Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AC091133.4-201ENST00000511142 308 ntBASIC6.58□□□□□ -1.36
SHKBP1Q8TBC3 AC109445.1-201ENST00000512356 383 ntBASIC6.58□□□□□ -1.36
SHKBP1Q8TBC3 RN7SKP141-201ENST00000516167 338 ntBASIC6.58□□□□□ -1.36
SHKBP1Q8TBC3 RNU6-1045P-201ENST00000516321 107 ntBASIC6.58□□□□□ -1.36
SHKBP1Q8TBC3 Y_RNA.675-201ENST00000516389 149 ntBASIC6.58□□□□□ -1.36
SHKBP1Q8TBC3 RNA5SP340-201ENST00000517132 107 ntBASIC6.58□□□□□ -1.36
SHKBP1Q8TBC3 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC6.58□□□□□ -1.36
SHKBP1Q8TBC3 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC6.58□□□□□ -1.36
SHKBP1Q8TBC3 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC6.58□□□□□ -1.36
SHKBP1Q8TBC3 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC6.58□□□□□ -1.36
SHKBP1Q8TBC3 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SHKBP1Q8TBC3 CYP2C60P-201ENST00000566088 139 ntBASIC6.58□□□□□ -1.36
SHKBP1Q8TBC3 MIR4301-201ENST00000577203 66 ntBASIC6.58□□□□□ -1.36
SHKBP1Q8TBC3 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC6.58□□□□□ -1.36
SHKBP1Q8TBC3 AC060780.3-201ENST00000589464 80 ntBASIC6.58□□□□□ -1.36
SHKBP1Q8TBC3 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC6.58□□□□□ -1.36
SHKBP1Q8TBC3 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC6.58□□□□□ -1.36
SHKBP1Q8TBC3 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.58□□□□□ -1.36
SHKBP1Q8TBC3 AL161729.3-201ENST00000603533 673 ntBASIC6.58□□□□□ -1.36
SHKBP1Q8TBC3 AP001823.1-201ENST00000604056 1003 ntBASIC6.58□□□□□ -1.36
SHKBP1Q8TBC3 AC009220.3-201ENST00000604318 586 ntBASIC6.58□□□□□ -1.36
SHKBP1Q8TBC3 AL360085.1-201ENST00000604713 532 ntBASIC6.58□□□□□ -1.36
SHKBP1Q8TBC3 AC098614.4-201ENST00000607601 462 ntBASIC6.58□□□□□ -1.36
SHKBP1Q8TBC3 AC019193.2-201ENST00000610012 634 ntBASIC6.58□□□□□ -1.36
SHKBP1Q8TBC3 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.58□□□□□ -1.36
SHKBP1Q8TBC3 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.58□□□□□ -1.36
SHKBP1Q8TBC3 MIR6729-201ENST00000618194 65 ntBASIC6.58□□□□□ -1.36
SHKBP1Q8TBC3 AC090574.1-201ENST00000623186 233 ntBASIC6.58□□□□□ -1.36
SHKBP1Q8TBC3 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.58□□□□□ -1.36
SHKBP1Q8TBC3 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
SHKBP1Q8TBC3 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SHKBP1Q8TBC3 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SHKBP1Q8TBC3 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SHKBP1Q8TBC3 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
SHKBP1Q8TBC3 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SHKBP1Q8TBC3 AL359922.3-201ENST00000624779 1670 ntBASIC6.58□□□□□ -1.36
SHKBP1Q8TBC3 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SHKBP1Q8TBC3 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SHKBP1Q8TBC3 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
SHKBP1Q8TBC3 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SHKBP1Q8TBC3 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SHKBP1Q8TBC3 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SHKBP1Q8TBC3 KARSP1-201ENST00000451871 1752 ntBASIC6.57□□□□□ -1.36
SHKBP1Q8TBC3 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SHKBP1Q8TBC3 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SHKBP1Q8TBC3 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
SHKBP1Q8TBC3 AC137056.2-201ENST00000624055 1958 ntBASIC6.57□□□□□ -1.36
SHKBP1Q8TBC3 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.57□□□□□ -1.36
SHKBP1Q8TBC3 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SHKBP1Q8TBC3 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC6.57□□□□□ -1.36
SHKBP1Q8TBC3 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SHKBP1Q8TBC3 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC6.57□□□□□ -1.36
SHKBP1Q8TBC3 RN7SKP78-201ENST00000364711 318 ntBASIC6.57□□□□□ -1.36
SHKBP1Q8TBC3 Y_RNA.529-201ENST00000384586 119 ntBASIC6.57□□□□□ -1.36
SHKBP1Q8TBC3 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SHKBP1Q8TBC3 NRBF2P2-201ENST00000413087 861 ntBASIC6.57□□□□□ -1.36
SHKBP1Q8TBC3 LINC00993-201ENST00000420453 540 ntBASIC6.57□□□□□ -1.36
SHKBP1Q8TBC3 RPS3P2-201ENST00000421346 701 ntBASIC6.57□□□□□ -1.36
SHKBP1Q8TBC3 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.57□□□□□ -1.36
SHKBP1Q8TBC3 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC6.57□□□□□ -1.36
SHKBP1Q8TBC3 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC6.57□□□□□ -1.36
SHKBP1Q8TBC3 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.57□□□□□ -1.36
SHKBP1Q8TBC3 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC6.57□□□□□ -1.36
SHKBP1Q8TBC3 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6.57□□□□□ -1.36
SHKBP1Q8TBC3 HLA-DPA3-207ENST00000454398 229 ntBASIC6.57□□□□□ -1.36
SHKBP1Q8TBC3 AC098847.1-201ENST00000473094 348 ntBASIC6.57□□□□□ -1.36
SHKBP1Q8TBC3 AC079841.1-201ENST00000481228 950 ntBASIC6.57□□□□□ -1.36
SHKBP1Q8TBC3 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC6.57□□□□□ -1.36
SHKBP1Q8TBC3 HMGB1P44-201ENST00000508597 572 ntBASIC6.57□□□□□ -1.36
SHKBP1Q8TBC3 RN7SKP238-201ENST00000516483 249 ntBASIC6.57□□□□□ -1.36
SHKBP1Q8TBC3 IGKV1D-22-201ENST00000518953 324 ntBASIC6.57□□□□□ -1.36
SHKBP1Q8TBC3 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SHKBP1Q8TBC3 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC6.57□□□□□ -1.36
SHKBP1Q8TBC3 AC004825.1-201ENST00000555068 586 ntBASIC6.57□□□□□ -1.36
SHKBP1Q8TBC3 AC012146.2-201ENST00000576545 416 ntBASIC6.57□□□□□ -1.36
SHKBP1Q8TBC3 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.57□□□□□ -1.36
SHKBP1Q8TBC3 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC6.57□□□□□ -1.36
SHKBP1Q8TBC3 AC010928.3-201ENST00000587712 541 ntBASIC6.57□□□□□ -1.36
SHKBP1Q8TBC3 AC008752.3-201ENST00000588113 712 ntBASIC6.57□□□□□ -1.36
SHKBP1Q8TBC3 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC6.57□□□□□ -1.36
SHKBP1Q8TBC3 VN1R79P-201ENST00000593540 513 ntBASIC6.57□□□□□ -1.36
SHKBP1Q8TBC3 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC6.57□□□□□ -1.36
SHKBP1Q8TBC3 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.57□□□□□ -1.36
SHKBP1Q8TBC3 AC013553.2-201ENST00000604244 589 ntBASIC6.57□□□□□ -1.36
SHKBP1Q8TBC3 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC6.57□□□□□ -1.36
SHKBP1Q8TBC3 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC6.57□□□□□ -1.36
SHKBP1Q8TBC3 AL008723.3-201ENST00000608926 449 ntBASIC6.57□□□□□ -1.36
SHKBP1Q8TBC3 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.57□□□□□ -1.36
SHKBP1Q8TBC3 RFPL4AP6-201ENST00000616792 846 ntBASIC6.57□□□□□ -1.36
SHKBP1Q8TBC3 AL158209.2-201ENST00000619266 216 ntBASIC6.57□□□□□ -1.36
SHKBP1Q8TBC3 AF001550.2-201ENST00000636643 217 ntBASIC6.57□□□□□ -1.36
SHKBP1Q8TBC3 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC6.57□□□□□ -1.36
SHKBP1Q8TBC3 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SHKBP1Q8TBC3 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.57□□□□□ -1.36
SHKBP1Q8TBC3 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SHKBP1Q8TBC3 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC6.57□□□□□ -1.36
SHKBP1Q8TBC3 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SHKBP1Q8TBC3 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SHKBP1Q8TBC3 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC6.57□□□□□ -1.36
SHKBP1Q8TBC3 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms