FKBP8Q14318 412 aa11.58□□□□□ -0.56
LINC00993-201ENST00000420453 PLEKHG5O94827 1062 aa11.57□□□□□ -0.56
LINC00993-201ENST00000420453 MNX1P50219 401 aaPredicted RBP11.53□□□□□ -0.56
LINC00993-201ENST00000420453 ZNF579Q8NAF0 562 aaKnown RBP11.53□□□□□ -0.56
LINC00993-201ENST00000420453 MIER1Q8N108 512 aa11.51□□□□□ -0.57
LINC00993-201ENST00000420453 PLCD3Q8N3E9 789 aa11.45□□□□□ -0.58
LINC00993-201ENST00000420453 DCBLD2Q96PD2 775 aa11.43□□□□□ -0.58
LINC00993-201ENST00000420453 PHF12Q96QT6 1004 aa11.4□□□□□ -0.58
LINC00993-201ENST00000420453 TSPYL2Q9H2G4 693 aaPredicted RBP11.38□□□□□ -0.59
LINC00993-201ENST00000420453 ZBTB47Q9UFB7 747 aaPredicted RBP11.38□□□□□ -0.59
LINC00993-201ENST00000420453 FBXO3Q9UK99 471 aa11.37□□□□□ -0.59
LINC00993-201ENST00000420453 GALR2O43603 387 aaPredicted RBP11.36□□□□□ -0.59
LINC00993-201ENST00000420453 POTEIP0CG38 1075 aa11.34□□□□□ -0.59
LINC00993-201ENST00000420453 NISCHQ9Y2I1 1504 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms