RNA–Protein interactions for RNA: ENST00000543283.2

CCSER2-210, Transcript of coiled-coil serine rich protein 2, humanhuman

TSL 2 BASIC

Gene CCSER2, Length 5,888 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER2-210ENST00000543283 DCAF8L2P0C7V8 631 aa8.32□□□□□ -1.08
CCSER2-210ENST00000543283 NISCHQ9Y2I1 1504 aa7.83□□□□□ -1.16
CCSER2-210ENST00000543283 SUPT5HO00267 1087 aaKnown RBP7.78□□□□□ -1.16
CCSER2-210ENST00000543283 SHROOM4Q9ULL8 1493 aa7.64□□□□□ -1.19
CCSER2-210ENST00000543283 FAM9AQ8IZU1 332 aaPredicted RBP7.61□□□□□ -1.19
CCSER2-210ENST00000543283 APLP2Q06481 763 aa7.58□□□□□ -1.2
CCSER2-210ENST00000543283 PELP1Q8IZL8 1130 aaKnown RBP7.55□□□□□ -1.2
CCSER2-210ENST00000543283 EHMT2Q96KQ7 1210 aa7.55□□□□□ -1.2
CCSER2-210ENST00000543283 TTBK1Q5TCY1 1321 aaPredicted RBP7.3□□□□□ -1.24
CCSER2-210ENST00000543283 ATP1B4Q9UN42 357 aaPredicted RBP7.29□□□□□ -1.24
CCSER2-210ENST00000543283 RANGAP1P46060 587 aaPredicted RBP7.28□□□□□ -1.24
CCSER2-210ENST00000543283 TRIM41Q8WV44 630 aa7.26□□□□□ -1.25
CCSER2-210ENST00000543283 CCER1Q8TC90 406 aaPredicted RBP7.22□□□□□ -1.25
CCSER2-210ENST00000543283 ZEB1P37275 1124 aaPredicted RBP7.22□□□□□ -1.25
CCSER2-210ENST00000543283 PCGF6Q9BYE7 350 aa7.22□□□□□ -1.25
CCSER2-210ENST00000543283 UBTFP17480 764 aaKnown RBP7.21□□□□□ -1.25
CCSER2-210ENST00000543283 ERICH6Q7L0X2 663 aa7.2□□□□□ -1.26
CCSER2-210ENST00000543283 CENPBP07199 599 aaPredicted RBP7.18□□□□□ -1.26
CCSER2-210ENST00000543283 CCDC180Q9P1Z9 1646 aa7.17□□□□□ -1.26
CCSER2-210ENST00000543283 MYT1LQ9UL68 1186 aa7.11□□□□□ -1.27
CCSER2-210ENST00000543283 NEFLP07196 543 aa7.1□□□□□ -1.27
CCSER2-210ENST00000543283 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.07□□□□□ -1.28
CCSER2-210ENST00000543283 HNRNPUL2Q1KMD3 747 aaKnown RBP7.07□□□□□ -1.28
CCSER2-210ENST00000543283 YTHDC1Q96MU7 727 aaKnown RBP6.97□□□□□ -1.29
CCSER2-210ENST00000543283 POLR3GLQ9BT43 218 aa6.96□□□□□ -1.3
CCSER2-210ENST00000543283 ITGAEP38570 1179 aa6.96□□□□□ -1.3
CCSER2-210ENST00000543283 PPARGC1BQ86YN6 1023 aaKnown RBP6.94□□□□□ -1.3
CCSER2-210ENST00000543283 DAXXQ9UER7 740 aaPredicted RBP6.94□□□□□ -1.3
CCSER2-210ENST00000543283 TRIM26Q12899 539 aaPredicted RBP6.94□□□□□ -1.3
CCSER2-210ENST00000543283 CHIC1Q5VXU3 224 aa6.91□□□□□ -1.3
CCSER2-210ENST00000543283 SLC4A1APQ9BWU0 796 aaKnown RBP6.9□□□□□ -1.3
CCSER2-210ENST00000543283 MYO15BQ96JP2 1530 aa6.87□□□□□ -1.31
CCSER2-210ENST00000543283 ABCC9O60706 1549 aa6.85□□□□□ -1.31
CCSER2-210ENST00000543283 MYT1Q01538 1121 aa6.84□□□□□ -1.32
CCSER2-210ENST00000543283 FAM50AQ14320 339 aaKnown RBP6.82□□□□□ -1.32
CCSER2-210ENST00000543283 PABPN1Q86U42 306 aaKnown RBP eCLIP6.82□□□□□ -1.32
CCSER2-210ENST00000543283 CNGB1Q14028 1251 aaPredicted RBP6.81□□□□□ -1.32
CCSER2-210ENST00000543283 TRIM52Q96A61 297 aa6.81□□□□□ -1.32
CCSER2-210ENST00000543283 DCAF1Q9Y4B6 1507 aa6.79□□□□□ -1.32
CCSER2-210ENST00000543283 HRCP23327 699 aa6.78□□□□□ -1.32
CCSER2-210ENST00000543283 LOC105371045A0A1W2PR82 267 aa6.78□□□□□ -1.32
CCSER2-210ENST00000543283 CLSPNQ9HAW4 1339 aa6.78□□□□□ -1.32
CCSER2-210ENST00000543283 FBLN2P98095 1184 aa6.78□□□□□ -1.32
CCSER2-210ENST00000543283 ZNF316A6NFI3 1004 aaPredicted RBP6.77□□□□□ -1.33
CCSER2-210ENST00000543283 ZBTB47Q9UFB7 747 aaPredicted RBP6.73□□□□□ -1.33
CCSER2-210ENST00000543283 BCANQ96GW7 911 aa6.72□□□□□ -1.33
CCSER2-210ENST00000543283 NEUROD1Q13562 356 aa6.71□□□□□ -1.33
CCSER2-210ENST00000543283 NEFMP07197 916 aa6.7□□□□□ -1.34
CCSER2-210ENST00000543283 ZNF326Q5BKZ1 582 aaKnown RBP6.7□□□□□ -1.34
CCSER2-210ENST00000543283 RTL5Q5HYW3 569 aaPredicted RBP6.7□□□□□ -1.34
CCSER2-210ENST00000543283 ESF1Q9H501 851 aaKnown RBP6.68□□□□□ -1.34
CCSER2-210ENST00000543283 ANP32CO43423 234 aa6.68□□□□□ -1.34
CCSER2-210ENST00000543283 DIEXFQ68CQ4 756 aaKnown RBP6.68□□□□□ -1.34
CCSER2-210ENST00000543283 SLC24A1O60721 1099 aa6.67□□□□□ -1.34
CCSER2-210ENST00000543283 CDK11AQ9UQ88 783 aaPredicted RBP6.67□□□□□ -1.34
CCSER2-210ENST00000543283 CANXP27824 592 aaKnown RBP6.66□□□□□ -1.34
CCSER2-210ENST00000543283 NPM1P06748 294 aaKnown RBP eCLIP6.63□□□□□ -1.35
CCSER2-210ENST00000543283 ZNF777Q9ULD5 760 aaPredicted RBP6.63□□□□□ -1.35
CCSER2-210ENST00000543283 P3H3Q8IVL6 736 aa6.62□□□□□ -1.35
CCSER2-210ENST00000543283 ARID3CA6NKF2 412 aa6.62□□□□□ -1.35
CCSER2-210ENST00000543283 STAG3Q9UJ98 1225 aa6.61□□□□□ -1.35
CCSER2-210ENST00000543283 CSRNP3Q8WYN3 585 aa6.59□□□□□ -1.35
CCSER2-210ENST00000543283 SCRIBQ14160 1630 aa6.58□□□□□ -1.36
CCSER2-210ENST00000543283 NACADO15069 1562 aa6.58□□□□□ -1.36
CCSER2-210ENST00000543283 CHGAP10645 457 aaKnown RBP6.56□□□□□ -1.36
CCSER2-210ENST00000543283 BCL11AQ9H165 835 aa6.55□□□□□ -1.36
CCSER2-210ENST00000543283 PLPPR3Q6T4P5 718 aa6.54□□□□□ -1.36
CCSER2-210ENST00000543283 TONSLQ96HA7 1378 aa6.52□□□□□ -1.37
CCSER2-210ENST00000543283 ZCCHC6Q5VYS8 1495 aaKnown RBP6.5□□□□□ -1.37
CCSER2-210ENST00000543283 ANP32AP39687 249 aaKnown RBP6.49□□□□□ -1.37
CCSER2-210ENST00000543283 CHMP7Q8WUX9 453 aaPredicted RBP6.49□□□□□ -1.37
CCSER2-210ENST00000543283 TSPY4P0CV99 314 aa6.48□□□□□ -1.37
CCSER2-210ENST00000543283 TSPY10P0CW01 314 aa6.48□□□□□ -1.37
CCSER2-210ENST00000543283 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.48□□□□□ -1.379e-8■■■■□ 19.8
CCSER2-210ENST00000543283 UPF2Q9HAU5 1272 aaKnown RBP6.47□□□□□ -1.37
CCSER2-210ENST00000543283 RB1CC1Q8TDY2 1594 aa6.46□□□□□ -1.38
CCSER2-210ENST00000543283 GTF3C3Q9Y5Q9 886 aa6.46□□□□□ -1.38
CCSER2-210ENST00000543283 SCAF1Q9H7N4 1312 aaKnown RBP6.45□□□□□ -1.38
CCSER2-210ENST00000543283 HSP90AA1P07900 732 aaKnown RBP6.45□□□□□ -1.38
CCSER2-210ENST00000543283 ANP32BQ92688 251 aaKnown RBP6.45□□□□□ -1.38
CCSER2-210ENST00000543283 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.45□□□□□ -1.38
CCSER2-210ENST00000543283 MTUS2Q5JR59 1369 aa6.45□□□□□ -1.38
CCSER2-210ENST00000543283 WDR43Q15061 677 aaKnown RBP eCLIP6.44□□□□□ -1.38
CCSER2-210ENST00000543283 CHIC2Q9UKJ5 165 aa6.44□□□□□ -1.38
CCSER2-210ENST00000543283 ACIN1Q9UKV3 1341 aaKnown RBP6.43□□□□□ -1.38
CCSER2-210ENST00000543283 PPP1R15AO75807 674 aaPredicted RBP6.43□□□□□ -1.38
CCSER2-210ENST00000543283 NPM2Q86SE8 214 aaKnown RBP6.43□□□□□ -1.38
CCSER2-210ENST00000543283 RSF1Q96T23 1441 aaPredicted RBP6.41□□□□□ -1.38
CCSER2-210ENST00000543283 TMC1Q8TDI8 760 aa6.41□□□□□ -1.38
CCSER2-210ENST00000543283 MYH16Q9H6N6 1097 aa6.41□□□□□ -1.38
CCSER2-210ENST00000543283 A0A0G2JS52 829 aa6.4□□□□□ -1.38
CCSER2-210ENST00000543283 FAM9BQ8IZU0 186 aa6.4□□□□□ -1.38
CCSER2-210ENST00000543283 HNRNPUQ00839 825 aaKnown RBP eCLIP6.4□□□□□ -1.38
CCSER2-210ENST00000543283 C14orf37Q86TY3 774 aa6.4□□□□□ -1.38
CCSER2-210ENST00000543283 KDM2AQ9Y2K7 1162 aa6.4□□□□□ -1.39
CCSER2-210ENST00000543283 PLEKHD1A6NEE1 506 aa6.4□□□□□ -1.39
CCSER2-210ENST00000543283 ZBTB7CA1YPR0 619 aa6.39□□□□□ -1.39
CCSER2-210ENST00000543283 ARID4BQ4LE39 1312 aaPredicted RBP6.38□□□□□ -1.39
CCSER2-210ENST00000543283 KCNH8Q96L42 1107 aa6.38□□□□□ -1.39
CCSER2-210ENST00000543283 HAP1P54257 671 aaPredicted RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms