RNA–Protein interactions for RNA: ENST00000634931.1

SMARCA2-231, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 5 BASIC

Gene SMARCA2, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-231	ENST00000634931	AEBP2	Q6ZN18	517 aa	Predicted RBP	23.09	■■□□□ 1.29
SMARCA2-231	ENST00000634931	CHIC1	Q5VXU3	224 aa		22.77	■■□□□ 1.24
SMARCA2-231	ENST00000634931	PHF23	Q9BUL5	403 aa	Predicted RBP	20.1	■□□□□ 0.81
SMARCA2-231	ENST00000634931	SENP3	Q9H4L4	574 aa	Predicted RBP	19.89	■□□□□ 0.77
SMARCA2-231	ENST00000634931	PLPPR3	Q6T4P5	718 aa		18.76	■□□□□ 0.59
SMARCA2-231	ENST00000634931	FOXD1	Q16676	465 aa		18.51	■□□□□ 0.55
SMARCA2-231	ENST00000634931	POTED	Q86YR6	584 aa		17.85	■□□□□ 0.45
SMARCA2-231	ENST00000634931	ADRA2B	P18089	450 aa		17.6	■□□□□ 0.41
SMARCA2-231	ENST00000634931	MSH5	O43196	834 aa		17.59	■□□□□ 0.41
SMARCA2-231	ENST00000634931	PPP6R1	Q9UPN7	881 aa		17.53	■□□□□ 0.4
SMARCA2-231	ENST00000634931	PIAS4	Q8N2W9	510 aa	Predicted RBP	17.29	■□□□□ 0.36
SMARCA2-231	ENST00000634931	KCNA4	P22459	653 aa		16.96	■□□□□ 0.31
SMARCA2-231	ENST00000634931	PPP4R3CP	Q6ZMV5	832 aa		16.63	■□□□□ 0.25
SMARCA2-231	ENST00000634931	EHMT2	Q96KQ7	1210 aa		16.55	■□□□□ 0.24
SMARCA2-231	ENST00000634931	NCBP3	Q53F19	620 aa	Known RBP	16.36	■□□□□ 0.21
SMARCA2-231	ENST00000634931	SLC4A1AP	Q9BWU0	796 aa	Known RBP	16.26	■□□□□ 0.19
SMARCA2-231	ENST00000634931	NPM3	O75607	178 aa	Known RBP	16.13	■□□□□ 0.17
SMARCA2-231	ENST00000634931	SCAF1	Q9H7N4	1312 aa	Known RBP	16.04	■□□□□ 0.16
SMARCA2-231	ENST00000634931	CSRNP3	Q8WYN3	585 aa		16.02	■□□□□ 0.16
SMARCA2-231	ENST00000634931	CNKSR2	Q8WXI2	1034 aa		16	■□□□□ 0.15
SMARCA2-231	ENST00000634931	MAPK8IP2	Q13387	824 aa	Predicted RBP	15.77	■□□□□ 0.12
SMARCA2-231	ENST00000634931	DMRT2	Q9Y5R5	561 aa		15.65	■□□□□ 0.1
SMARCA2-231	ENST00000634931	ZBTB22	O15209	634 aa		15.61	■□□□□ 0.09
SMARCA2-231	ENST00000634931	RNF216	Q9NWF9	866 aa	Predicted RBP	15.53	■□□□□ 0.08
SMARCA2-231	ENST00000634931	DNAJC5B	Q9UF47	199 aa		15.49	■□□□□ 0.07
SMARCA2-231	ENST00000634931	FOXD4L1	Q9NU39	408 aa		15.41	■□□□□ 0.06
SMARCA2-231	ENST00000634931	CACNB1	Q02641	598 aa	Predicted RBP	15.39	■□□□□ 0.05
SMARCA2-231	ENST00000634931	HOXD11	P31277	338 aa	Predicted RBP	15.3	■□□□□ 0.04
SMARCA2-231	ENST00000634931	DCAF8L1	A6NGE4	600 aa		15.19	■□□□□ 0.02
SMARCA2-231	ENST00000634931	SLC4A2	P04920	1241 aa		15.08	■□□□□ 0
SMARCA2-231	ENST00000634931	RNF39	Q9H2S5	420 aa		14.9	□□□□□ -0.02
SMARCA2-231	ENST00000634931	MYCN	P04198	464 aa	Predicted RBP	14.89	□□□□□ -0.03
SMARCA2-231	ENST00000634931	ATXN8OS	P0DMR3	200 aa		14.78	□□□□□ -0.04
SMARCA2-231	ENST00000634931	C1QBP	Q07021	282 aa	Known RBP	14.7	□□□□□ -0.06
SMARCA2-231	ENST00000634931	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	14.63	□□□□□ -0.07
SMARCA2-231	ENST00000634931	FKBP8	Q14318	412 aa		14.47	□□□□□ -0.09
SMARCA2-231	ENST00000634931	ATF5	Q9Y2D1	282 aa	Predicted RBP	14.47	□□□□□ -0.09
SMARCA2-231	ENST00000634931		U3KPZ7	1027 aa	Predicted RBP	14.46	□□□□□ -0.09
SMARCA2-231	ENST00000634931	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	14.44	□□□□□ -0.1
SMARCA2-231	ENST00000634931	HNRNPUL2	Q1KMD3	747 aa	Known RBP	14.44	□□□□□ -0.1
SMARCA2-231	ENST00000634931	SAMD1	Q6SPF0	538 aa	Predicted RBP	14.44	□□□□□ -0.1
SMARCA2-231	ENST00000634931	RTN4	Q9NQC3	1192 aa	Known RBP	14.26	□□□□□ -0.13
SMARCA2-231	ENST00000634931	AMER1	Q5JTC6	1135 aa	Predicted RBP	14.24	□□□□□ -0.13
SMARCA2-231	ENST00000634931	ZNF219	Q9P2Y4	722 aa	Predicted RBP	14.16	□□□□□ -0.14
SMARCA2-231	ENST00000634931	APLP2	Q06481	763 aa		14.15	□□□□□ -0.14
SMARCA2-231	ENST00000634931	POTEH	Q6S545	545 aa		13.94	□□□□□ -0.18
SMARCA2-231	ENST00000634931	TRH	P20396	242 aa	Predicted RBP	13.9	□□□□□ -0.18
SMARCA2-231	ENST00000634931	CAPN15	O75808	1086 aa		13.89	□□□□□ -0.19
SMARCA2-231	ENST00000634931	SLC24A1	O60721	1099 aa		13.88	□□□□□ -0.19
SMARCA2-231	ENST00000634931	SPINK5	Q9NQ38	1064 aa	Predicted RBP	13.88	□□□□□ -0.19
SMARCA2-231	ENST00000634931	MKRN4P	Q13434	485 aa	Predicted RBP	13.86	□□□□□ -0.19
SMARCA2-231	ENST00000634931	SPDYE4	A6NLX3	237 aa		13.85	□□□□□ -0.19
SMARCA2-231	ENST00000634931	FBLN2	P98095	1184 aa		13.81	□□□□□ -0.2
SMARCA2-231	ENST00000634931	DSG3	P32926	999 aa		13.8	□□□□□ -0.2
SMARCA2-231	ENST00000634931	POLA2	Q14181	598 aa		13.78	□□□□□ -0.2
SMARCA2-231	ENST00000634931	FBXO3	Q9UK99	471 aa		13.74	□□□□□ -0.21
SMARCA2-231	ENST00000634931	PROM2	Q8N271	834 aa		13.66	□□□□□ -0.22
SMARCA2-231	ENST00000634931	ABCB7	O75027	752 aa		13.62	□□□□□ -0.23
SMARCA2-231	ENST00000634931	ZBTB12	Q9Y330	459 aa	Predicted RBP	13.58	□□□□□ -0.24
SMARCA2-231	ENST00000634931	VASP	P50552	380 aa	Predicted RBP	13.57	□□□□□ -0.24
SMARCA2-231	ENST00000634931	IFNLR1	Q8IU57	520 aa	Predicted RBP	13.42	□□□□□ -0.26
SMARCA2-231	ENST00000634931	ZNF692	Q9BU19	519 aa	Predicted RBP	13.33	□□□□□ -0.28
SMARCA2-231	ENST00000634931	OSCAR	Q8IYS5	282 aa		13.31	□□□□□ -0.28
SMARCA2-231	ENST00000634931	RBM42	Q9BTD8	480 aa	Known RBP	13.29	□□□□□ -0.28
SMARCA2-231	ENST00000634931	SPDYE2B	A6NHP3	402 aa		13.26	□□□□□ -0.29
SMARCA2-231	ENST00000634931	SPDYE6	P0CI01	402 aa		13.26	□□□□□ -0.29
SMARCA2-231	ENST00000634931	SPDYE2	Q495Y8	402 aa		13.26	□□□□□ -0.29
SMARCA2-231	ENST00000634931	DCAF8L2	P0C7V8	631 aa		13.25	□□□□□ -0.29
SMARCA2-231	ENST00000634931	SSUH2	Q9Y2M2	353 aa		13.23	□□□□□ -0.29
SMARCA2-231	ENST00000634931	KLHL34	Q8N239	644 aa		13.22	□□□□□ -0.29
SMARCA2-231	ENST00000634931	PKD2	Q13563	968 aa		13.21	□□□□□ -0.29
SMARCA2-231	ENST00000634931	STAG3	Q9UJ98	1225 aa		13.2	□□□□□ -0.3
SMARCA2-231	ENST00000634931	PABPN1	Q86U42	306 aa	Known RBP eCLIP	13.18	□□□□□ -0.3
SMARCA2-231	ENST00000634931	SPOCK2	Q92563	424 aa		13.17	□□□□□ -0.3
SMARCA2-231	ENST00000634931	PLCB2	Q00722	1185 aa		13.15	□□□□□ -0.3
SMARCA2-231	ENST00000634931	PLCD3	Q8N3E9	789 aa		13.14	□□□□□ -0.31
SMARCA2-231	ENST00000634931	CHRDL2	Q6WN34	429 aa		13.13	□□□□□ -0.31
SMARCA2-231	ENST00000634931	MIER1	Q8N108	512 aa		13.07	□□□□□ -0.32
SMARCA2-231	ENST00000634931	ECM2	O94769	699 aa	Predicted RBP	13.04	□□□□□ -0.32
SMARCA2-231	ENST00000634931	HAP1	P54257	671 aa	Predicted RBP	13.01	□□□□□ -0.33
SMARCA2-231	ENST00000634931	PLEKHG5	O94827	1062 aa		12.94	□□□□□ -0.34
SMARCA2-231	ENST00000634931	RGL2	O15211	777 aa		12.9	□□□□□ -0.34
SMARCA2-231	ENST00000634931	ZBTB47	Q9UFB7	747 aa	Predicted RBP	12.9	□□□□□ -0.34
SMARCA2-231	ENST00000634931	CIZ1	Q9ULV3	898 aa	Predicted RBP	12.89	□□□□□ -0.35
SMARCA2-231	ENST00000634931	NPM1	P06748	294 aa	Known RBP eCLIP	12.87	□□□□□ -0.35
SMARCA2-231	ENST00000634931	BBX	Q8WY36	941 aa	Predicted RBP	12.87	□□□□□ -0.35
SMARCA2-231	ENST00000634931	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	12.87	□□□□□ -0.35
SMARCA2-231	ENST00000634931	SP7	Q8TDD2	431 aa	Predicted RBP	12.86	□□□□□ -0.35
SMARCA2-231	ENST00000634931	AKT1S1	Q96B36	256 aa		12.83	□□□□□ -0.36
SMARCA2-231	ENST00000634931	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	12.79	□□□□□ -0.36
SMARCA2-231	ENST00000634931	VSIG10	Q8N0Z9	540 aa		12.77	□□□□□ -0.37
SMARCA2-231	ENST00000634931	CFAP44	Q96MT7	982 aa		12.77	□□□□□ -0.37
SMARCA2-231	ENST00000634931	SPDYE1	Q8NFV5	336 aa	Predicted RBP	12.74	□□□□□ -0.37
SMARCA2-231	ENST00000634931	TRIM41	Q8WV44	630 aa		12.73	□□□□□ -0.37
SMARCA2-231	ENST00000634931	CHGA	P10645	457 aa	Known RBP	12.72	□□□□□ -0.37
SMARCA2-231	ENST00000634931	REM2	Q8IYK8	340 aa	Predicted RBP	12.7	□□□□□ -0.38
SMARCA2-231	ENST00000634931	PIP4P2	Q8N4L2	257 aa		12.69	□□□□□ -0.38
SMARCA2-231	ENST00000634931	CLEC11A	Q9Y240	323 aa		12.69	□□□□□ -0.38
SMARCA2-231	ENST00000634931	GSE1	Q14687	1217 aa		12.68	□□□□□ -0.38
SMARCA2-231	ENST00000634931	SPRYD3	Q8NCJ5	442 aa		12.68	□□□□□ -0.38

Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms