RNA–Protein interactions for RNA: ENST00000311106.7

PCSK1-201, Transcript of proprotein convertase subtilisin/kexin type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCSK1, Length 5,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK1-201ENST00000311106 DCAF8L2P0C7V8 631 aa17.02■□□□□ 0.31
PCSK1-201ENST00000311106 FAM9AQ8IZU1 332 aaPredicted RBP16.03■□□□□ 0.16
PCSK1-201ENST00000311106 PELP1Q8IZL8 1130 aaKnown RBP15.91■□□□□ 0.14
PCSK1-201ENST00000311106 SUPT5HO00267 1087 aaKnown RBP15.79■□□□□ 0.12
PCSK1-201ENST00000311106 APLP2Q06481 763 aa15.76■□□□□ 0.11
PCSK1-201ENST00000311106 NISCHQ9Y2I1 1504 aa15.48■□□□□ 0.07
PCSK1-201ENST00000311106 SHROOM4Q9ULL8 1493 aa15.26■□□□□ 0.03
PCSK1-201ENST00000311106 CCER1Q8TC90 406 aaPredicted RBP15.2■□□□□ 0.02
PCSK1-201ENST00000311106 EHMT2Q96KQ7 1210 aa15.18■□□□□ 0.02
PCSK1-201ENST00000311106 ERICH6Q7L0X2 663 aa14.98□□□□□ -0.01
PCSK1-201ENST00000311106 ATP1B4Q9UN42 357 aaPredicted RBP14.94□□□□□ -0.02
PCSK1-201ENST00000311106 ZEB1P37275 1124 aaPredicted RBP14.91□□□□□ -0.02
PCSK1-201ENST00000311106 CENPBP07199 599 aaPredicted RBP14.9□□□□□ -0.02
PCSK1-201ENST00000311106 TRIM41Q8WV44 630 aa14.82□□□□□ -0.04
PCSK1-201ENST00000311106 NEFLP07196 543 aa14.8□□□□□ -0.04
PCSK1-201ENST00000311106 UBTFP17480 764 aaKnown RBP14.79□□□□□ -0.04
PCSK1-201ENST00000311106 RANGAP1P46060 587 aaPredicted RBP14.74□□□□□ -0.05
PCSK1-201ENST00000311106 PCGF6Q9BYE7 350 aa14.73□□□□□ -0.05
PCSK1-201ENST00000311106 TTBK1Q5TCY1 1321 aaPredicted RBP14.71□□□□□ -0.05
PCSK1-201ENST00000311106 MYT1LQ9UL68 1186 aa14.7□□□□□ -0.06
PCSK1-201ENST00000311106 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.56□□□□□ -0.08
PCSK1-201ENST00000311106 HNRNPUL2Q1KMD3 747 aaKnown RBP14.56□□□□□ -0.08
PCSK1-201ENST00000311106 DAXXQ9UER7 740 aaPredicted RBP14.51□□□□□ -0.09
PCSK1-201ENST00000311106 MYT1Q01538 1121 aa14.37□□□□□ -0.11
PCSK1-201ENST00000311106 YTHDC1Q96MU7 727 aaKnown RBP14.36□□□□□ -0.11
PCSK1-201ENST00000311106 POLR3GLQ9BT43 218 aa14.28□□□□□ -0.12
PCSK1-201ENST00000311106 SLC4A1APQ9BWU0 796 aaKnown RBP14.23□□□□□ -0.13
PCSK1-201ENST00000311106 ITGAEP38570 1179 aa14.16□□□□□ -0.14
PCSK1-201ENST00000311106 TRIM26Q12899 539 aaPredicted RBP14.12□□□□□ -0.15
PCSK1-201ENST00000311106 CHIC1Q5VXU3 224 aa14.12□□□□□ -0.15
PCSK1-201ENST00000311106 ZBTB47Q9UFB7 747 aaPredicted RBP14.11□□□□□ -0.15
PCSK1-201ENST00000311106 CLSPNQ9HAW4 1339 aa14.11□□□□□ -0.15
PCSK1-201ENST00000311106 ZNF316A6NFI3 1004 aaPredicted RBP14.05□□□□□ -0.16
PCSK1-201ENST00000311106 NEFMP07197 916 aa14.04□□□□□ -0.16
PCSK1-201ENST00000311106 RTL5Q5HYW3 569 aaPredicted RBP13.97□□□□□ -0.17
PCSK1-201ENST00000311106 TRIM52Q96A61 297 aa13.96□□□□□ -0.17
PCSK1-201ENST00000311106 ESF1Q9H501 851 aaKnown RBP13.93□□□□□ -0.18
PCSK1-201ENST00000311106 FAM50AQ14320 339 aaKnown RBP13.91□□□□□ -0.18
PCSK1-201ENST00000311106 PPARGC1BQ86YN6 1023 aaKnown RBP13.9□□□□□ -0.18
PCSK1-201ENST00000311106 BCANQ96GW7 911 aa13.88□□□□□ -0.19
PCSK1-201ENST00000311106 CNGB1Q14028 1251 aaPredicted RBP13.88□□□□□ -0.19
PCSK1-201ENST00000311106 CDK11AQ9UQ88 783 aaPredicted RBP13.86□□□□□ -0.19
PCSK1-201ENST00000311106 FBLN2P98095 1184 aa13.85□□□□□ -0.19
PCSK1-201ENST00000311106 NPM1P06748 294 aaKnown RBP eCLIP13.8□□□□□ -0.2
PCSK1-201ENST00000311106 HRCP23327 699 aa13.79□□□□□ -0.2
PCSK1-201ENST00000311106 SLC24A1O60721 1099 aa13.79□□□□□ -0.2
PCSK1-201ENST00000311106 CANXP27824 592 aaKnown RBP13.76□□□□□ -0.21
PCSK1-201ENST00000311106 ANP32CO43423 234 aa13.73□□□□□ -0.21
PCSK1-201ENST00000311106 ZNF326Q5BKZ1 582 aaKnown RBP13.71□□□□□ -0.21
PCSK1-201ENST00000311106 STAG3Q9UJ98 1225 aa13.69□□□□□ -0.22
PCSK1-201ENST00000311106 PABPN1Q86U42 306 aaKnown RBP eCLIP13.69□□□□□ -0.22
PCSK1-201ENST00000311106 ABCC9O60706 1549 aa13.66□□□□□ -0.22
PCSK1-201ENST00000311106 NEUROD1Q13562 356 aa13.64□□□□□ -0.23
PCSK1-201ENST00000311106 DIEXFQ68CQ4 756 aaKnown RBP13.59□□□□□ -0.23
PCSK1-201ENST00000311106 LOC105371045A0A1W2PR82 267 aa13.56□□□□□ -0.24
PCSK1-201ENST00000311106 NPM2Q86SE8 214 aaKnown RBP13.56□□□□□ -0.24
PCSK1-201ENST00000311106 ANP32BQ92688 251 aaKnown RBP13.54□□□□□ -0.24
PCSK1-201ENST00000311106 ZNF777Q9ULD5 760 aaPredicted RBP13.53□□□□□ -0.24
PCSK1-201ENST00000311106 CHGAP10645 457 aaKnown RBP13.5□□□□□ -0.25
PCSK1-201ENST00000311106 UPF2Q9HAU5 1272 aaKnown RBP13.49□□□□□ -0.25
PCSK1-201ENST00000311106 ACIN1Q9UKV3 1341 aaKnown RBP13.47□□□□□ -0.25
PCSK1-201ENST00000311106 CSRNP3Q8WYN3 585 aa13.45□□□□□ -0.26
PCSK1-201ENST00000311106 ANP32AP39687 249 aaKnown RBP13.44□□□□□ -0.26
PCSK1-201ENST00000311106 HSP90AA1P07900 732 aaKnown RBP13.44□□□□□ -0.26
PCSK1-201ENST00000311106 CDK11BP21127 795 aaKnown RBP13.43□□□□□ -0.26
PCSK1-201ENST00000311106 BCL11AQ9H165 835 aa13.42□□□□□ -0.26
PCSK1-201ENST00000311106 TSPY4P0CV99 314 aa13.41□□□□□ -0.26
PCSK1-201ENST00000311106 TSPY10P0CW01 314 aa13.41□□□□□ -0.26
PCSK1-201ENST00000311106 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.41□□□□□ -0.26
PCSK1-201ENST00000311106 TONSLQ96HA7 1378 aa13.37□□□□□ -0.27
PCSK1-201ENST00000311106 P3H3Q8IVL6 736 aa13.37□□□□□ -0.27
PCSK1-201ENST00000311106 ARID3CA6NKF2 412 aa13.35□□□□□ -0.27
PCSK1-201ENST00000311106 PLPPR3Q6T4P5 718 aa13.32□□□□□ -0.28
PCSK1-201ENST00000311106 MYH16Q9H6N6 1097 aa13.32□□□□□ -0.28
PCSK1-201ENST00000311106 EIF5BO60841 1220 aaKnown RBP13.3□□□□□ -0.28
PCSK1-201ENST00000311106 PPP1R15AO75807 674 aaPredicted RBP13.29□□□□□ -0.28
PCSK1-201ENST00000311106 SCAF1Q9H7N4 1312 aaKnown RBP13.29□□□□□ -0.28
PCSK1-201ENST00000311106 WDR43Q15061 677 aaKnown RBP eCLIP13.28□□□□□ -0.28
PCSK1-201ENST00000311106 CHMP7Q8WUX9 453 aaPredicted RBP13.28□□□□□ -0.28
PCSK1-201ENST00000311106 C14orf37Q86TY3 774 aa13.27□□□□□ -0.29
PCSK1-201ENST00000311106 HAP1P54257 671 aaPredicted RBP13.26□□□□□ -0.29
PCSK1-201ENST00000311106 A0A0G2JS52 829 aa13.25□□□□□ -0.29
PCSK1-201ENST00000311106 TMC1Q8TDI8 760 aa13.22□□□□□ -0.29
PCSK1-201ENST00000311106 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.21□□□□□ -0.29
PCSK1-201ENST00000311106 CDCA8Q53HL2 280 aa13.21□□□□□ -0.29
PCSK1-201ENST00000311106 MTUS2Q5JR59 1369 aa13.18□□□□□ -0.3
PCSK1-201ENST00000311106 PLEKHD1A6NEE1 506 aa13.17□□□□□ -0.3
PCSK1-201ENST00000311106 CFAP53Q96M91 514 aa13.17□□□□□ -0.3
PCSK1-201ENST00000311106 ANP32EQ9BTT0 268 aa13.14□□□□□ -0.31
PCSK1-201ENST00000311106 ARID4BQ4LE39 1312 aaPredicted RBP13.13□□□□□ -0.31
PCSK1-201ENST00000311106 NCLP19338 710 aaKnown RBP13.13□□□□□ -0.31
PCSK1-201ENST00000311106 RSF1Q96T23 1441 aaPredicted RBP13.12□□□□□ -0.31
PCSK1-201ENST00000311106 HDGFP51858 240 aaKnown RBP13.11□□□□□ -0.31
PCSK1-201ENST00000311106 HNRNPUQ00839 825 aaKnown RBP eCLIP13.11□□□□□ -0.31
PCSK1-201ENST00000311106 CHMP4BQ9H444 224 aaKnown RBP13.1□□□□□ -0.31
PCSK1-201ENST00000311106 EIF4G2P78344 907 aaKnown RBP eCLIP13.1□□□□□ -0.31
PCSK1-201ENST00000311106 ZRSR1Q15695 479 aaKnown RBP13.09□□□□□ -0.31
PCSK1-201ENST00000311106 GTF3C3Q9Y5Q9 886 aa13.08□□□□□ -0.32
PCSK1-201ENST00000311106 GLIPR1L2Q4G1C9 344 aa13.08□□□□□ -0.32
PCSK1-201ENST00000311106 CCDC136Q96JN2 1154 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms