RNA–Protein interactions for RNA: ENST00000639589.1

PRICKLE1-213, Transcript of prickle planar cell polarity protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRICKLE1, Length 5,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1-213ENST00000639589 DCAF8L2P0C7V8 631 aa17.07■□□□□ 0.32
PRICKLE1-213ENST00000639589 NISCHQ9Y2I1 1504 aa16.78■□□□□ 0.28
PRICKLE1-213ENST00000639589 SUPT5HO00267 1087 aaKnown RBP15.49■□□□□ 0.07
PRICKLE1-213ENST00000639589 SHROOM4Q9ULL8 1493 aa15.43■□□□□ 0.06
PRICKLE1-213ENST00000639589 FAM9AQ8IZU1 332 aaPredicted RBP15.33■□□□□ 0.04
PRICKLE1-213ENST00000639589 ABCC9O60706 1549 aa15.04■□□□□ -0
PRICKLE1-213ENST00000639589 EHMT2Q96KQ7 1210 aa14.99□□□□□ -0.01
PRICKLE1-213ENST00000639589 APLP2Q06481 763 aa14.9□□□□□ -0.02
PRICKLE1-213ENST00000639589 PABPN1Q86U42 306 aaKnown RBP eCLIP14.69□□□□□ -0.06
PRICKLE1-213ENST00000639589 ATP1B4Q9UN42 357 aaPredicted RBP14.53□□□□□ -0.08
PRICKLE1-213ENST00000639589 RANGAP1P46060 587 aaPredicted RBP14.48□□□□□ -0.09
PRICKLE1-213ENST00000639589 PELP1Q8IZL8 1130 aaKnown RBP14.48□□□□□ -0.09
PRICKLE1-213ENST00000639589 TTBK1Q5TCY1 1321 aaPredicted RBP14.46□□□□□ -0.1
PRICKLE1-213ENST00000639589 TRIM41Q8WV44 630 aa14.45□□□□□ -0.1
PRICKLE1-213ENST00000639589 MYT1LQ9UL68 1186 aa14.35□□□□□ -0.11
PRICKLE1-213ENST00000639589 UBTFP17480 764 aaKnown RBP14.32□□□□□ -0.12
PRICKLE1-213ENST00000639589 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.29□□□□□ -0.12
PRICKLE1-213ENST00000639589 HNRNPUL2Q1KMD3 747 aaKnown RBP14.29□□□□□ -0.12
PRICKLE1-213ENST00000639589 CCDC180Q9P1Z9 1646 aa14.24□□□□□ -0.13
PRICKLE1-213ENST00000639589 PCGF6Q9BYE7 350 aa14.18□□□□□ -0.14
PRICKLE1-213ENST00000639589 RB1CC1Q8TDY2 1594 aa14.18□□□□□ -0.14
PRICKLE1-213ENST00000639589 FBLN2P98095 1184 aa14.15□□□□□ -0.14
PRICKLE1-213ENST00000639589 CCER1Q8TC90 406 aaPredicted RBP14.1□□□□□ -0.15
PRICKLE1-213ENST00000639589 ZEB1P37275 1124 aaPredicted RBP14.09□□□□□ -0.15
PRICKLE1-213ENST00000639589 SCRIBQ14160 1630 aa14.08□□□□□ -0.16
PRICKLE1-213ENST00000639589 NACADO15069 1562 aa13.93□□□□□ -0.18
PRICKLE1-213ENST00000639589 CENPBP07199 599 aaPredicted RBP13.9□□□□□ -0.18
PRICKLE1-213ENST00000639589 NPM1P06748 294 aaKnown RBP eCLIP13.88□□□□□ -0.19
PRICKLE1-213ENST00000639589 CHIC1Q5VXU3 224 aa13.84□□□□□ -0.19
PRICKLE1-213ENST00000639589 ERICH6Q7L0X2 663 aa13.83□□□□□ -0.19
PRICKLE1-213ENST00000639589 ZCCHC6Q5VYS8 1495 aaKnown RBP13.82□□□□□ -0.2
PRICKLE1-213ENST00000639589 PPARGC1BQ86YN6 1023 aaKnown RBP13.81□□□□□ -0.2
PRICKLE1-213ENST00000639589 ERCC6Q03468 1493 aa13.8□□□□□ -0.2
PRICKLE1-213ENST00000639589 ITGAEP38570 1179 aa13.79□□□□□ -0.2
PRICKLE1-213ENST00000639589 NEFLP07196 543 aa13.76□□□□□ -0.21
PRICKLE1-213ENST00000639589 ESF1Q9H501 851 aaKnown RBP13.71□□□□□ -0.21
PRICKLE1-213ENST00000639589 TRIM26Q12899 539 aaPredicted RBP13.69□□□□□ -0.22
PRICKLE1-213ENST00000639589 POLR3GLQ9BT43 218 aa13.69□□□□□ -0.22
PRICKLE1-213ENST00000639589 CHMP7Q8WUX9 453 aaPredicted RBP13.66□□□□□ -0.22
PRICKLE1-213ENST00000639589 YTHDC1Q96MU7 727 aaKnown RBP13.63□□□□□ -0.23
PRICKLE1-213ENST00000639589 CDK11AQ9UQ88 783 aaPredicted RBP13.61□□□□□ -0.23
PRICKLE1-213ENST00000639589 BAZ1BQ9UIG0 1483 aaKnown RBP13.58□□□□□ -0.24
PRICKLE1-213ENST00000639589 SLC4A1APQ9BWU0 796 aaKnown RBP13.58□□□□□ -0.24
PRICKLE1-213ENST00000639589 BCANQ96GW7 911 aa13.56□□□□□ -0.24
PRICKLE1-213ENST00000639589 LOC105371045A0A1W2PR82 267 aa13.55□□□□□ -0.24
PRICKLE1-213ENST00000639589 FAM50AQ14320 339 aaKnown RBP13.54□□□□□ -0.24
PRICKLE1-213ENST00000639589 ARID3CA6NKF2 412 aa13.5□□□□□ -0.25
PRICKLE1-213ENST00000639589 TRIM52Q96A61 297 aa13.49□□□□□ -0.25
PRICKLE1-213ENST00000639589 PLPPR3Q6T4P5 718 aa13.47□□□□□ -0.25
PRICKLE1-213ENST00000639589 P3H3Q8IVL6 736 aa13.47□□□□□ -0.25
PRICKLE1-213ENST00000639589 TRHP20396 242 aaPredicted RBP13.45□□□□□ -0.26
PRICKLE1-213ENST00000639589 CNGB1Q14028 1251 aaPredicted RBP13.43□□□□□ -0.26
PRICKLE1-213ENST00000639589 ZNF777Q9ULD5 760 aaPredicted RBP13.42□□□□□ -0.26
PRICKLE1-213ENST00000639589 STAG3Q9UJ98 1225 aa13.4□□□□□ -0.26
PRICKLE1-213ENST00000639589 DAXXQ9UER7 740 aaPredicted RBP13.39□□□□□ -0.27
PRICKLE1-213ENST00000639589 CECR2Q9BXF3 1484 aa13.38□□□□□ -0.27
PRICKLE1-213ENST00000639589 DCAF1Q9Y4B6 1507 aa13.36□□□□□ -0.27
PRICKLE1-213ENST00000639589 PDS5BQ9NTI5 1447 aa13.36□□□□□ -0.27
PRICKLE1-213ENST00000639589 CSRNP3Q8WYN3 585 aa13.36□□□□□ -0.27
PRICKLE1-213ENST00000639589 BAZ1AQ9NRL2 1556 aaPredicted RBP13.33□□□□□ -0.28
PRICKLE1-213ENST00000639589 HRCP23327 699 aa13.3□□□□□ -0.28
PRICKLE1-213ENST00000639589 SMARCA2P51531 1590 aa13.29□□□□□ -0.28
PRICKLE1-213ENST00000639589 NEUROD1Q13562 356 aa13.29□□□□□ -0.28
PRICKLE1-213ENST00000639589 ARID4BQ4LE39 1312 aaPredicted RBP13.28□□□□□ -0.28
PRICKLE1-213ENST00000639589 ZNF326Q5BKZ1 582 aaKnown RBP13.26□□□□□ -0.29
PRICKLE1-213ENST00000639589 KCNH8Q96L42 1107 aa13.22□□□□□ -0.29
PRICKLE1-213ENST00000639589 CHGAP10645 457 aaKnown RBP13.21□□□□□ -0.3
PRICKLE1-213ENST00000639589 MYO15BQ96JP2 1530 aa13.19□□□□□ -0.3
PRICKLE1-213ENST00000639589 PLEKHD1A6NEE1 506 aa13.18□□□□□ -0.3
PRICKLE1-213ENST00000639589 CLSPNQ9HAW4 1339 aa13.16□□□□□ -0.3
PRICKLE1-213ENST00000639589 TSPY4P0CV99 314 aa13.15□□□□□ -0.31
PRICKLE1-213ENST00000639589 TSPY10P0CW01 314 aa13.15□□□□□ -0.31
PRICKLE1-213ENST00000639589 RSF1Q96T23 1441 aaPredicted RBP13.14□□□□□ -0.31
PRICKLE1-213ENST00000639589 KIF27Q86VH2 1401 aa13.13□□□□□ -0.31
PRICKLE1-213ENST00000639589 NEFMP07197 916 aa13.11□□□□□ -0.31
PRICKLE1-213ENST00000639589 WRNQ14191 1432 aaPredicted RBP eCLIP13.11□□□□□ -0.31
PRICKLE1-213ENST00000639589 SLC24A1O60721 1099 aa13.1□□□□□ -0.31
PRICKLE1-213ENST00000639589 ANP32CO43423 234 aa13.1□□□□□ -0.31
PRICKLE1-213ENST00000639589 DIEXFQ68CQ4 756 aaKnown RBP13.1□□□□□ -0.31
PRICKLE1-213ENST00000639589 AEBP2Q6ZN18 517 aaPredicted RBP13.09□□□□□ -0.31
PRICKLE1-213ENST00000639589 ZBTB47Q9UFB7 747 aaPredicted RBP13.09□□□□□ -0.31
PRICKLE1-213ENST00000639589 ZNF316A6NFI3 1004 aaPredicted RBP13.09□□□□□ -0.31
PRICKLE1-213ENST00000639589 PPP1R15AO75807 674 aaPredicted RBP13.06□□□□□ -0.32
PRICKLE1-213ENST00000639589 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.06□□□□□ -0.32
PRICKLE1-213ENST00000639589 MTUS2Q5JR59 1369 aa13.06□□□□□ -0.32
PRICKLE1-213ENST00000639589 C14orf37Q86TY3 774 aa13.05□□□□□ -0.32
PRICKLE1-213ENST00000639589 CEP164Q9UPV0 1460 aa13.05□□□□□ -0.32
PRICKLE1-213ENST00000639589 OSCARQ8IYS5 282 aa13.03□□□□□ -0.32
PRICKLE1-213ENST00000639589 CADPSQ9ULU8 1353 aa13.02□□□□□ -0.32
PRICKLE1-213ENST00000639589 EIF4G1Q04637 1599 aaKnown RBP13.02□□□□□ -0.32
PRICKLE1-213ENST00000639589 CARMIL2Q6F5E8 1435 aa13.02□□□□□ -0.32
PRICKLE1-213ENST00000639589 CANXP27824 592 aaKnown RBP13.01□□□□□ -0.33
PRICKLE1-213ENST00000639589 SCAF1Q9H7N4 1312 aaKnown RBP13□□□□□ -0.33
PRICKLE1-213ENST00000639589 SOGA1O94964 1423 aa12.99□□□□□ -0.33
PRICKLE1-213ENST00000639589 EEA1Q15075 1411 aa12.98□□□□□ -0.33
PRICKLE1-213ENST00000639589 CUX2O14529 1486 aa12.97□□□□□ -0.33
PRICKLE1-213ENST00000639589 MYT1Q01538 1121 aa12.93□□□□□ -0.34
PRICKLE1-213ENST00000639589 ATAD2BQ9ULI0 1458 aa12.93□□□□□ -0.34
PRICKLE1-213ENST00000639589 HAP1P54257 671 aaPredicted RBP12.93□□□□□ -0.34
PRICKLE1-213ENST00000639589 ABCC8Q09428 1581 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms