RNA–Protein interactions for RNA: ENST00000625689.2

GAD1-217, Transcript of glutamate decarboxylase 1, humanhuman

TSL 5 BASIC

Gene GAD1, Length 3,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAD1-217ENST00000625689 NISCHQ9Y2I1 1504 aa17.92■□□□□ 0.46
GAD1-217ENST00000625689 SUPT5HO00267 1087 aaKnown RBP16.09■□□□□ 0.17
GAD1-217ENST00000625689 SHROOM4Q9ULL8 1493 aa16.02■□□□□ 0.16
GAD1-217ENST00000625689 PPARGC1BQ86YN6 1023 aaKnown RBP16■□□□□ 0.15
GAD1-217ENST00000625689 PCGF6Q9BYE7 350 aa15.98■□□□□ 0.15
GAD1-217ENST00000625689 HRCP23327 699 aa15.9■□□□□ 0.14
GAD1-217ENST00000625689 DCAF8L2P0C7V8 631 aa15.61■□□□□ 0.09
GAD1-217ENST00000625689 PELP1Q8IZL8 1130 aaKnown RBP15.36■□□□□ 0.05
GAD1-217ENST00000625689 EHMT2Q96KQ7 1210 aa15.36■□□□□ 0.05
GAD1-217ENST00000625689 LOC105371045A0A1W2PR82 267 aa15.34■□□□□ 0.05
GAD1-217ENST00000625689 CHIC1Q5VXU3 224 aa15.32■□□□□ 0.04
GAD1-217ENST00000625689 MYO15BQ96JP2 1530 aa15.23■□□□□ 0.03
GAD1-217ENST00000625689 SCAF1Q9H7N4 1312 aaKnown RBP15.21■□□□□ 0.03
GAD1-217ENST00000625689 ZCCHC6Q5VYS8 1495 aaKnown RBP15.1■□□□□ 0.01
GAD1-217ENST00000625689 FAM9AQ8IZU1 332 aaPredicted RBP15.06■□□□□ 0
GAD1-217ENST00000625689 TRIM26Q12899 539 aaPredicted RBP15.05■□□□□ 0
GAD1-217ENST00000625689 CCDC180Q9P1Z9 1646 aa15□□□□□ -0.01
GAD1-217ENST00000625689 TTBK1Q5TCY1 1321 aaPredicted RBP14.92□□□□□ -0.02
GAD1-217ENST00000625689 GTF3C3Q9Y5Q9 886 aa14.9□□□□□ -0.02
GAD1-217ENST00000625689 YTHDC1Q96MU7 727 aaKnown RBP14.88□□□□□ -0.03
GAD1-217ENST00000625689 ZEB1P37275 1124 aaPredicted RBP14.87□□□□□ -0.03
GAD1-217ENST00000625689 NEUROD1Q13562 356 aa14.86□□□□□ -0.03
GAD1-217ENST00000625689 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.78□□□□□ -0.04
GAD1-217ENST00000625689 ACIN1Q9UKV3 1341 aaKnown RBP14.78□□□□□ -0.04
GAD1-217ENST00000625689 CCER1Q8TC90 406 aaPredicted RBP14.77□□□□□ -0.04
GAD1-217ENST00000625689 CENPBP07199 599 aaPredicted RBP14.75□□□□□ -0.05
GAD1-217ENST00000625689 MYT1Q01538 1121 aa14.7□□□□□ -0.06
GAD1-217ENST00000625689 DCAF1Q9Y4B6 1507 aa14.64□□□□□ -0.07
GAD1-217ENST00000625689 DIEXFQ68CQ4 756 aaKnown RBP14.64□□□□□ -0.07
GAD1-217ENST00000625689 TRIM41Q8WV44 630 aa14.62□□□□□ -0.07
GAD1-217ENST00000625689 ABCC9O60706 1549 aa14.54□□□□□ -0.08
GAD1-217ENST00000625689 SCRIBQ14160 1630 aa14.52□□□□□ -0.09
GAD1-217ENST00000625689 RSF1Q96T23 1441 aaPredicted RBP14.27□□□□□ -0.13
GAD1-217ENST00000625689 MIER1Q8N108 512 aa14.25□□□□□ -0.13
GAD1-217ENST00000625689 HNRNPUL2Q1KMD3 747 aaKnown RBP14.21□□□□□ -0.13
GAD1-217ENST00000625689 CECR2Q9BXF3 1484 aa14.2□□□□□ -0.14
GAD1-217ENST00000625689 ZNF316A6NFI3 1004 aaPredicted RBP14.2□□□□□ -0.14
GAD1-217ENST00000625689 BCANQ96GW7 911 aa14.2□□□□□ -0.14
GAD1-217ENST00000625689 RANGAP1P46060 587 aaPredicted RBP14.18□□□□□ -0.14
GAD1-217ENST00000625689 RB1CC1Q8TDY2 1594 aa14.17□□□□□ -0.14
GAD1-217ENST00000625689 BCL11AQ9H165 835 aa14.11□□□□□ -0.15
GAD1-217ENST00000625689 PABPN1Q86U42 306 aaKnown RBP eCLIP14.07□□□□□ -0.16
GAD1-217ENST00000625689 MROH2BQ7Z745 1585 aa14.06□□□□□ -0.16
GAD1-217ENST00000625689 UBTFP17480 764 aaKnown RBP14.05□□□□□ -0.16
GAD1-217ENST00000625689 WIZO95785 1651 aa13.99□□□□□ -0.17
GAD1-217ENST00000625689 NACADO15069 1562 aa13.99□□□□□ -0.17
GAD1-217ENST00000625689 CSRNP3Q8WYN3 585 aa13.97□□□□□ -0.17
GAD1-217ENST00000625689 ANP32EQ9BTT0 268 aa13.97□□□□□ -0.17
GAD1-217ENST00000625689 SUPT16HQ9Y5B9 1047 aaKnown RBP13.95□□□□□ -0.18
GAD1-217ENST00000625689 TSHZ2Q9NRE2 1034 aa13.9□□□□□ -0.18
GAD1-217ENST00000625689 ITGAEP38570 1179 aa13.87□□□□□ -0.19
GAD1-217ENST00000625689 APLP2Q06481 763 aa13.87□□□□□ -0.19
GAD1-217ENST00000625689 ERICH6Q7L0X2 663 aa13.85□□□□□ -0.19
GAD1-217ENST00000625689 FKBP8Q14318 412 aa13.84□□□□□ -0.19
GAD1-217ENST00000625689 ABCC8Q09428 1581 aa13.79□□□□□ -0.2
GAD1-217ENST00000625689 NEFLP07196 543 aa13.77□□□□□ -0.2
GAD1-217ENST00000625689 KCNH8Q96L42 1107 aa13.76□□□□□ -0.21
GAD1-217ENST00000625689 BAZ1AQ9NRL2 1556 aaPredicted RBP13.73□□□□□ -0.21
GAD1-217ENST00000625689 CCDC88BA6NC98 1476 aa13.7□□□□□ -0.22
GAD1-217ENST00000625689 TRIM52Q96A61 297 aa13.69□□□□□ -0.22
GAD1-217ENST00000625689 IRX6P78412 446 aaPredicted RBP13.67□□□□□ -0.22
GAD1-217ENST00000625689 UNC13AQ9UPW8 1703 aa13.66□□□□□ -0.22
GAD1-217ENST00000625689 HIRIP3Q9BW71 556 aaPredicted RBP13.66□□□□□ -0.22
GAD1-217ENST00000625689 SMARCA4P51532 1647 aa13.65□□□□□ -0.22
GAD1-217ENST00000625689 SOGA1O94964 1423 aa13.65□□□□□ -0.22
GAD1-217ENST00000625689 RBM19Q9Y4C8 960 aaKnown RBP13.65□□□□□ -0.22
GAD1-217ENST00000625689 PRKCSHP14314 528 aaPredicted RBP13.64□□□□□ -0.23
GAD1-217ENST00000625689 CEP162Q5TB80 1403 aa13.62□□□□□ -0.23
GAD1-217ENST00000625689 DDX10Q13206 875 aaKnown RBP13.62□□□□□ -0.23
GAD1-217ENST00000625689 RUSC2Q8N2Y8 1516 aa13.61□□□□□ -0.23
GAD1-217ENST00000625689 TOP2AP11388 1531 aaKnown RBP13.6□□□□□ -0.23
GAD1-217ENST00000625689 SMARCA2P51531 1590 aa13.58□□□□□ -0.24
GAD1-217ENST00000625689 NBR1Q14596 966 aa13.55□□□□□ -0.24
GAD1-217ENST00000625689 CNGB1Q14028 1251 aaPredicted RBP13.53□□□□□ -0.24
GAD1-217ENST00000625689 EIF4G1Q04637 1599 aaKnown RBP13.52□□□□□ -0.25
GAD1-217ENST00000625689 BICRAQ9NZM4 1560 aa13.52□□□□□ -0.25
GAD1-217ENST00000625689 CLSPNQ9HAW4 1339 aa13.51□□□□□ -0.25
GAD1-217ENST00000625689 CDK11AQ9UQ88 783 aaPredicted RBP13.46□□□□□ -0.25
GAD1-217ENST00000625689 ATP1B4Q9UN42 357 aaPredicted RBP13.44□□□□□ -0.26
GAD1-217ENST00000625689 MSH5O43196 834 aa13.44□□□□□ -0.26
GAD1-217ENST00000625689 RTN4Q9NQC3 1192 aaKnown RBP13.44□□□□□ -0.26
GAD1-217ENST00000625689 WRNQ14191 1432 aaPredicted RBP eCLIP13.44□□□□□ -0.26
GAD1-217ENST00000625689 DEKP35659 375 aaKnown RBP13.4□□□□□ -0.26
GAD1-217ENST00000625689 BAZ1BQ9UIG0 1483 aaKnown RBP13.4□□□□□ -0.26
GAD1-217ENST00000625689 SENP3-EIF4A1A0A087X0R7 540 aa13.39□□□□□ -0.27
GAD1-217ENST00000625689 CCDC136Q96JN2 1154 aa13.38□□□□□ -0.27
GAD1-217ENST00000625689 ATAD2BQ9ULI0 1458 aa13.38□□□□□ -0.27
GAD1-217ENST00000625689 ANP32CO43423 234 aa13.38□□□□□ -0.27
GAD1-217ENST00000625689 HNRNPUQ00839 825 aaKnown RBP eCLIP13.38□□□□□ -0.27
GAD1-217ENST00000625689 ANO8Q9HCE9 1232 aaPredicted RBP13.37□□□□□ -0.27
GAD1-217ENST00000625689 TNIKQ9UKE5 1360 aa13.36□□□□□ -0.27
GAD1-217ENST00000625689 SIN3AQ96ST3 1273 aa13.35□□□□□ -0.27
GAD1-217ENST00000625689 SYNJ1O43426 1573 aa13.35□□□□□ -0.27
GAD1-217ENST00000625689 FAM50AQ14320 339 aaKnown RBP13.31□□□□□ -0.28
GAD1-217ENST00000625689 CLIP1P30622 1438 aa13.3□□□□□ -0.28
GAD1-217ENST00000625689 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.3□□□□□ -0.28
GAD1-217ENST00000625689 SLC24A1O60721 1099 aa13.29□□□□□ -0.28
GAD1-217ENST00000625689 GOLGA3Q08378 1498 aa13.29□□□□□ -0.28
GAD1-217ENST00000625689 RTL5Q5HYW3 569 aaPredicted RBP13.28□□□□□ -0.28
GAD1-217ENST00000625689 B4GALNT3Q6L9W6 998 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms