RNA–Protein interactions for RNA: ENST00000553561.1

AL355096.1-201, humanhuman

TSL 3 BASIC

Gene AL355096.1, Length 447 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL355096.1-201ENST00000553561 AEBP2Q6ZN18 517 aaPredicted RBP23.61■■□□□ 1.37
AL355096.1-201ENST00000553561 CHIC1Q5VXU3 224 aa22.46■■□□□ 1.19
AL355096.1-201ENST00000553561 SENP3Q9H4L4 574 aaPredicted RBP20.01■□□□□ 0.79
AL355096.1-201ENST00000553561 PHF23Q9BUL5 403 aaPredicted RBP19.78■□□□□ 0.76
AL355096.1-201ENST00000553561 FOXD1Q16676 465 aa18.7■□□□□ 0.58
AL355096.1-201ENST00000553561 PLPPR3Q6T4P5 718 aa17.93■□□□□ 0.46
AL355096.1-201ENST00000553561 PPP6R1Q9UPN7 881 aa17.59■□□□□ 0.41
AL355096.1-201ENST00000553561 ADRA2BP18089 450 aa17.47■□□□□ 0.39
AL355096.1-201ENST00000553561 PIAS4Q8N2W9 510 aaPredicted RBP17.4■□□□□ 0.38
AL355096.1-201ENST00000553561 MSH5O43196 834 aa17.38■□□□□ 0.37
AL355096.1-201ENST00000553561 POTEDQ86YR6 584 aa16.84■□□□□ 0.29
AL355096.1-201ENST00000553561 MAPK8IP2Q13387 824 aaPredicted RBP16.04■□□□□ 0.16
AL355096.1-201ENST00000553561 DMRT2Q9Y5R5 561 aa15.94■□□□□ 0.14
AL355096.1-201ENST00000553561 SCAF1Q9H7N4 1312 aaKnown RBP15.89■□□□□ 0.13
AL355096.1-201ENST00000553561 PPP4R3CPQ6ZMV5 832 aa15.74■□□□□ 0.11
AL355096.1-201ENST00000553561 HOXD11P31277 338 aaPredicted RBP15.42■□□□□ 0.06
AL355096.1-201ENST00000553561 CNKSR2Q8WXI2 1034 aa15.41■□□□□ 0.06
AL355096.1-201ENST00000553561 RNF216Q9NWF9 866 aaPredicted RBP15.29■□□□□ 0.04
AL355096.1-201ENST00000553561 NCBP3Q53F19 620 aaKnown RBP15.08■□□□□ 0
AL355096.1-201ENST00000553561 DCAF8L1A6NGE4 600 aa15.06■□□□□ 0
AL355096.1-201ENST00000553561 NPM3O75607 178 aaKnown RBP14.99□□□□□ -0.01
AL355096.1-201ENST00000553561 RNF39Q9H2S5 420 aa14.91□□□□□ -0.02
AL355096.1-201ENST00000553561 DNAJC5BQ9UF47 199 aa14.9□□□□□ -0.02
AL355096.1-201ENST00000553561 KCNA4P22459 653 aa14.78□□□□□ -0.04
AL355096.1-201ENST00000553561 CACNB1Q02641 598 aaPredicted RBP14.78□□□□□ -0.04
AL355096.1-201ENST00000553561 C1QBPQ07021 282 aaKnown RBP14.65□□□□□ -0.06
AL355096.1-201ENST00000553561 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.52□□□□□ -0.09
AL355096.1-201ENST00000553561 U3KPZ7 1027 aaPredicted RBP14.37□□□□□ -0.11
AL355096.1-201ENST00000553561 SLC4A2P04920 1241 aa14.34□□□□□ -0.11
AL355096.1-201ENST00000553561 SPINK5Q9NQ38 1064 aaPredicted RBP14.1□□□□□ -0.15
AL355096.1-201ENST00000553561 DSG3P32926 999 aa13.99□□□□□ -0.17
AL355096.1-201ENST00000553561 CAPN15O75808 1086 aa13.95□□□□□ -0.18
AL355096.1-201ENST00000553561 SLC4A1APQ9BWU0 796 aaKnown RBP13.9□□□□□ -0.18
AL355096.1-201ENST00000553561 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.87□□□□□ -0.19
AL355096.1-201ENST00000553561 HNRNPUL2Q1KMD3 747 aaKnown RBP13.87□□□□□ -0.19
AL355096.1-201ENST00000553561 SAMD1Q6SPF0 538 aaPredicted RBP13.83□□□□□ -0.2
AL355096.1-201ENST00000553561 MYCNP04198 464 aaPredicted RBP13.81□□□□□ -0.2
AL355096.1-201ENST00000553561 APLP2Q06481 763 aa13.81□□□□□ -0.2
AL355096.1-201ENST00000553561 ZNF219Q9P2Y4 722 aaPredicted RBP13.78□□□□□ -0.2
AL355096.1-201ENST00000553561 TRHP20396 242 aaPredicted RBP13.76□□□□□ -0.21
AL355096.1-201ENST00000553561 FOXD4L1Q9NU39 408 aa13.72□□□□□ -0.21
AL355096.1-201ENST00000553561 ZBTB22O15209 634 aa13.67□□□□□ -0.22
AL355096.1-201ENST00000553561 ABCB7O75027 752 aa13.67□□□□□ -0.22
AL355096.1-201ENST00000553561 ATF5Q9Y2D1 282 aaPredicted RBP13.56□□□□□ -0.24
AL355096.1-201ENST00000553561 POLA2Q14181 598 aa13.47□□□□□ -0.25
AL355096.1-201ENST00000553561 ATXN8OSP0DMR3 200 aa13.32□□□□□ -0.28
AL355096.1-201ENST00000553561 RBM42Q9BTD8 480 aaKnown RBP13.25□□□□□ -0.29
AL355096.1-201ENST00000553561 POTEHQ6S545 545 aa13.18□□□□□ -0.3
AL355096.1-201ENST00000553561 ZBTB12Q9Y330 459 aaPredicted RBP13.18□□□□□ -0.3
AL355096.1-201ENST00000553561 CSRNP3Q8WYN3 585 aa13.09□□□□□ -0.31
AL355096.1-201ENST00000553561 OSCARQ8IYS5 282 aa13.05□□□□□ -0.32
AL355096.1-201ENST00000553561 AKT1S1Q96B36 256 aa13.01□□□□□ -0.33
AL355096.1-201ENST00000553561 MKRN4PQ13434 485 aaPredicted RBP12.96□□□□□ -0.33
AL355096.1-201ENST00000553561 CHRDL2Q6WN34 429 aa12.95□□□□□ -0.34
AL355096.1-201ENST00000553561 REM2Q8IYK8 340 aaPredicted RBP12.91□□□□□ -0.34
AL355096.1-201ENST00000553561 FBLN2P98095 1184 aa12.86□□□□□ -0.35
AL355096.1-201ENST00000553561 EHMT2Q96KQ7 1210 aa12.83□□□□□ -0.36
AL355096.1-201ENST00000553561 SPDYE2BA6NHP3 402 aa12.82□□□□□ -0.36
AL355096.1-201ENST00000553561 SPDYE6P0CI01 402 aa12.82□□□□□ -0.36
AL355096.1-201ENST00000553561 SPDYE2Q495Y8 402 aa12.82□□□□□ -0.36
AL355096.1-201ENST00000553561 PITPNM1O00562 1244 aa12.77□□□□□ -0.37
AL355096.1-201ENST00000553561 SSUH2Q9Y2M2 353 aa12.74□□□□□ -0.37
AL355096.1-201ENST00000553561 PIP4P2Q8N4L2 257 aa12.7□□□□□ -0.38
AL355096.1-201ENST00000553561 FXR2P51116 673 aaKnown RBP eCLIP12.68□□□□□ -0.38
AL355096.1-201ENST00000553561 ZNF692Q9BU19 519 aaPredicted RBP12.63□□□□□ -0.39
AL355096.1-201ENST00000553561 SPDYE1Q8NFV5 336 aaPredicted RBP12.54□□□□□ -0.4
AL355096.1-201ENST00000553561 PABPN1Q86U42 306 aaKnown RBP eCLIP12.48□□□□□ -0.41
AL355096.1-201ENST00000553561 CLEC11AQ9Y240 323 aa12.44□□□□□ -0.42
AL355096.1-201ENST00000553561 SP7Q8TDD2 431 aaPredicted RBP12.4□□□□□ -0.42
AL355096.1-201ENST00000553561 PRKAR2AP13861 404 aaKnown RBP12.39□□□□□ -0.43
AL355096.1-201ENST00000553561 EVX2Q03828 476 aa12.35□□□□□ -0.43
AL355096.1-201ENST00000553561 HAX1O00165 279 aa12.33□□□□□ -0.44
AL355096.1-201ENST00000553561 SPDYE4A6NLX3 237 aa12.28□□□□□ -0.44
AL355096.1-201ENST00000553561 PRR29P0C7W0 189 aa12.28□□□□□ -0.44
AL355096.1-201ENST00000553561 CHADLQ6NUI6 762 aa12.27□□□□□ -0.45
AL355096.1-201ENST00000553561 C19orf67A6NJJ6 358 aa12.26□□□□□ -0.45
AL355096.1-201ENST00000553561 PROM2Q8N271 834 aa12.18□□□□□ -0.46
AL355096.1-201ENST00000553561 STAG3Q9UJ98 1225 aa12.13□□□□□ -0.47
AL355096.1-201ENST00000553561 FARP1Q9Y4F1 1045 aaPredicted RBP12.13□□□□□ -0.47
AL355096.1-201ENST00000553561 CREBZFQ9NS37 354 aa12.12□□□□□ -0.47
AL355096.1-201ENST00000553561 GABBR2O75899 941 aa12.01□□□□□ -0.49
AL355096.1-201ENST00000553561 MNX1P50219 401 aaPredicted RBP12□□□□□ -0.49
AL355096.1-201ENST00000553561 CD44P16070 742 aaKnown RBP11.99□□□□□ -0.49
AL355096.1-201ENST00000553561 ZNF579Q8NAF0 562 aaKnown RBP11.89□□□□□ -0.51
AL355096.1-201ENST00000553561 POTEIP0CG38 1075 aa11.84□□□□□ -0.51
AL355096.1-201ENST00000553561 CLCN6P51797 869 aa11.84□□□□□ -0.51
AL355096.1-201ENST00000553561 ZRANB1Q9UGI0 708 aa11.82□□□□□ -0.52
AL355096.1-201ENST00000553561 NPM1P06748 294 aaKnown RBP eCLIP11.77□□□□□ -0.53
AL355096.1-201ENST00000553561 FKBP8Q14318 412 aa11.75□□□□□ -0.53
AL355096.1-201ENST00000553561 GALR2O43603 387 aaPredicted RBP11.72□□□□□ -0.53
AL355096.1-201ENST00000553561 PHF12Q96QT6 1004 aa11.72□□□□□ -0.53
AL355096.1-201ENST00000553561 PAK3O75914 559 aaPredicted RBP11.67□□□□□ -0.54
AL355096.1-201ENST00000553561 MIER1Q8N108 512 aa11.64□□□□□ -0.55
AL355096.1-201ENST00000553561 CCDC61Q9Y6R9 512 aa11.64□□□□□ -0.55
AL355096.1-201ENST00000553561 LHX8Q68G74 356 aa11.61□□□□□ -0.55
AL355096.1-201ENST00000553561 RASEFQ8IZ41 740 aa11.6□□□□□ -0.55
AL355096.1-201ENST00000553561 DCBLD2Q96PD2 775 aa11.6□□□□□ -0.55
AL355096.1-201ENST00000553561 MS4A3Q96HJ5 214 aa11.57□□□□□ -0.56
AL355096.1-201ENST00000553561 TSPYL2Q9H2G4 693 aaPredicted RBP11.57□□□□□ -0.56
AL355096.1-201ENST00000553561 NUBP1P53384 320 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms