RNA–Protein interactions for RNA: ENST00000340510.8

LINC00265-201, long intergenic non-protein coding RNA 265, humanhuman

TSL 5 BASIC

Gene LINC00265, Length 3,049 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00265-201ENST00000340510 NISCHQ9Y2I1 1504 aa18.99■□□□□ 0.63
LINC00265-201ENST00000340510 PELP1Q8IZL8 1130 aaKnown RBP16.94■□□□□ 0.3
LINC00265-201ENST00000340510 SHROOM4Q9ULL8 1493 aa16.69■□□□□ 0.26
LINC00265-201ENST00000340510 HRCP23327 699 aa16.5■□□□□ 0.23
LINC00265-201ENST00000340510 DCAF8L2P0C7V8 631 aa16.48■□□□□ 0.23
LINC00265-201ENST00000340510 MYT1Q01538 1121 aa16.48■□□□□ 0.23
LINC00265-201ENST00000340510 SUPT5HO00267 1087 aaKnown RBP16.27■□□□□ 0.2
LINC00265-201ENST00000340510 PPARGC1BQ86YN6 1023 aaKnown RBP16.21■□□□□ 0.19
LINC00265-201ENST00000340510 SCAF1Q9H7N4 1312 aaKnown RBP16.05■□□□□ 0.16
LINC00265-201ENST00000340510 ZCCHC6Q5VYS8 1495 aaKnown RBP15.98■□□□□ 0.15
LINC00265-201ENST00000340510 CCDC180Q9P1Z9 1646 aa15.93■□□□□ 0.14
LINC00265-201ENST00000340510 PCGF6Q9BYE7 350 aa15.86■□□□□ 0.13
LINC00265-201ENST00000340510 TTBK1Q5TCY1 1321 aaPredicted RBP15.65■□□□□ 0.1
LINC00265-201ENST00000340510 CHIC1Q5VXU3 224 aa15.49■□□□□ 0.07
LINC00265-201ENST00000340510 ABCC9O60706 1549 aa15.48■□□□□ 0.07
LINC00265-201ENST00000340510 BCL11AQ9H165 835 aa15.44■□□□□ 0.06
LINC00265-201ENST00000340510 MYO15BQ96JP2 1530 aa15.43■□□□□ 0.06
LINC00265-201ENST00000340510 AEBP2Q6ZN18 517 aaPredicted RBP15.41■□□□□ 0.06
LINC00265-201ENST00000340510 PRKCSHP14314 528 aaPredicted RBP15.41■□□□□ 0.06
LINC00265-201ENST00000340510 ACIN1Q9UKV3 1341 aaKnown RBP15.4■□□□□ 0.06
LINC00265-201ENST00000340510 SCRIBQ14160 1630 aa15.37■□□□□ 0.05
LINC00265-201ENST00000340510 NEUROD1Q13562 356 aa15.35■□□□□ 0.05
LINC00265-201ENST00000340510 GTF3C3Q9Y5Q9 886 aa15.35■□□□□ 0.05
LINC00265-201ENST00000340510 FAM9AQ8IZU1 332 aaPredicted RBP15.31■□□□□ 0.04
LINC00265-201ENST00000340510 DCAF1Q9Y4B6 1507 aa15.28■□□□□ 0.04
LINC00265-201ENST00000340510 LOC105371045A0A1W2PR82 267 aa15.28■□□□□ 0.04
LINC00265-201ENST00000340510 EHMT2Q96KQ7 1210 aa15.27■□□□□ 0.04
LINC00265-201ENST00000340510 CENPBP07199 599 aaPredicted RBP15.22■□□□□ 0.03
LINC00265-201ENST00000340510 ZEB1P37275 1124 aaPredicted RBP15.18■□□□□ 0.02
LINC00265-201ENST00000340510 RSF1Q96T23 1441 aaPredicted RBP15.09■□□□□ 0.01
LINC00265-201ENST00000340510 TRIM26Q12899 539 aaPredicted RBP15.08■□□□□ 0
LINC00265-201ENST00000340510 CECR2Q9BXF3 1484 aa15.07■□□□□ 0
LINC00265-201ENST00000340510 TRIM41Q8WV44 630 aa14.97□□□□□ -0.01
LINC00265-201ENST00000340510 PABPN1Q86U42 306 aaKnown RBP eCLIP14.96□□□□□ -0.01
LINC00265-201ENST00000340510 RB1CC1Q8TDY2 1594 aa14.96□□□□□ -0.01
LINC00265-201ENST00000340510 ERICH6Q7L0X2 663 aa14.95□□□□□ -0.02
LINC00265-201ENST00000340510 ANP32EQ9BTT0 268 aa14.92□□□□□ -0.02
LINC00265-201ENST00000340510 MROH2BQ7Z745 1585 aa14.9□□□□□ -0.02
LINC00265-201ENST00000340510 NACADO15069 1562 aa14.87□□□□□ -0.03
LINC00265-201ENST00000340510 CSRNP3Q8WYN3 585 aa14.84□□□□□ -0.03
LINC00265-201ENST00000340510 APLP2Q06481 763 aa14.83□□□□□ -0.04
LINC00265-201ENST00000340510 WIZO95785 1651 aa14.81□□□□□ -0.04
LINC00265-201ENST00000340510 DIEXFQ68CQ4 756 aaKnown RBP14.76□□□□□ -0.05
LINC00265-201ENST00000340510 YTHDC1Q96MU7 727 aaKnown RBP14.69□□□□□ -0.06
LINC00265-201ENST00000340510 UNC13AQ9UPW8 1703 aa14.55□□□□□ -0.08
LINC00265-201ENST00000340510 ABCC8Q09428 1581 aa14.55□□□□□ -0.08
LINC00265-201ENST00000340510 TSHZ2Q9NRE2 1034 aa14.55□□□□□ -0.08
LINC00265-201ENST00000340510 BAZ1AQ9NRL2 1556 aaPredicted RBP14.54□□□□□ -0.08
LINC00265-201ENST00000340510 CCDC88BA6NC98 1476 aa14.5□□□□□ -0.09
LINC00265-201ENST00000340510 SMARCA4P51532 1647 aa14.48□□□□□ -0.09
LINC00265-201ENST00000340510 RANGAP1P46060 587 aaPredicted RBP14.46□□□□□ -0.1
LINC00265-201ENST00000340510 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.45□□□□□ -0.1
LINC00265-201ENST00000340510 ANO8Q9HCE9 1232 aaPredicted RBP14.44□□□□□ -0.1
LINC00265-201ENST00000340510 CCER1Q8TC90 406 aaPredicted RBP14.43□□□□□ -0.1
LINC00265-201ENST00000340510 BICRAQ9NZM4 1560 aa14.43□□□□□ -0.1
LINC00265-201ENST00000340510 SUPT16HQ9Y5B9 1047 aaKnown RBP14.41□□□□□ -0.1
LINC00265-201ENST00000340510 SOGA1O94964 1423 aa14.4□□□□□ -0.1
LINC00265-201ENST00000340510 TOP2AP11388 1531 aaKnown RBP14.39□□□□□ -0.11
LINC00265-201ENST00000340510 SMARCA2P51531 1590 aa14.38□□□□□ -0.11
LINC00265-201ENST00000340510 RUSC2Q8N2Y8 1516 aa14.38□□□□□ -0.11
LINC00265-201ENST00000340510 UBTFP17480 764 aaKnown RBP14.36□□□□□ -0.11
LINC00265-201ENST00000340510 MIER1Q8N108 512 aa14.32□□□□□ -0.12
LINC00265-201ENST00000340510 EIF4G1Q04637 1599 aaKnown RBP14.31□□□□□ -0.12
LINC00265-201ENST00000340510 ZNF316A6NFI3 1004 aaPredicted RBP14.27□□□□□ -0.13
LINC00265-201ENST00000340510 CLSPNQ9HAW4 1339 aa14.24□□□□□ -0.13
LINC00265-201ENST00000340510 ATAD2BQ9ULI0 1458 aa14.22□□□□□ -0.13
LINC00265-201ENST00000340510 BAZ1BQ9UIG0 1483 aaKnown RBP14.2□□□□□ -0.14
LINC00265-201ENST00000340510 WRNQ14191 1432 aaPredicted RBP eCLIP14.19□□□□□ -0.14
LINC00265-201ENST00000340510 SALL2Q9Y467 1007 aaPredicted RBP14.18□□□□□ -0.14
LINC00265-201ENST00000340510 CCDC136Q96JN2 1154 aa14.17□□□□□ -0.14
LINC00265-201ENST00000340510 CEP162Q5TB80 1403 aa14.16□□□□□ -0.14
LINC00265-201ENST00000340510 UBE2Q2Q8WVN8 375 aa14.15□□□□□ -0.15
LINC00265-201ENST00000340510 RBM19Q9Y4C8 960 aaKnown RBP14.13□□□□□ -0.15
LINC00265-201ENST00000340510 SYNJ1O43426 1573 aa14.11□□□□□ -0.15
LINC00265-201ENST00000340510 MSH5O43196 834 aa14.1□□□□□ -0.15
LINC00265-201ENST00000340510 BCANQ96GW7 911 aa14.09□□□□□ -0.15
LINC00265-201ENST00000340510 DEKP35659 375 aaKnown RBP14.07□□□□□ -0.16
LINC00265-201ENST00000340510 HNRNPUL2Q1KMD3 747 aaKnown RBP14.05□□□□□ -0.16
LINC00265-201ENST00000340510 EIF5BO60841 1220 aaKnown RBP14.05□□□□□ -0.16
LINC00265-201ENST00000340510 SLC24A1O60721 1099 aa14.03□□□□□ -0.16
LINC00265-201ENST00000340510 TNIKQ9UKE5 1360 aa14.02□□□□□ -0.17
LINC00265-201ENST00000340510 PEG3Q9GZU2 1588 aa14.01□□□□□ -0.17
LINC00265-201ENST00000340510 RAPGEF2Q9Y4G8 1499 aa13.99□□□□□ -0.17
LINC00265-201ENST00000340510 GOLGA3Q08378 1498 aa13.97□□□□□ -0.17
LINC00265-201ENST00000340510 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.97□□□□□ -0.17
LINC00265-201ENST00000340510 MYT1LQ9UL68 1186 aa13.96□□□□□ -0.17
LINC00265-201ENST00000340510 ERICH6BQ5W0A0 696 aa13.94□□□□□ -0.18
LINC00265-201ENST00000340510 CLIP1P30622 1438 aa13.92□□□□□ -0.18
LINC00265-201ENST00000340510 DNAJC5BQ9UF47 199 aa13.91□□□□□ -0.18
LINC00265-201ENST00000340510 FKBP8Q14318 412 aa13.9□□□□□ -0.18
LINC00265-201ENST00000340510 EEA1Q15075 1411 aa13.9□□□□□ -0.18
LINC00265-201ENST00000340510 CEP164Q9UPV0 1460 aa13.88□□□□□ -0.19
LINC00265-201ENST00000340510 PKNOX2Q96KN3 472 aa13.86□□□□□ -0.19
LINC00265-201ENST00000340510 PLEKHG5O94827 1062 aa13.86□□□□□ -0.19
LINC00265-201ENST00000340510 NCAPD3P42695 1498 aa13.86□□□□□ -0.19
LINC00265-201ENST00000340510 ITGAEP38570 1179 aa13.85□□□□□ -0.19
LINC00265-201ENST00000340510 RTN4Q9NQC3 1192 aaKnown RBP13.85□□□□□ -0.19
LINC00265-201ENST00000340510 P3H3Q8IVL6 736 aa13.85□□□□□ -0.19
LINC00265-201ENST00000340510 CUX1P39880 1505 aa13.84□□□□□ -0.19
LINC00265-201ENST00000340510 FANCIQ9NVI1 1328 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms