Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 AC020978.1-201ENST00000465542 337 ntBASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 RPL23AP64-201ENST00000469465 435 ntBASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 CREM-236ENST00000487763 429 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 AC139453.3-201ENST00000493276 369 ntBASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 AC009567.2-201ENST00000502989 349 ntBASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 MTND6P8-201ENST00000503471 522 ntBASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 AC097535.2-201ENST00000507715 142 ntBASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 AC034206.1-202ENST00000514446 634 ntTSL 3 BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 AC027801.3-201ENST00000515049 698 ntBASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 RN7SKP49-201ENST00000516675 260 ntBASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 Y_RNA.710-201ENST00000516975 110 ntBASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 LINC01605-202ENST00000519738 733 ntTSL 5 BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 AC091987.1-202ENST00000522464 789 ntTSL 3 BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 GZMB-205ENST00000526004 819 ntTSL 3 BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 RNF185-AS1-201ENST00000526089 353 ntBASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 CSRP1-209ENST00000526723 574 ntTSL 3 BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 ARL2-206ENST00000533729 795 ntTSL 5 BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 UBB-204ENST00000535788 704 ntTSL 2 BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 GRAMD4P5-201ENST00000557243 761 ntBASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 AC046168.2-202ENST00000561123 926 ntTSL 3 BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 AF096876.1-201ENST00000565564 444 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 MIR3911-201ENST00000577791 109 ntBASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 RN7SL663P-201ENST00000578592 299 ntBASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 MIR4517-201ENST00000578855 79 ntBASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 RN7SL15P-201ENST00000582825 301 ntBASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 MIR3610-201ENST00000582903 73 ntBASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 AC008649.2-201ENST00000585999 242 ntTSL 5 BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 DNAH17-AS1-201ENST00000588565 513 ntTSL 2 BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 APOC1-203ENST00000588802 553 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 AC008569.1-201ENST00000590626 252 ntTSL 3 BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 DMAC2-209ENST00000590641 1026 ntTSL 2 BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 AC003002.4-203ENST00000596400 630 ntTSL 4 BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 AC011467.3-201ENST00000599738 429 ntTSL 5 BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 DEFB117-201ENST00000602356 141 ntBASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 AL355376.2-202ENST00000604686 241 ntBASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 RPL12P48-201ENST00000605620 304 ntBASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 MIR8076-201ENST00000611401 83 ntBASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 NOP16-208ENST00000616685 472 ntTSL 3 BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 AC007450.3-201ENST00000620115 247 ntBASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 AC092628.2-201ENST00000622492 339 ntBASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 MIR6876-201ENST00000622618 73 ntBASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 AC012629.3-201ENST00000623397 328 ntBASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 AP001525.1-201ENST00000624611 236 ntBASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 NANOGP8-202ENST00000629403 870 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 AC073488.10-201ENST00000633241 778 ntBASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 APLNR-202ENST00000606794 3609 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 TCAF1-201ENST00000355951 3343 ntAPPRIS ALT1 TSL 1 (best) BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 SNCA-206ENST00000420646 3127 ntTSL 2 BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 LINC00265-201ENST00000340510 3049 ntTSL 5 BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 INHBA-AS1-201ENST00000415848 3005 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 CNTNAP4-201ENST00000307431 4867 ntAPPRIS ALT1 TSL 5 BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 COL24A1-201ENST00000370571 6825 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 CNTNAP4-207ENST00000611870 4867 ntAPPRIS P2 TSL 1 (best) BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 FAM193A-203ENST00000502458 4083 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 PRNT-201ENST00000326539 2333 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 MAGEB3-201ENST00000361644 2305 ntAPPRIS P1 TSL 2 BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 TMEM130-205ENST00000450876 3891 ntTSL 2 BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 BTK-202ENST00000372880 2248 ntTSL 2 BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 P4HA2-203ENST00000379086 2223 ntAPPRIS ALT1 TSL 5 BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 TTC39B-206ENST00000507285 2243 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 CAB39L-202ENST00000355854 3676 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 ASCC1-202ENST00000317168 2002 ntAPPRIS P1 TSL 2 BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 COPB2-201ENST00000333188 3360 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 C1orf87-201ENST00000371201 2028 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 ALOXE3-202ENST00000380149 3362 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 GINS3-202ENST00000328514 1932 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 SLC11A2-205ENST00000545993 1937 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 PRICKLE1-213ENST00000639589 5761 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 BSN-201ENST00000296452 15955 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 EIF2AK2-203ENST00000395127 4343 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 STAT1-204ENST00000409465 3097 ntAPPRIS P3 TSL 1 (best) BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 OR2H2-202ENST00000641840 3061 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 CIZ1-225ENST00000538431 2996 ntAPPRIS ALT2 TSL 2 BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 SCRN1-201ENST00000242059 5257 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 INPP5F-202ENST00000369080 2882 ntTSL 2 BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 PCSK1-201ENST00000311106 5086 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 BBS9-204ENST00000396127 3914 ntTSL 5 BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 AC233702.10-201ENST00000426261 2780 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 NT5C1B-201ENST00000304081 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 ELOA-203ENST00000609199 2671 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 GAD1-217ENST00000625689 3700 ntTSL 5 BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 KCNQ3-204ENST00000521134 2577 ntAPPRIS ALT2 TSL 2 BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 STX16-206ENST00000371132 4552 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 DPF2-201ENST00000252268 2462 ntTSL 5 BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 AKAP12-202ENST00000354675 6287 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 UTY-215ENST00000618474 6277 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 ECM1-201ENST00000346569 1444 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 RAE1-201ENST00000371242 2362 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 ZNF780A-202ENST00000414720 2396 ntTSL 2 BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 SEMA4D-207ENST00000420987 4275 ntTSL 5 BASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 301.3 ms