RNA–Protein interactions for RNA: ENST00000516675.1

RN7SKP49-201, Transcript of RNA, 7SK small nuclear pseudogene 49, humanhuman

BASIC

Gene RN7SKP49, Length 260 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP49-201ENST00000516675 AEBP2Q6ZN18 517 aaPredicted RBP14.31□□□□□ -0.12
RN7SKP49-201ENST00000516675 CHIC1Q5VXU3 224 aa13.76□□□□□ -0.21
RN7SKP49-201ENST00000516675 PHF23Q9BUL5 403 aaPredicted RBP12.14□□□□□ -0.47
RN7SKP49-201ENST00000516675 SENP3Q9H4L4 574 aaPredicted RBP12.09□□□□□ -0.47
RN7SKP49-201ENST00000516675 FOXD1Q16676 465 aa11.3□□□□□ -0.6
RN7SKP49-201ENST00000516675 PLPPR3Q6T4P5 718 aa11.08□□□□□ -0.64
RN7SKP49-201ENST00000516675 PPP6R1Q9UPN7 881 aa10.78□□□□□ -0.68
RN7SKP49-201ENST00000516675 ADRA2BP18089 450 aa10.75□□□□□ -0.69
RN7SKP49-201ENST00000516675 PIAS4Q8N2W9 510 aaPredicted RBP10.6□□□□□ -0.71
RN7SKP49-201ENST00000516675 MSH5O43196 834 aa10.41□□□□□ -0.74
RN7SKP49-201ENST00000516675 MAPK8IP2Q13387 824 aaPredicted RBP9.82□□□□□ -0.84
RN7SKP49-201ENST00000516675 POTEDQ86YR6 584 aa9.82□□□□□ -0.84
RN7SKP49-201ENST00000516675 PPP4R3CPQ6ZMV5 832 aa9.78□□□□□ -0.84
RN7SKP49-201ENST00000516675 SCAF1Q9H7N4 1312 aaKnown RBP9.74□□□□□ -0.85
RN7SKP49-201ENST00000516675 DMRT2Q9Y5R5 561 aa9.65□□□□□ -0.86
RN7SKP49-201ENST00000516675 CNKSR2Q8WXI2 1034 aa9.52□□□□□ -0.89
RN7SKP49-201ENST00000516675 NCBP3Q53F19 620 aaKnown RBP9.42□□□□□ -0.9
RN7SKP49-201ENST00000516675 KCNA4P22459 653 aa9.4□□□□□ -0.9
RN7SKP49-201ENST00000516675 HOXD11P31277 338 aaPredicted RBP9.38□□□□□ -0.91
RN7SKP49-201ENST00000516675 RNF216Q9NWF9 866 aaPredicted RBP9.36□□□□□ -0.91
RN7SKP49-201ENST00000516675 NPM3O75607 178 aaKnown RBP9.35□□□□□ -0.91
RN7SKP49-201ENST00000516675 DCAF8L1A6NGE4 600 aa9.26□□□□□ -0.93
RN7SKP49-201ENST00000516675 DNAJC5BQ9UF47 199 aa9.02□□□□□ -0.97
RN7SKP49-201ENST00000516675 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.94□□□□□ -0.98
RN7SKP49-201ENST00000516675 RNF39Q9H2S5 420 aa8.94□□□□□ -0.98
RN7SKP49-201ENST00000516675 SLC4A1APQ9BWU0 796 aaKnown RBP8.89□□□□□ -0.99
RN7SKP49-201ENST00000516675 SLC4A2P04920 1241 aa8.88□□□□□ -0.99
RN7SKP49-201ENST00000516675 CACNB1Q02641 598 aaPredicted RBP8.83□□□□□ -1
RN7SKP49-201ENST00000516675 U3KPZ7 1027 aaPredicted RBP8.81□□□□□ -1
RN7SKP49-201ENST00000516675 C1QBPQ07021 282 aaKnown RBP8.79□□□□□ -1
RN7SKP49-201ENST00000516675 ZBTB22O15209 634 aa8.67□□□□□ -1.02
RN7SKP49-201ENST00000516675 FOXD4L1Q9NU39 408 aa8.65□□□□□ -1.02
RN7SKP49-201ENST00000516675 SPINK5Q9NQ38 1064 aaPredicted RBP8.63□□□□□ -1.03
RN7SKP49-201ENST00000516675 MYCNP04198 464 aaPredicted RBP8.6□□□□□ -1.03
RN7SKP49-201ENST00000516675 CAPN15O75808 1086 aa8.57□□□□□ -1.04
RN7SKP49-201ENST00000516675 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.55□□□□□ -1.04
RN7SKP49-201ENST00000516675 HNRNPUL2Q1KMD3 747 aaKnown RBP8.55□□□□□ -1.04
RN7SKP49-201ENST00000516675 SAMD1Q6SPF0 538 aaPredicted RBP8.53□□□□□ -1.04
RN7SKP49-201ENST00000516675 TRHP20396 242 aaPredicted RBP8.5□□□□□ -1.05
RN7SKP49-201ENST00000516675 APLP2Q06481 763 aa8.49□□□□□ -1.05
RN7SKP49-201ENST00000516675 EHMT2Q96KQ7 1210 aa8.49□□□□□ -1.05
RN7SKP49-201ENST00000516675 ATF5Q9Y2D1 282 aaPredicted RBP8.47□□□□□ -1.05
RN7SKP49-201ENST00000516675 DSG3P32926 999 aa8.46□□□□□ -1.06
RN7SKP49-201ENST00000516675 CSRNP3Q8WYN3 585 aa8.46□□□□□ -1.06
RN7SKP49-201ENST00000516675 ABCB7O75027 752 aa8.43□□□□□ -1.06
RN7SKP49-201ENST00000516675 ZNF219Q9P2Y4 722 aaPredicted RBP8.43□□□□□ -1.06
RN7SKP49-201ENST00000516675 POLA2Q14181 598 aa8.34□□□□□ -1.07
RN7SKP49-201ENST00000516675 ATXN8OSP0DMR3 200 aa8.33□□□□□ -1.08
RN7SKP49-201ENST00000516675 ZBTB12Q9Y330 459 aaPredicted RBP8.09□□□□□ -1.11
RN7SKP49-201ENST00000516675 MKRN4PQ13434 485 aaPredicted RBP8.06□□□□□ -1.12
RN7SKP49-201ENST00000516675 OSCARQ8IYS5 282 aa8.05□□□□□ -1.12
RN7SKP49-201ENST00000516675 FBLN2P98095 1184 aa8.03□□□□□ -1.12
RN7SKP49-201ENST00000516675 RBM42Q9BTD8 480 aaKnown RBP8.01□□□□□ -1.13
RN7SKP49-201ENST00000516675 AKT1S1Q96B36 256 aa7.9□□□□□ -1.14
RN7SKP49-201ENST00000516675 SPDYE2BA6NHP3 402 aa7.89□□□□□ -1.15
RN7SKP49-201ENST00000516675 SPDYE6P0CI01 402 aa7.89□□□□□ -1.15
RN7SKP49-201ENST00000516675 SPDYE2Q495Y8 402 aa7.89□□□□□ -1.15
RN7SKP49-201ENST00000516675 ZNF692Q9BU19 519 aaPredicted RBP7.87□□□□□ -1.15
RN7SKP49-201ENST00000516675 REM2Q8IYK8 340 aaPredicted RBP7.86□□□□□ -1.15
RN7SKP49-201ENST00000516675 SSUH2Q9Y2M2 353 aa7.83□□□□□ -1.16
RN7SKP49-201ENST00000516675 CHRDL2Q6WN34 429 aa7.79□□□□□ -1.16
RN7SKP49-201ENST00000516675 SPDYE4A6NLX3 237 aa7.78□□□□□ -1.16
RN7SKP49-201ENST00000516675 PITPNM1O00562 1244 aa7.78□□□□□ -1.16
RN7SKP49-201ENST00000516675 PABPN1Q86U42 306 aaKnown RBP eCLIP7.78□□□□□ -1.16
RN7SKP49-201ENST00000516675 POTEHQ6S545 545 aa7.73□□□□□ -1.17
RN7SKP49-201ENST00000516675 CLEC11AQ9Y240 323 aa7.72□□□□□ -1.17
RN7SKP49-201ENST00000516675 SPDYE1Q8NFV5 336 aaPredicted RBP7.7□□□□□ -1.18
RN7SKP49-201ENST00000516675 PIP4P2Q8N4L2 257 aa7.68□□□□□ -1.18
RN7SKP49-201ENST00000516675 FKBP8Q14318 412 aa7.65□□□□□ -1.18
RN7SKP49-201ENST00000516675 FXR2P51116 673 aaKnown RBP eCLIP7.64□□□□□ -1.19
RN7SKP49-201ENST00000516675 PRR29P0C7W0 189 aa7.61□□□□□ -1.19
RN7SKP49-201ENST00000516675 PROM2Q8N271 834 aa7.61□□□□□ -1.19
RN7SKP49-201ENST00000516675 PRKAR2AP13861 404 aaKnown RBP7.58□□□□□ -1.2
RN7SKP49-201ENST00000516675 CHADLQ6NUI6 762 aa7.57□□□□□ -1.2
RN7SKP49-201ENST00000516675 STAG3Q9UJ98 1225 aa7.54□□□□□ -1.2
RN7SKP49-201ENST00000516675 CREBZFQ9NS37 354 aa7.49□□□□□ -1.21
RN7SKP49-201ENST00000516675 HAX1O00165 279 aa7.46□□□□□ -1.22
RN7SKP49-201ENST00000516675 EVX2Q03828 476 aa7.45□□□□□ -1.22
RN7SKP49-201ENST00000516675 FARP1Q9Y4F1 1045 aaPredicted RBP7.45□□□□□ -1.22
RN7SKP49-201ENST00000516675 C19orf67A6NJJ6 358 aa7.4□□□□□ -1.22
RN7SKP49-201ENST00000516675 MNX1P50219 401 aaPredicted RBP7.4□□□□□ -1.22
RN7SKP49-201ENST00000516675 MIER1Q8N108 512 aa7.39□□□□□ -1.23
RN7SKP49-201ENST00000516675 FBXO3Q9UK99 471 aa7.36□□□□□ -1.23
RN7SKP49-201ENST00000516675 PLCD3Q8N3E9 789 aa7.35□□□□□ -1.23
RN7SKP49-201ENST00000516675 SP7Q8TDD2 431 aaPredicted RBP7.35□□□□□ -1.23
RN7SKP49-201ENST00000516675 CD44P16070 742 aaKnown RBP7.34□□□□□ -1.23
RN7SKP49-201ENST00000516675 PLEKHG5O94827 1062 aa7.31□□□□□ -1.24
RN7SKP49-201ENST00000516675 NPM1P06748 294 aaKnown RBP eCLIP7.31□□□□□ -1.24
RN7SKP49-201ENST00000516675 VASPP50552 380 aaPredicted RBP7.3□□□□□ -1.24
RN7SKP49-201ENST00000516675 ZRANB1Q9UGI0 708 aa7.28□□□□□ -1.24
RN7SKP49-201ENST00000516675 RASEFQ8IZ41 740 aa7.26□□□□□ -1.25
RN7SKP49-201ENST00000516675 GABBR2O75899 941 aa7.25□□□□□ -1.25
RN7SKP49-201ENST00000516675 TSPYL2Q9H2G4 693 aaPredicted RBP7.25□□□□□ -1.25
RN7SKP49-201ENST00000516675 PHF12Q96QT6 1004 aa7.23□□□□□ -1.25
RN7SKP49-201ENST00000516675 ZBTB47Q9UFB7 747 aaPredicted RBP7.23□□□□□ -1.25
RN7SKP49-201ENST00000516675 PAK3O75914 559 aaPredicted RBP7.22□□□□□ -1.25
RN7SKP49-201ENST00000516675 NUBP1P53384 320 aa7.22□□□□□ -1.25
RN7SKP49-201ENST00000516675 IFNLR1Q8IU57 520 aaPredicted RBP7.22□□□□□ -1.25
RN7SKP49-201ENST00000516675 KLHL34Q8N239 644 aa7.21□□□□□ -1.26
RN7SKP49-201ENST00000516675 ZNF579Q8NAF0 562 aaKnown RBP7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms