RNA–Protein interactions for RNA: ENST00000604318.1

AC009220.3-201, humanhuman

BASIC

Gene AC009220.3, Length 586 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009220.3-201ENST00000604318 AEBP2Q6ZN18 517 aaPredicted RBP21.1■□□□□ 0.97
AC009220.3-201ENST00000604318 CHIC1Q5VXU3 224 aa20.74■□□□□ 0.91
AC009220.3-201ENST00000604318 PHF23Q9BUL5 403 aaPredicted RBP18.34■□□□□ 0.53
AC009220.3-201ENST00000604318 SENP3Q9H4L4 574 aaPredicted RBP17.71■□□□□ 0.43
AC009220.3-201ENST00000604318 PLPPR3Q6T4P5 718 aa16.87■□□□□ 0.29
AC009220.3-201ENST00000604318 FOXD1Q16676 465 aa16.5■□□□□ 0.23
AC009220.3-201ENST00000604318 PPP6R1Q9UPN7 881 aa16.1■□□□□ 0.17
AC009220.3-201ENST00000604318 ADRA2BP18089 450 aa16.05■□□□□ 0.16
AC009220.3-201ENST00000604318 PIAS4Q8N2W9 510 aaPredicted RBP15.55■□□□□ 0.08
AC009220.3-201ENST00000604318 POTEDQ86YR6 584 aa15.2■□□□□ 0.02
AC009220.3-201ENST00000604318 MSH5O43196 834 aa15.01□□□□□ -0.01
AC009220.3-201ENST00000604318 PPP4R3CPQ6ZMV5 832 aa14.93□□□□□ -0.02
AC009220.3-201ENST00000604318 KCNA4P22459 653 aa14.9□□□□□ -0.02
AC009220.3-201ENST00000604318 MAPK8IP2Q13387 824 aaPredicted RBP14.52□□□□□ -0.09
AC009220.3-201ENST00000604318 SCAF1Q9H7N4 1312 aaKnown RBP14.51□□□□□ -0.09
AC009220.3-201ENST00000604318 NCBP3Q53F19 620 aaKnown RBP14.49□□□□□ -0.09
AC009220.3-201ENST00000604318 NPM3O75607 178 aaKnown RBP14.43□□□□□ -0.1
AC009220.3-201ENST00000604318 CNKSR2Q8WXI2 1034 aa14.42□□□□□ -0.1
AC009220.3-201ENST00000604318 DMRT2Q9Y5R5 561 aa14.22□□□□□ -0.13
AC009220.3-201ENST00000604318 SLC4A1APQ9BWU0 796 aaKnown RBP14.15□□□□□ -0.14
AC009220.3-201ENST00000604318 RNF216Q9NWF9 866 aaPredicted RBP14.1□□□□□ -0.15
AC009220.3-201ENST00000604318 HOXD11P31277 338 aaPredicted RBP14.03□□□□□ -0.16
AC009220.3-201ENST00000604318 EHMT2Q96KQ7 1210 aa14.03□□□□□ -0.16
AC009220.3-201ENST00000604318 DNAJC5BQ9UF47 199 aa13.99□□□□□ -0.17
AC009220.3-201ENST00000604318 CSRNP3Q8WYN3 585 aa13.84□□□□□ -0.19
AC009220.3-201ENST00000604318 ZBTB22O15209 634 aa13.79□□□□□ -0.2
AC009220.3-201ENST00000604318 SLC4A2P04920 1241 aa13.62□□□□□ -0.23
AC009220.3-201ENST00000604318 FOXD4L1Q9NU39 408 aa13.59□□□□□ -0.23
AC009220.3-201ENST00000604318 DCAF8L1A6NGE4 600 aa13.49□□□□□ -0.25
AC009220.3-201ENST00000604318 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.27□□□□□ -0.29
AC009220.3-201ENST00000604318 MYCNP04198 464 aaPredicted RBP13.26□□□□□ -0.29
AC009220.3-201ENST00000604318 U3KPZ7 1027 aaPredicted RBP13.2□□□□□ -0.3
AC009220.3-201ENST00000604318 ATXN8OSP0DMR3 200 aa13.05□□□□□ -0.32
AC009220.3-201ENST00000604318 ATF5Q9Y2D1 282 aaPredicted RBP13.01□□□□□ -0.33
AC009220.3-201ENST00000604318 RNF39Q9H2S5 420 aa12.97□□□□□ -0.33
AC009220.3-201ENST00000604318 SAMD1Q6SPF0 538 aaPredicted RBP12.95□□□□□ -0.34
AC009220.3-201ENST00000604318 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.94□□□□□ -0.34
AC009220.3-201ENST00000604318 CACNB1Q02641 598 aaPredicted RBP12.94□□□□□ -0.34
AC009220.3-201ENST00000604318 HNRNPUL2Q1KMD3 747 aaKnown RBP12.94□□□□□ -0.34
AC009220.3-201ENST00000604318 SPINK5Q9NQ38 1064 aaPredicted RBP12.77□□□□□ -0.37
AC009220.3-201ENST00000604318 C1QBPQ07021 282 aaKnown RBP12.76□□□□□ -0.37
AC009220.3-201ENST00000604318 APLP2Q06481 763 aa12.71□□□□□ -0.37
AC009220.3-201ENST00000604318 ZNF219Q9P2Y4 722 aaPredicted RBP12.68□□□□□ -0.38
AC009220.3-201ENST00000604318 TRHP20396 242 aaPredicted RBP12.61□□□□□ -0.39
AC009220.3-201ENST00000604318 CAPN15O75808 1086 aa12.6□□□□□ -0.39
AC009220.3-201ENST00000604318 POLA2Q14181 598 aa12.47□□□□□ -0.41
AC009220.3-201ENST00000604318 MKRN4PQ13434 485 aaPredicted RBP12.46□□□□□ -0.41
AC009220.3-201ENST00000604318 ABCB7O75027 752 aa12.43□□□□□ -0.42
AC009220.3-201ENST00000604318 DSG3P32926 999 aa12.42□□□□□ -0.42
AC009220.3-201ENST00000604318 FKBP8Q14318 412 aa12.42□□□□□ -0.42
AC009220.3-201ENST00000604318 FBLN2P98095 1184 aa12.26□□□□□ -0.45
AC009220.3-201ENST00000604318 ZBTB12Q9Y330 459 aaPredicted RBP12.2□□□□□ -0.46
AC009220.3-201ENST00000604318 SPDYE4A6NLX3 237 aa12.17□□□□□ -0.46
AC009220.3-201ENST00000604318 PROM2Q8N271 834 aa12.11□□□□□ -0.47
AC009220.3-201ENST00000604318 OSCARQ8IYS5 282 aa12.09□□□□□ -0.47
AC009220.3-201ENST00000604318 SPDYE2BA6NHP3 402 aa11.96□□□□□ -0.49
AC009220.3-201ENST00000604318 SPDYE6P0CI01 402 aa11.96□□□□□ -0.49
AC009220.3-201ENST00000604318 SPDYE2Q495Y8 402 aa11.96□□□□□ -0.49
AC009220.3-201ENST00000604318 SSUH2Q9Y2M2 353 aa11.96□□□□□ -0.49
AC009220.3-201ENST00000604318 ZNF692Q9BU19 519 aaPredicted RBP11.93□□□□□ -0.5
AC009220.3-201ENST00000604318 POTEHQ6S545 545 aa11.82□□□□□ -0.52
AC009220.3-201ENST00000604318 FBXO3Q9UK99 471 aa11.82□□□□□ -0.52
AC009220.3-201ENST00000604318 PABPN1Q86U42 306 aaKnown RBP eCLIP11.81□□□□□ -0.52
AC009220.3-201ENST00000604318 VASPP50552 380 aaPredicted RBP11.76□□□□□ -0.53
AC009220.3-201ENST00000604318 RTN4Q9NQC3 1192 aaKnown RBP11.76□□□□□ -0.53
AC009220.3-201ENST00000604318 RBM42Q9BTD8 480 aaKnown RBP11.71□□□□□ -0.53
AC009220.3-201ENST00000604318 AMER1Q5JTC6 1135 aaPredicted RBP11.67□□□□□ -0.54
AC009220.3-201ENST00000604318 AKT1S1Q96B36 256 aa11.67□□□□□ -0.54
AC009220.3-201ENST00000604318 IFNLR1Q8IU57 520 aaPredicted RBP11.66□□□□□ -0.54
AC009220.3-201ENST00000604318 STAG3Q9UJ98 1225 aa11.6□□□□□ -0.55
AC009220.3-201ENST00000604318 REM2Q8IYK8 340 aaPredicted RBP11.59□□□□□ -0.55
AC009220.3-201ENST00000604318 SPDYE1Q8NFV5 336 aaPredicted RBP11.52□□□□□ -0.57
AC009220.3-201ENST00000604318 PITPNM1O00562 1244 aa11.48□□□□□ -0.57
AC009220.3-201ENST00000604318 MIER1Q8N108 512 aa11.46□□□□□ -0.57
AC009220.3-201ENST00000604318 PLCD3Q8N3E9 789 aa11.46□□□□□ -0.57
AC009220.3-201ENST00000604318 CLEC11AQ9Y240 323 aa11.46□□□□□ -0.57
AC009220.3-201ENST00000604318 CREBZFQ9NS37 354 aa11.4□□□□□ -0.58
AC009220.3-201ENST00000604318 KLHL34Q8N239 644 aa11.39□□□□□ -0.59
AC009220.3-201ENST00000604318 PRR29P0C7W0 189 aa11.38□□□□□ -0.59
AC009220.3-201ENST00000604318 SPOCK2Q92563 424 aa11.38□□□□□ -0.59
AC009220.3-201ENST00000604318 PKD2Q13563 968 aa11.37□□□□□ -0.59
AC009220.3-201ENST00000604318 MNX1P50219 401 aaPredicted RBP11.36□□□□□ -0.59
AC009220.3-201ENST00000604318 PLEKHG5O94827 1062 aa11.29□□□□□ -0.6
AC009220.3-201ENST00000604318 ZBTB47Q9UFB7 747 aaPredicted RBP11.28□□□□□ -0.6
AC009220.3-201ENST00000604318 NUBP1P53384 320 aa11.26□□□□□ -0.61
AC009220.3-201ENST00000604318 CHADLQ6NUI6 762 aa11.24□□□□□ -0.61
AC009220.3-201ENST00000604318 FXR2P51116 673 aaKnown RBP eCLIP11.22□□□□□ -0.61
AC009220.3-201ENST00000604318 CHRDL2Q6WN34 429 aa11.2□□□□□ -0.62
AC009220.3-201ENST00000604318 RASEFQ8IZ41 740 aa11.16□□□□□ -0.62
AC009220.3-201ENST00000604318 ECM2O94769 699 aaPredicted RBP11.15□□□□□ -0.62
AC009220.3-201ENST00000604318 PRKAR2AP13861 404 aaKnown RBP11.15□□□□□ -0.62
AC009220.3-201ENST00000604318 CIZ1Q9ULV3 898 aaPredicted RBP11.15□□□□□ -0.62
AC009220.3-201ENST00000604318 PIP4P2Q8N4L2 257 aa11.14□□□□□ -0.63
AC009220.3-201ENST00000604318 RGL2O15211 777 aa11.12□□□□□ -0.63
AC009220.3-201ENST00000604318 FARP1Q9Y4F1 1045 aaPredicted RBP11.12□□□□□ -0.63
AC009220.3-201ENST00000604318 NPM1P06748 294 aaKnown RBP eCLIP11.07□□□□□ -0.64
AC009220.3-201ENST00000604318 GSE1Q14687 1217 aa11.07□□□□□ -0.64
AC009220.3-201ENST00000604318 RNF25Q96BH1 459 aaPredicted RBP11.07□□□□□ -0.64
AC009220.3-201ENST00000604318 FAM212AQ96EL1 285 aa11.06□□□□□ -0.64
AC009220.3-201ENST00000604318 DCAF8Q5TAQ9 597 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms