RNA–Protein interactions for RNA: ENST00000459742.1

AC007000.3-201, humanhuman

TSL 3 BASIC

Gene AC007000.3, Length 617 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007000.3-201ENST00000459742 AEBP2Q6ZN18 517 aaPredicted RBP24.31■■□□□ 1.48
AC007000.3-201ENST00000459742 CHIC1Q5VXU3 224 aa23.25■■□□□ 1.31
AC007000.3-201ENST00000459742 SENP3Q9H4L4 574 aaPredicted RBP20.73■□□□□ 0.91
AC007000.3-201ENST00000459742 PHF23Q9BUL5 403 aaPredicted RBP20.47■□□□□ 0.87
AC007000.3-201ENST00000459742 FOXD1Q16676 465 aa19.29■□□□□ 0.68
AC007000.3-201ENST00000459742 PLPPR3Q6T4P5 718 aa18.64■□□□□ 0.57
AC007000.3-201ENST00000459742 PPP6R1Q9UPN7 881 aa18.14■□□□□ 0.49
AC007000.3-201ENST00000459742 ADRA2BP18089 450 aa18.09■□□□□ 0.49
AC007000.3-201ENST00000459742 PIAS4Q8N2W9 510 aaPredicted RBP18.06■□□□□ 0.48
AC007000.3-201ENST00000459742 MSH5O43196 834 aa18.02■□□□□ 0.48
AC007000.3-201ENST00000459742 POTEDQ86YR6 584 aa17.32■□□□□ 0.36
AC007000.3-201ENST00000459742 SCAF1Q9H7N4 1312 aaKnown RBP16.58■□□□□ 0.24
AC007000.3-201ENST00000459742 MAPK8IP2Q13387 824 aaPredicted RBP16.56■□□□□ 0.24
AC007000.3-201ENST00000459742 DMRT2Q9Y5R5 561 aa16.47■□□□□ 0.23
AC007000.3-201ENST00000459742 PPP4R3CPQ6ZMV5 832 aa16.35■□□□□ 0.21
AC007000.3-201ENST00000459742 CNKSR2Q8WXI2 1034 aa16.03■□□□□ 0.16
AC007000.3-201ENST00000459742 HOXD11P31277 338 aaPredicted RBP15.93■□□□□ 0.14
AC007000.3-201ENST00000459742 RNF216Q9NWF9 866 aaPredicted RBP15.85■□□□□ 0.13
AC007000.3-201ENST00000459742 NCBP3Q53F19 620 aaKnown RBP15.77■□□□□ 0.12
AC007000.3-201ENST00000459742 DCAF8L1A6NGE4 600 aa15.73■□□□□ 0.11
AC007000.3-201ENST00000459742 NPM3O75607 178 aaKnown RBP15.53■□□□□ 0.08
AC007000.3-201ENST00000459742 DNAJC5BQ9UF47 199 aa15.39■□□□□ 0.05
AC007000.3-201ENST00000459742 RNF39Q9H2S5 420 aa15.38■□□□□ 0.05
AC007000.3-201ENST00000459742 KCNA4P22459 653 aa15.36■□□□□ 0.05
AC007000.3-201ENST00000459742 CACNB1Q02641 598 aaPredicted RBP15.35■□□□□ 0.05
AC007000.3-201ENST00000459742 C1QBPQ07021 282 aaKnown RBP15.17■□□□□ 0.02
AC007000.3-201ENST00000459742 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.14■□□□□ 0.01
AC007000.3-201ENST00000459742 U3KPZ7 1027 aaPredicted RBP14.86□□□□□ -0.03
AC007000.3-201ENST00000459742 SLC4A2P04920 1241 aa14.8□□□□□ -0.04
AC007000.3-201ENST00000459742 SPINK5Q9NQ38 1064 aaPredicted RBP14.58□□□□□ -0.08
AC007000.3-201ENST00000459742 CAPN15O75808 1086 aa14.54□□□□□ -0.08
AC007000.3-201ENST00000459742 SLC4A1APQ9BWU0 796 aaKnown RBP14.53□□□□□ -0.08
AC007000.3-201ENST00000459742 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.5□□□□□ -0.09
AC007000.3-201ENST00000459742 HNRNPUL2Q1KMD3 747 aaKnown RBP14.5□□□□□ -0.09
AC007000.3-201ENST00000459742 APLP2Q06481 763 aa14.48□□□□□ -0.09
AC007000.3-201ENST00000459742 DSG3P32926 999 aa14.45□□□□□ -0.1
AC007000.3-201ENST00000459742 SAMD1Q6SPF0 538 aaPredicted RBP14.42□□□□□ -0.1
AC007000.3-201ENST00000459742 MYCNP04198 464 aaPredicted RBP14.38□□□□□ -0.11
AC007000.3-201ENST00000459742 ZNF219Q9P2Y4 722 aaPredicted RBP14.36□□□□□ -0.11
AC007000.3-201ENST00000459742 TRHP20396 242 aaPredicted RBP14.34□□□□□ -0.11
AC007000.3-201ENST00000459742 FOXD4L1Q9NU39 408 aa14.3□□□□□ -0.12
AC007000.3-201ENST00000459742 ABCB7O75027 752 aa14.21□□□□□ -0.13
AC007000.3-201ENST00000459742 ZBTB22O15209 634 aa14.11□□□□□ -0.15
AC007000.3-201ENST00000459742 POLA2Q14181 598 aa14.01□□□□□ -0.17
AC007000.3-201ENST00000459742 ATF5Q9Y2D1 282 aaPredicted RBP14.01□□□□□ -0.17
AC007000.3-201ENST00000459742 ATXN8OSP0DMR3 200 aa13.87□□□□□ -0.19
AC007000.3-201ENST00000459742 RBM42Q9BTD8 480 aaKnown RBP13.8□□□□□ -0.2
AC007000.3-201ENST00000459742 ZBTB12Q9Y330 459 aaPredicted RBP13.76□□□□□ -0.21
AC007000.3-201ENST00000459742 CSRNP3Q8WYN3 585 aa13.61□□□□□ -0.23
AC007000.3-201ENST00000459742 POTEHQ6S545 545 aa13.6□□□□□ -0.23
AC007000.3-201ENST00000459742 OSCARQ8IYS5 282 aa13.55□□□□□ -0.24
AC007000.3-201ENST00000459742 AKT1S1Q96B36 256 aa13.51□□□□□ -0.25
AC007000.3-201ENST00000459742 FBLN2P98095 1184 aa13.47□□□□□ -0.25
AC007000.3-201ENST00000459742 EHMT2Q96KQ7 1210 aa13.47□□□□□ -0.25
AC007000.3-201ENST00000459742 CHRDL2Q6WN34 429 aa13.42□□□□□ -0.26
AC007000.3-201ENST00000459742 MKRN4PQ13434 485 aaPredicted RBP13.38□□□□□ -0.27
AC007000.3-201ENST00000459742 REM2Q8IYK8 340 aaPredicted RBP13.37□□□□□ -0.27
AC007000.3-201ENST00000459742 SPDYE2BA6NHP3 402 aa13.34□□□□□ -0.27
AC007000.3-201ENST00000459742 SPDYE6P0CI01 402 aa13.34□□□□□ -0.27
AC007000.3-201ENST00000459742 SPDYE2Q495Y8 402 aa13.34□□□□□ -0.27
AC007000.3-201ENST00000459742 PITPNM1O00562 1244 aa13.22□□□□□ -0.29
AC007000.3-201ENST00000459742 ZNF692Q9BU19 519 aaPredicted RBP13.19□□□□□ -0.3
AC007000.3-201ENST00000459742 SSUH2Q9Y2M2 353 aa13.18□□□□□ -0.3
AC007000.3-201ENST00000459742 PIP4P2Q8N4L2 257 aa13.13□□□□□ -0.31
AC007000.3-201ENST00000459742 FXR2P51116 673 aaKnown RBP eCLIP13.09□□□□□ -0.31
AC007000.3-201ENST00000459742 SPDYE1Q8NFV5 336 aaPredicted RBP13.07□□□□□ -0.32
AC007000.3-201ENST00000459742 CLEC11AQ9Y240 323 aa13.01□□□□□ -0.33
AC007000.3-201ENST00000459742 PABPN1Q86U42 306 aaKnown RBP eCLIP13□□□□□ -0.33
AC007000.3-201ENST00000459742 PRKAR2AP13861 404 aaKnown RBP12.88□□□□□ -0.35
AC007000.3-201ENST00000459742 HAX1O00165 279 aa12.84□□□□□ -0.35
AC007000.3-201ENST00000459742 PRR29P0C7W0 189 aa12.84□□□□□ -0.35
AC007000.3-201ENST00000459742 SP7Q8TDD2 431 aaPredicted RBP12.83□□□□□ -0.36
AC007000.3-201ENST00000459742 SPDYE4A6NLX3 237 aa12.82□□□□□ -0.36
AC007000.3-201ENST00000459742 CHADLQ6NUI6 762 aa12.74□□□□□ -0.37
AC007000.3-201ENST00000459742 EVX2Q03828 476 aa12.69□□□□□ -0.38
AC007000.3-201ENST00000459742 STAG3Q9UJ98 1225 aa12.69□□□□□ -0.38
AC007000.3-201ENST00000459742 C19orf67A6NJJ6 358 aa12.67□□□□□ -0.38
AC007000.3-201ENST00000459742 FARP1Q9Y4F1 1045 aaPredicted RBP12.6□□□□□ -0.39
AC007000.3-201ENST00000459742 PROM2Q8N271 834 aa12.56□□□□□ -0.4
AC007000.3-201ENST00000459742 CREBZFQ9NS37 354 aa12.56□□□□□ -0.4
AC007000.3-201ENST00000459742 CD44P16070 742 aaKnown RBP12.48□□□□□ -0.41
AC007000.3-201ENST00000459742 GABBR2O75899 941 aa12.43□□□□□ -0.42
AC007000.3-201ENST00000459742 MNX1P50219 401 aaPredicted RBP12.36□□□□□ -0.43
AC007000.3-201ENST00000459742 NPM1P06748 294 aaKnown RBP eCLIP12.34□□□□□ -0.43
AC007000.3-201ENST00000459742 CLCN6P51797 869 aa12.33□□□□□ -0.44
AC007000.3-201ENST00000459742 FKBP8Q14318 412 aa12.32□□□□□ -0.44
AC007000.3-201ENST00000459742 ZRANB1Q9UGI0 708 aa12.32□□□□□ -0.44
AC007000.3-201ENST00000459742 ZNF579Q8NAF0 562 aaKnown RBP12.31□□□□□ -0.44
AC007000.3-201ENST00000459742 PAK3O75914 559 aaPredicted RBP12.26□□□□□ -0.45
AC007000.3-201ENST00000459742 PLEKHG5O94827 1062 aa12.2□□□□□ -0.46
AC007000.3-201ENST00000459742 MIER1Q8N108 512 aa12.2□□□□□ -0.46
AC007000.3-201ENST00000459742 POTEIP0CG38 1075 aa12.16□□□□□ -0.46
AC007000.3-201ENST00000459742 PHF12Q96QT6 1004 aa12.15□□□□□ -0.46
AC007000.3-201ENST00000459742 GALR2O43603 387 aaPredicted RBP12.13□□□□□ -0.47
AC007000.3-201ENST00000459742 PLCD3Q8N3E9 789 aa12.13□□□□□ -0.47
AC007000.3-201ENST00000459742 DCBLD2Q96PD2 775 aa12.13□□□□□ -0.47
AC007000.3-201ENST00000459742 TSPYL2Q9H2G4 693 aaPredicted RBP12.09□□□□□ -0.47
AC007000.3-201ENST00000459742 ZBTB47Q9UFB7 747 aaPredicted RBP12.06□□□□□ -0.48
AC007000.3-201ENST00000459742 CCDC61Q9Y6R9 512 aa12.06□□□□□ -0.48
AC007000.3-201ENST00000459742 FBXO3Q9UK99 471 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms