RNA–Protein interactions for RNA: ENST00000535728.5

SPOCK3-225, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPOCK3, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-225ENST00000535728 POTEDQ86YR6 584 aa15.06■□□□□ 0
SPOCK3-225ENST00000535728 AEBP2Q6ZN18 517 aaPredicted RBP12.44□□□□□ -0.42
SPOCK3-225ENST00000535728 CHIC1Q5VXU3 224 aa12.03□□□□□ -0.48
SPOCK3-225ENST00000535728 SENP3Q9H4L4 574 aaPredicted RBP11.28□□□□□ -0.6
SPOCK3-225ENST00000535728 POTEHQ6S545 545 aa11.27□□□□□ -0.61
SPOCK3-225ENST00000535728 MSH5O43196 834 aa10.75□□□□□ -0.69
SPOCK3-225ENST00000535728 CACNB1Q02641 598 aaPredicted RBP10.75□□□□□ -0.69
SPOCK3-225ENST00000535728 PHF23Q9BUL5 403 aaPredicted RBP10.69□□□□□ -0.7
SPOCK3-225ENST00000535728 PLSCR2Q9NRY7 297 aa10.48□□□□□ -0.73
SPOCK3-225ENST00000535728 FOXD1Q16676 465 aa10.45□□□□□ -0.74
SPOCK3-225ENST00000535728 PIAS4Q8N2W9 510 aaPredicted RBP9.46□□□□□ -0.9
SPOCK3-225ENST00000535728 NISCHQ9Y2I1 1504 aa9.36□□□□□ -0.91
SPOCK3-225ENST00000535728 SP7Q8TDD2 431 aaPredicted RBP9.24□□□□□ -0.93
SPOCK3-225ENST00000535728 PLPPR3Q6T4P5 718 aa9.14□□□□□ -0.95
SPOCK3-225ENST00000535728 RNF39Q9H2S5 420 aa8.83□□□□□ -1
SPOCK3-225ENST00000535728 C1QBPQ07021 282 aaKnown RBP8.76□□□□□ -1.01
SPOCK3-225ENST00000535728 PELP1Q8IZL8 1130 aaKnown RBP8.76□□□□□ -1.01
SPOCK3-225ENST00000535728 MYT1Q01538 1121 aa8.67□□□□□ -1.02
SPOCK3-225ENST00000535728 ADRA2BP18089 450 aa8.64□□□□□ -1.03
SPOCK3-225ENST00000535728 PCDH10Q9P2E7 1040 aa8.63□□□□□ -1.03
SPOCK3-225ENST00000535728 LHX8Q68G74 356 aa8.62□□□□□ -1.03
SPOCK3-225ENST00000535728 DMRT2Q9Y5R5 561 aa8.6□□□□□ -1.03
SPOCK3-225ENST00000535728 PPP6R1Q9UPN7 881 aa8.59□□□□□ -1.03
SPOCK3-225ENST00000535728 TTBK1Q5TCY1 1321 aaPredicted RBP8.37□□□□□ -1.07
SPOCK3-225ENST00000535728 DCAF8L1A6NGE4 600 aa8.27□□□□□ -1.09
SPOCK3-225ENST00000535728 POTEMA6NI47 508 aa8.22□□□□□ -1.09
SPOCK3-225ENST00000535728 EHMT2Q96KQ7 1210 aa8.21□□□□□ -1.1
SPOCK3-225ENST00000535728 KCNA4P22459 653 aa8.19□□□□□ -1.1
SPOCK3-225ENST00000535728 POTEGQ6S5H5 508 aa8.08□□□□□ -1.12
SPOCK3-225ENST00000535728 CCDC180Q9P1Z9 1646 aa8.07□□□□□ -1.12
SPOCK3-225ENST00000535728 SCAF1Q9H7N4 1312 aaKnown RBP8.05□□□□□ -1.12
SPOCK3-225ENST00000535728 MAPK8IP2Q13387 824 aaPredicted RBP8.02□□□□□ -1.13
SPOCK3-225ENST00000535728 PPP4R3CPQ6ZMV5 832 aa8.01□□□□□ -1.13
SPOCK3-225ENST00000535728 PRKCSHP14314 528 aaPredicted RBP8□□□□□ -1.13
SPOCK3-225ENST00000535728 HRCP23327 699 aa8□□□□□ -1.13
SPOCK3-225ENST00000535728 ERICH6Q7L0X2 663 aa7.95□□□□□ -1.14
SPOCK3-225ENST00000535728 DNAJC5BQ9UF47 199 aa7.94□□□□□ -1.14
SPOCK3-225ENST00000535728 CHRDL2Q6WN34 429 aa7.92□□□□□ -1.14
SPOCK3-225ENST00000535728 APLP2Q06481 763 aa7.91□□□□□ -1.14
SPOCK3-225ENST00000535728 NCBP3Q53F19 620 aaKnown RBP7.9□□□□□ -1.15
SPOCK3-225ENST00000535728 ZCCHC6Q5VYS8 1495 aaKnown RBP7.89□□□□□ -1.15
SPOCK3-225ENST00000535728 SLC24A1O60721 1099 aa7.86□□□□□ -1.15
SPOCK3-225ENST00000535728 SHROOM4Q9ULL8 1493 aa7.82□□□□□ -1.16
SPOCK3-225ENST00000535728 CNKSR2Q8WXI2 1034 aa7.82□□□□□ -1.16
SPOCK3-225ENST00000535728 CSRNP3Q8WYN3 585 aa7.81□□□□□ -1.16
SPOCK3-225ENST00000535728 BCL11AQ9H165 835 aa7.81□□□□□ -1.16
SPOCK3-225ENST00000535728 SLC4A1APQ9BWU0 796 aaKnown RBP7.8□□□□□ -1.16
SPOCK3-225ENST00000535728 DCAF8L2P0C7V8 631 aa7.76□□□□□ -1.17
SPOCK3-225ENST00000535728 MYO15BQ96JP2 1530 aa7.75□□□□□ -1.17
SPOCK3-225ENST00000535728 DCAF1Q9Y4B6 1507 aa7.7□□□□□ -1.18
SPOCK3-225ENST00000535728 HAX1O00165 279 aa7.69□□□□□ -1.18
SPOCK3-225ENST00000535728 FAM9AQ8IZU1 332 aaPredicted RBP7.69□□□□□ -1.18
SPOCK3-225ENST00000535728 NPM3O75607 178 aaKnown RBP7.66□□□□□ -1.18
SPOCK3-225ENST00000535728 PPARGC1BQ86YN6 1023 aaKnown RBP7.66□□□□□ -1.18
SPOCK3-225ENST00000535728 RBM42Q9BTD8 480 aaKnown RBP7.66□□□□□ -1.18
SPOCK3-225ENST00000535728 DSG3P32926 999 aa7.66□□□□□ -1.18
SPOCK3-225ENST00000535728 RNF216Q9NWF9 866 aaPredicted RBP7.66□□□□□ -1.18
SPOCK3-225ENST00000535728 HOXD11P31277 338 aaPredicted RBP7.63□□□□□ -1.19
SPOCK3-225ENST00000535728 CENPBP07199 599 aaPredicted RBP7.62□□□□□ -1.19
SPOCK3-225ENST00000535728 DNAJC5Q9H3Z4 198 aa7.62□□□□□ -1.19
SPOCK3-225ENST00000535728 SUPT5HO00267 1087 aaKnown RBP7.61□□□□□ -1.19
SPOCK3-225ENST00000535728 DAXXQ9UER7 740 aaPredicted RBP7.59□□□□□ -1.19
SPOCK3-225ENST00000535728 ZBTB22O15209 634 aa7.57□□□□□ -1.2
SPOCK3-225ENST00000535728 ABCC9O60706 1549 aa7.56□□□□□ -1.2
SPOCK3-225ENST00000535728 PCGF6Q9BYE7 350 aa7.56□□□□□ -1.2
SPOCK3-225ENST00000535728 ACIN1Q9UKV3 1341 aaKnown RBP7.52□□□□□ -1.21
SPOCK3-225ENST00000535728 SCRIBQ14160 1630 aa7.5□□□□□ -1.21
SPOCK3-225ENST00000535728 NACADO15069 1562 aa7.47□□□□□ -1.21
SPOCK3-225ENST00000535728 ANP32EQ9BTT0 268 aa7.45□□□□□ -1.22
SPOCK3-225ENST00000535728 GTF3C3Q9Y5Q9 886 aa7.42□□□□□ -1.22
SPOCK3-225ENST00000535728 ZEB1P37275 1124 aaPredicted RBP7.42□□□□□ -1.22
SPOCK3-225ENST00000535728 EIF5BO60841 1220 aaKnown RBP7.41□□□□□ -1.22
SPOCK3-225ENST00000535728 NEUROD1Q13562 356 aa7.4□□□□□ -1.23
SPOCK3-225ENST00000535728 RB1CC1Q8TDY2 1594 aa7.39□□□□□ -1.23
SPOCK3-225ENST00000535728 CAPN15O75808 1086 aa7.38□□□□□ -1.23
SPOCK3-225ENST00000535728 LOC105371045A0A1W2PR82 267 aa7.37□□□□□ -1.23
SPOCK3-225ENST00000535728 UNC13AQ9UPW8 1703 aa7.34□□□□□ -1.23
SPOCK3-225ENST00000535728 RSF1Q96T23 1441 aaPredicted RBP7.33□□□□□ -1.24
SPOCK3-225ENST00000535728 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.32□□□□□ -1.24
SPOCK3-225ENST00000535728 CECR2Q9BXF3 1484 aa7.31□□□□□ -1.24
SPOCK3-225ENST00000535728 PIP4P2Q8N4L2 257 aa7.31□□□□□ -1.24
SPOCK3-225ENST00000535728 UBE2Q2Q8WVN8 375 aa7.31□□□□□ -1.24
SPOCK3-225ENST00000535728 FOXD4L1Q9NU39 408 aa7.3□□□□□ -1.24
SPOCK3-225ENST00000535728 TRIM26Q12899 539 aaPredicted RBP7.3□□□□□ -1.24
SPOCK3-225ENST00000535728 MROH2BQ7Z745 1585 aa7.27□□□□□ -1.25
SPOCK3-225ENST00000535728 MMRN1Q13201 1228 aa7.26□□□□□ -1.25
SPOCK3-225ENST00000535728 WIZO95785 1651 aa7.25□□□□□ -1.25
SPOCK3-225ENST00000535728 RTN4Q9NQC3 1192 aaKnown RBP7.22□□□□□ -1.25
SPOCK3-225ENST00000535728 BICRAQ9NZM4 1560 aa7.21□□□□□ -1.25
SPOCK3-225ENST00000535728 ANO8Q9HCE9 1232 aaPredicted RBP7.2□□□□□ -1.26
SPOCK3-225ENST00000535728 BAZ1AQ9NRL2 1556 aaPredicted RBP7.2□□□□□ -1.26
SPOCK3-225ENST00000535728 CDAN1Q8IWY9 1227 aa7.2□□□□□ -1.26
SPOCK3-225ENST00000535728 SLC4A2P04920 1241 aa7.19□□□□□ -1.26
SPOCK3-225ENST00000535728 PABPN1Q86U42 306 aaKnown RBP eCLIP7.18□□□□□ -1.26
SPOCK3-225ENST00000535728 SMARCA4P51532 1647 aa7.18□□□□□ -1.26
SPOCK3-225ENST00000535728 EVX2Q03828 476 aa7.18□□□□□ -1.26
SPOCK3-225ENST00000535728 LOC100996750A0A140TA64 210 aa7.17□□□□□ -1.26
SPOCK3-225ENST00000535728 GABBR2O75899 941 aa7.17□□□□□ -1.26
SPOCK3-225ENST00000535728 KRTAP4-6Q9BYQ5 205 aa7.17□□□□□ -1.26
SPOCK3-225ENST00000535728 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms