Protein–RNA interactions for Protein: Q9BYQ2

KRTAP9-4, Keratin-associated protein 9-4, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP9-4Q9BYQ2 ARHGAP6-205ENST00000380736 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
KRTAP9-4Q9BYQ2 SLC8A1-205ENST00000405901 3139 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
KRTAP9-4Q9BYQ2 ERCC1-204ENST00000423698 3119 ntTSL 2 BASIC3.18□□□□□ -1.9
KRTAP9-4Q9BYQ2 AC022034.2-201ENST00000426023 2387 ntTSL 2 BASIC3.18□□□□□ -1.9
KRTAP9-4Q9BYQ2 FAM214B-201ENST00000322813 3028 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
KRTAP9-4Q9BYQ2 PLEKHG3-204ENST00000484731 3001 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
KRTAP9-4Q9BYQ2 GRIA2-211ENST00000507898 3041 ntTSL 2 BASIC3.18□□□□□ -1.9
KRTAP9-4Q9BYQ2 PCF11-201ENST00000298281 7677 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
KRTAP9-4Q9BYQ2 ZNF319-201ENST00000299237 4221 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
KRTAP9-4Q9BYQ2 SRSF10-203ENST00000343255 2917 ntAPPRIS ALT1 TSL 2 BASIC3.18□□□□□ -1.9
KRTAP9-4Q9BYQ2 APOL3-202ENST00000361710 3563 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
KRTAP9-4Q9BYQ2 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
KRTAP9-4Q9BYQ2 GGA3-205ENST00000578348 2251 ntTSL 2 BASIC3.18□□□□□ -1.9
KRTAP9-4Q9BYQ2 MFSD6-202ENST00000392328 4797 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
KRTAP9-4Q9BYQ2 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
KRTAP9-4Q9BYQ2 SLC6A6-204ENST00000613060 6526 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
KRTAP9-4Q9BYQ2 ADIPOR2-201ENST00000357103 4018 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
KRTAP9-4Q9BYQ2 IGSF9-202ENST00000368094 4044 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
KRTAP9-4Q9BYQ2 DHFR2-202ENST00000394221 4038 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
KRTAP9-4Q9BYQ2 LIMK1-202ENST00000418310 3360 ntTSL 5 BASIC3.18□□□□□ -1.9
KRTAP9-4Q9BYQ2 SEMA6A-202ENST00000343348 6878 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
KRTAP9-4Q9BYQ2 MAN2C1-201ENST00000267978 3284 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
KRTAP9-4Q9BYQ2 ILK-202ENST00000396751 2074 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
KRTAP9-4Q9BYQ2 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
KRTAP9-4Q9BYQ2 SEZ6L2-203ENST00000350527 3173 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
KRTAP9-4Q9BYQ2 SEPT2-204ENST00000391973 3701 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
KRTAP9-4Q9BYQ2 PSME3-205ENST00000545225 3082 ntTSL 2 BASIC3.18□□□□□ -1.9
KRTAP9-4Q9BYQ2 KCNAB2-203ENST00000352527 4165 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
KRTAP9-4Q9BYQ2 HHAT-208ENST00000545154 3507 ntTSL 2 BASIC3.18□□□□□ -1.9
KRTAP9-4Q9BYQ2 RPH3A-219ENST00000551052 2961 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
KRTAP9-4Q9BYQ2 ASH2L-207ENST00000521652 2433 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
KRTAP9-4Q9BYQ2 HCP5B-201ENST00000630472 1889 ntBASIC3.18□□□□□ -1.9
KRTAP9-4Q9BYQ2 FNDC3B-202ENST00000415807 5083 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
KRTAP9-4Q9BYQ2 LINC00910-202ENST00000586231 2890 ntTSL 2 BASIC3.18□□□□□ -1.9
KRTAP9-4Q9BYQ2 LAMA4-207ENST00000424408 5983 ntAPPRIS P3 TSL 5 BASIC3.18□□□□□ -1.9
KRTAP9-4Q9BYQ2 HERC2P3-204ENST00000426501 5995 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
KRTAP9-4Q9BYQ2 PRKAB2-201ENST00000254101 5417 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
KRTAP9-4Q9BYQ2 EXOC5-202ENST00000413566 8513 ntTSL 5 BASIC3.18□□□□□ -1.9
KRTAP9-4Q9BYQ2 CES2-202ENST00000417689 3868 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
KRTAP9-4Q9BYQ2 PAMR1-209ENST00000622144 2785 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
KRTAP9-4Q9BYQ2 CAMTA2-202ENST00000361571 4777 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
KRTAP9-4Q9BYQ2 OR5M2P-202ENST00000641241 4242 ntBASIC3.17□□□□□ -1.9
KRTAP9-4Q9BYQ2 AL135999.1-201ENST00000555968 3243 ntTSL 2 BASIC3.17□□□□□ -1.9
KRTAP9-4Q9BYQ2 IL17REL-202ENST00000389983 3668 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
KRTAP9-4Q9BYQ2 OTOF-204ENST00000402415 5108 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
KRTAP9-4Q9BYQ2 SPATA2-202ENST00000422556 4138 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
KRTAP9-4Q9BYQ2 DCANP1-201ENST00000503143 3135 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
KRTAP9-4Q9BYQ2 PROS1-202ENST00000394236 3560 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
KRTAP9-4Q9BYQ2 CACNA1C-209ENST00000399603 7377 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
KRTAP9-4Q9BYQ2 LINC01001-201ENST00000526704 2553 ntTSL 5 BASIC3.17□□□□□ -1.9
KRTAP9-4Q9BYQ2 PKD2L1-201ENST00000318222 3043 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
KRTAP9-4Q9BYQ2 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
KRTAP9-4Q9BYQ2 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
KRTAP9-4Q9BYQ2 CNR1-204ENST00000428600 1550 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
KRTAP9-4Q9BYQ2 EXOC7-220ENST00000607838 3353 ntTSL 5 BASIC3.17□□□□□ -1.9
KRTAP9-4Q9BYQ2 DAPK1-213ENST00000491893 4186 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
KRTAP9-4Q9BYQ2 ZNF572-201ENST00000319286 3275 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
KRTAP9-4Q9BYQ2 RAP1GAP-206ENST00000374765 3271 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
KRTAP9-4Q9BYQ2 SCN5A-207ENST00000449557 5898 ntTSL 5 BASIC3.17□□□□□ -1.9
KRTAP9-4Q9BYQ2 NFYC-203ENST00000372652 2363 ntTSL 2 BASIC3.17□□□□□ -1.9
KRTAP9-4Q9BYQ2 LINC01721-201ENST00000457274 2376 ntTSL 2 BASIC3.17□□□□□ -1.9
KRTAP9-4Q9BYQ2 ICK-202ENST00000356971 6227 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
KRTAP9-4Q9BYQ2 LYPD6-201ENST00000334166 4071 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
KRTAP9-4Q9BYQ2 ZNF691-203ENST00000372504 1935 ntTSL 5 BASIC3.17□□□□□ -1.9
KRTAP9-4Q9BYQ2 PTOV1-AS1-202ENST00000600742 3181 ntTSL 2 BASIC3.17□□□□□ -1.9
KRTAP9-4Q9BYQ2 WISP3-204ENST00000368666 2700 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
KRTAP9-4Q9BYQ2 SUSD4-207ENST00000484758 2736 ntTSL 2 BASIC3.17□□□□□ -1.9
KRTAP9-4Q9BYQ2 MIS18BP1-201ENST00000310806 4777 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
KRTAP9-4Q9BYQ2 GBA-202ENST00000368373 2276 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
KRTAP9-4Q9BYQ2 TBL1X-203ENST00000407597 5596 ntTSL 2 BASIC3.17□□□□□ -1.9
KRTAP9-4Q9BYQ2 BMPR1B-208ENST00000515059 5567 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
KRTAP9-4Q9BYQ2 ATP6V0A4-203ENST00000393054 3090 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
KRTAP9-4Q9BYQ2 LHFPL3-AS2-202ENST00000631061 1832 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
KRTAP9-4Q9BYQ2 EPHB6-202ENST00000422643 3436 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
KRTAP9-4Q9BYQ2 PUM1-202ENST00000373741 4242 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
KRTAP9-4Q9BYQ2 SHPRH-201ENST00000275233 6649 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
KRTAP9-4Q9BYQ2 ICE2-213ENST00000561114 3796 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
KRTAP9-4Q9BYQ2 PPFIBP2-216ENST00000530181 2965 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
KRTAP9-4Q9BYQ2 KIF9-201ENST00000265529 3311 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
KRTAP9-4Q9BYQ2 PARD3B-201ENST00000349953 3315 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
KRTAP9-4Q9BYQ2 CMKLR1-201ENST00000312143 5283 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
KRTAP9-4Q9BYQ2 DLEC1-201ENST00000308059 6426 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
KRTAP9-4Q9BYQ2 RPL13-201ENST00000311528 4498 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
KRTAP9-4Q9BYQ2 RNF165-201ENST00000269439 7596 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
KRTAP9-4Q9BYQ2 AC008764.9-201ENST00000624284 2505 ntBASIC3.17□□□□□ -1.9
KRTAP9-4Q9BYQ2 AC087741.1-201ENST00000570309 4399 ntBASIC3.17□□□□□ -1.9
KRTAP9-4Q9BYQ2 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC3.17□□□□□ -1.9
KRTAP9-4Q9BYQ2 ITGAM-201ENST00000287497 3595 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
KRTAP9-4Q9BYQ2 IDH1-203ENST00000415913 2441 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
KRTAP9-4Q9BYQ2 TRAPPC9-202ENST00000438773 4297 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
KRTAP9-4Q9BYQ2 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
KRTAP9-4Q9BYQ2 SF1-204ENST00000377390 3470 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
KRTAP9-4Q9BYQ2 ALS2CL-203ENST00000415953 3471 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
KRTAP9-4Q9BYQ2 MDP1-201ENST00000288087 730 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
KRTAP9-4Q9BYQ2 C22orf15-201ENST00000305199 681 ntAPPRIS ALT2 TSL 3 BASIC3.17□□□□□ -1.9
KRTAP9-4Q9BYQ2 SLPI-201ENST00000338380 596 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
KRTAP9-4Q9BYQ2 SERF2-202ENST00000339624 506 ntTSL 2 BASIC3.17□□□□□ -1.9
KRTAP9-4Q9BYQ2 RNU6-1335P-201ENST00000365426 107 ntBASIC3.17□□□□□ -1.9
KRTAP9-4Q9BYQ2 SNORD77.2-201ENST00000391045 68 ntBASIC3.17□□□□□ -1.9
KRTAP9-4Q9BYQ2 AC013442.1-201ENST00000397347 228 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 188 ms