RNA–Protein interactions for RNA: ENST00000608220.5

LINC00343-210, long intergenic non-protein coding RNA 343, humanhuman

TSL 5 BASIC

Gene LINC00343, Length 806 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-210ENST00000608220 AEBP2Q6ZN18 517 aaPredicted RBP22.2■■□□□ 1.14
LINC00343-210ENST00000608220 CHIC1Q5VXU3 224 aa21.37■■□□□ 1.01
LINC00343-210ENST00000608220 SENP3Q9H4L4 574 aaPredicted RBP18.92■□□□□ 0.62
LINC00343-210ENST00000608220 PHF23Q9BUL5 403 aaPredicted RBP18.75■□□□□ 0.59
LINC00343-210ENST00000608220 FOXD1Q16676 465 aa17.59■□□□□ 0.41
LINC00343-210ENST00000608220 PLPPR3Q6T4P5 718 aa17.23■□□□□ 0.35
LINC00343-210ENST00000608220 ADRA2BP18089 450 aa16.67■□□□□ 0.26
LINC00343-210ENST00000608220 PPP6R1Q9UPN7 881 aa16.67■□□□□ 0.26
LINC00343-210ENST00000608220 PIAS4Q8N2W9 510 aaPredicted RBP16.55■□□□□ 0.24
LINC00343-210ENST00000608220 MSH5O43196 834 aa16.36■□□□□ 0.21
LINC00343-210ENST00000608220 POTEDQ86YR6 584 aa16.29■□□□□ 0.2
LINC00343-210ENST00000608220 SCAF1Q9H7N4 1312 aaKnown RBP15.27■□□□□ 0.04
LINC00343-210ENST00000608220 MAPK8IP2Q13387 824 aaPredicted RBP15.22■□□□□ 0.03
LINC00343-210ENST00000608220 PPP4R3CPQ6ZMV5 832 aa15.15■□□□□ 0.02
LINC00343-210ENST00000608220 DMRT2Q9Y5R5 561 aa15.03■□□□□ -0
LINC00343-210ENST00000608220 CNKSR2Q8WXI2 1034 aa14.79□□□□□ -0.04
LINC00343-210ENST00000608220 NCBP3Q53F19 620 aaKnown RBP14.68□□□□□ -0.06
LINC00343-210ENST00000608220 HOXD11P31277 338 aaPredicted RBP14.57□□□□□ -0.08
LINC00343-210ENST00000608220 RNF216Q9NWF9 866 aaPredicted RBP14.56□□□□□ -0.08
LINC00343-210ENST00000608220 DCAF8L1A6NGE4 600 aa14.53□□□□□ -0.08
LINC00343-210ENST00000608220 NPM3O75607 178 aaKnown RBP14.43□□□□□ -0.1
LINC00343-210ENST00000608220 KCNA4P22459 653 aa14.43□□□□□ -0.1
LINC00343-210ENST00000608220 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.99□□□□□ -0.17
LINC00343-210ENST00000608220 RNF39Q9H2S5 420 aa13.96□□□□□ -0.17
LINC00343-210ENST00000608220 DNAJC5BQ9UF47 199 aa13.96□□□□□ -0.17
LINC00343-210ENST00000608220 CACNB1Q02641 598 aaPredicted RBP13.92□□□□□ -0.18
LINC00343-210ENST00000608220 C1QBPQ07021 282 aaKnown RBP13.79□□□□□ -0.2
LINC00343-210ENST00000608220 SLC4A1APQ9BWU0 796 aaKnown RBP13.71□□□□□ -0.21
LINC00343-210ENST00000608220 SLC4A2P04920 1241 aa13.69□□□□□ -0.22
LINC00343-210ENST00000608220 U3KPZ7 1027 aaPredicted RBP13.65□□□□□ -0.22
LINC00343-210ENST00000608220 CAPN15O75808 1086 aa13.41□□□□□ -0.26
LINC00343-210ENST00000608220 SPINK5Q9NQ38 1064 aaPredicted RBP13.4□□□□□ -0.26
LINC00343-210ENST00000608220 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.39□□□□□ -0.27
LINC00343-210ENST00000608220 HNRNPUL2Q1KMD3 747 aaKnown RBP13.39□□□□□ -0.27
LINC00343-210ENST00000608220 FOXD4L1Q9NU39 408 aa13.37□□□□□ -0.27
LINC00343-210ENST00000608220 MYCNP04198 464 aaPredicted RBP13.35□□□□□ -0.27
LINC00343-210ENST00000608220 APLP2Q06481 763 aa13.35□□□□□ -0.27
LINC00343-210ENST00000608220 SAMD1Q6SPF0 538 aaPredicted RBP13.33□□□□□ -0.28
LINC00343-210ENST00000608220 TRHP20396 242 aaPredicted RBP13.27□□□□□ -0.29
LINC00343-210ENST00000608220 ZBTB22O15209 634 aa13.24□□□□□ -0.29
LINC00343-210ENST00000608220 ZNF219Q9P2Y4 722 aaPredicted RBP13.21□□□□□ -0.29
LINC00343-210ENST00000608220 DSG3P32926 999 aa13.19□□□□□ -0.3
LINC00343-210ENST00000608220 ABCB7O75027 752 aa13.12□□□□□ -0.31
LINC00343-210ENST00000608220 ATF5Q9Y2D1 282 aaPredicted RBP13.01□□□□□ -0.33
LINC00343-210ENST00000608220 EHMT2Q96KQ7 1210 aa12.98□□□□□ -0.33
LINC00343-210ENST00000608220 POLA2Q14181 598 aa12.94□□□□□ -0.34
LINC00343-210ENST00000608220 ATXN8OSP0DMR3 200 aa12.91□□□□□ -0.34
LINC00343-210ENST00000608220 CSRNP3Q8WYN3 585 aa12.91□□□□□ -0.34
LINC00343-210ENST00000608220 ZBTB12Q9Y330 459 aaPredicted RBP12.69□□□□□ -0.38
LINC00343-210ENST00000608220 POTEHQ6S545 545 aa12.68□□□□□ -0.38
LINC00343-210ENST00000608220 RBM42Q9BTD8 480 aaKnown RBP12.6□□□□□ -0.39
LINC00343-210ENST00000608220 FBLN2P98095 1184 aa12.54□□□□□ -0.4
LINC00343-210ENST00000608220 OSCARQ8IYS5 282 aa12.51□□□□□ -0.41
LINC00343-210ENST00000608220 MKRN4PQ13434 485 aaPredicted RBP12.41□□□□□ -0.42
LINC00343-210ENST00000608220 AKT1S1Q96B36 256 aa12.36□□□□□ -0.43
LINC00343-210ENST00000608220 SPDYE2BA6NHP3 402 aa12.31□□□□□ -0.44
LINC00343-210ENST00000608220 SPDYE6P0CI01 402 aa12.31□□□□□ -0.44
LINC00343-210ENST00000608220 SPDYE2Q495Y8 402 aa12.31□□□□□ -0.44
LINC00343-210ENST00000608220 ZNF692Q9BU19 519 aaPredicted RBP12.26□□□□□ -0.45
LINC00343-210ENST00000608220 REM2Q8IYK8 340 aaPredicted RBP12.25□□□□□ -0.45
LINC00343-210ENST00000608220 CHRDL2Q6WN34 429 aa12.21□□□□□ -0.45
LINC00343-210ENST00000608220 SSUH2Q9Y2M2 353 aa12.14□□□□□ -0.47
LINC00343-210ENST00000608220 PITPNM1O00562 1244 aa12.12□□□□□ -0.47
LINC00343-210ENST00000608220 PABPN1Q86U42 306 aaKnown RBP eCLIP12.07□□□□□ -0.48
LINC00343-210ENST00000608220 CLEC11AQ9Y240 323 aa12.07□□□□□ -0.48
LINC00343-210ENST00000608220 SPDYE1Q8NFV5 336 aaPredicted RBP12.05□□□□□ -0.48
LINC00343-210ENST00000608220 SPDYE4A6NLX3 237 aa12.03□□□□□ -0.48
LINC00343-210ENST00000608220 PIP4P2Q8N4L2 257 aa11.98□□□□□ -0.49
LINC00343-210ENST00000608220 FXR2P51116 673 aaKnown RBP eCLIP11.93□□□□□ -0.5
LINC00343-210ENST00000608220 PRR29P0C7W0 189 aa11.89□□□□□ -0.51
LINC00343-210ENST00000608220 PRKAR2AP13861 404 aaKnown RBP11.83□□□□□ -0.52
LINC00343-210ENST00000608220 STAG3Q9UJ98 1225 aa11.8□□□□□ -0.52
LINC00343-210ENST00000608220 CHADLQ6NUI6 762 aa11.77□□□□□ -0.53
LINC00343-210ENST00000608220 FKBP8Q14318 412 aa11.75□□□□□ -0.53
LINC00343-210ENST00000608220 HAX1O00165 279 aa11.74□□□□□ -0.53
LINC00343-210ENST00000608220 PROM2Q8N271 834 aa11.68□□□□□ -0.54
LINC00343-210ENST00000608220 SP7Q8TDD2 431 aaPredicted RBP11.63□□□□□ -0.55
LINC00343-210ENST00000608220 CREBZFQ9NS37 354 aa11.6□□□□□ -0.55
LINC00343-210ENST00000608220 FARP1Q9Y4F1 1045 aaPredicted RBP11.6□□□□□ -0.55
LINC00343-210ENST00000608220 EVX2Q03828 476 aa11.55□□□□□ -0.56
LINC00343-210ENST00000608220 C19orf67A6NJJ6 358 aa11.53□□□□□ -0.56
LINC00343-210ENST00000608220 CD44P16070 742 aaKnown RBP11.48□□□□□ -0.57
LINC00343-210ENST00000608220 MIER1Q8N108 512 aa11.48□□□□□ -0.57
LINC00343-210ENST00000608220 PLEKHG5O94827 1062 aa11.46□□□□□ -0.57
LINC00343-210ENST00000608220 NPM1P06748 294 aaKnown RBP eCLIP11.45□□□□□ -0.58
LINC00343-210ENST00000608220 PLCD3Q8N3E9 789 aa11.44□□□□□ -0.58
LINC00343-210ENST00000608220 MNX1P50219 401 aaPredicted RBP11.4□□□□□ -0.58
LINC00343-210ENST00000608220 FBXO3Q9UK99 471 aa11.4□□□□□ -0.58
LINC00343-210ENST00000608220 ZRANB1Q9UGI0 708 aa11.38□□□□□ -0.59
LINC00343-210ENST00000608220 PAK3O75914 559 aaPredicted RBP11.36□□□□□ -0.59
LINC00343-210ENST00000608220 GABBR2O75899 941 aa11.32□□□□□ -0.6
LINC00343-210ENST00000608220 ZBTB47Q9UFB7 747 aaPredicted RBP11.29□□□□□ -0.6
LINC00343-210ENST00000608220 TSPYL2Q9H2G4 693 aaPredicted RBP11.28□□□□□ -0.6
LINC00343-210ENST00000608220 ZNF579Q8NAF0 562 aaKnown RBP11.27□□□□□ -0.61
LINC00343-210ENST00000608220 VASPP50552 380 aaPredicted RBP11.25□□□□□ -0.61
LINC00343-210ENST00000608220 PHF12Q96QT6 1004 aa11.23□□□□□ -0.61
LINC00343-210ENST00000608220 CLCN6P51797 869 aa11.22□□□□□ -0.61
LINC00343-210ENST00000608220 KLHL34Q8N239 644 aa11.21□□□□□ -0.61
LINC00343-210ENST00000608220 RASEFQ8IZ41 740 aa11.2□□□□□ -0.62
LINC00343-210ENST00000608220 NUBP1P53384 320 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms