RNA–Protein interactions for RNA: ENST00000622144.4

PAMR1-209, Transcript of peptidase domain containing associated with muscle regeneration 1, humanhuman

TSL 1 (best) BASIC

Gene PAMR1, Length 2,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAMR1-209ENST00000622144 NISCHQ9Y2I1 1504 aa24.32■■□□□ 1.48
PAMR1-209ENST00000622144 SHROOM4Q9ULL8 1493 aa21.3■■□□□ 1
PAMR1-209ENST00000622144 DCAF8L2P0C7V8 631 aa20.86■□□□□ 0.93
PAMR1-209ENST00000622144 SUPT5HO00267 1087 aaKnown RBP20.82■□□□□ 0.92
PAMR1-209ENST00000622144 ZCCHC6Q5VYS8 1495 aaKnown RBP20.51■□□□□ 0.87
PAMR1-209ENST00000622144 CCDC180Q9P1Z9 1646 aa20.41■□□□□ 0.86
PAMR1-209ENST00000622144 CHIC1Q5VXU3 224 aa19.97■□□□□ 0.79
PAMR1-209ENST00000622144 MYO15BQ96JP2 1530 aa19.93■□□□□ 0.78
PAMR1-209ENST00000622144 DCAF1Q9Y4B6 1507 aa19.65■□□□□ 0.74
PAMR1-209ENST00000622144 LOC105371045A0A1W2PR82 267 aa19.64■□□□□ 0.73
PAMR1-209ENST00000622144 SCRIBQ14160 1630 aa19.6■□□□□ 0.73
PAMR1-209ENST00000622144 ABCC9O60706 1549 aa19.58■□□□□ 0.73
PAMR1-209ENST00000622144 PCGF6Q9BYE7 350 aa19.46■□□□□ 0.71
PAMR1-209ENST00000622144 EHMT2Q96KQ7 1210 aa19.44■□□□□ 0.7
PAMR1-209ENST00000622144 FAM9AQ8IZU1 332 aaPredicted RBP19.35■□□□□ 0.69
PAMR1-209ENST00000622144 RSF1Q96T23 1441 aaPredicted RBP19.35■□□□□ 0.69
PAMR1-209ENST00000622144 CECR2Q9BXF3 1484 aa19.25■□□□□ 0.67
PAMR1-209ENST00000622144 PPARGC1BQ86YN6 1023 aaKnown RBP19.18■□□□□ 0.66
PAMR1-209ENST00000622144 TRIM41Q8WV44 630 aa19.18■□□□□ 0.66
PAMR1-209ENST00000622144 RB1CC1Q8TDY2 1594 aa19.17■□□□□ 0.66
PAMR1-209ENST00000622144 HRCP23327 699 aa19.16■□□□□ 0.66
PAMR1-209ENST00000622144 MROH2BQ7Z745 1585 aa19.07■□□□□ 0.64
PAMR1-209ENST00000622144 NACADO15069 1562 aa19■□□□□ 0.63
PAMR1-209ENST00000622144 WIZO95785 1651 aa18.96■□□□□ 0.63
PAMR1-209ENST00000622144 PABPN1Q86U42 306 aaKnown RBP eCLIP18.92■□□□□ 0.62
PAMR1-209ENST00000622144 TRIM26Q12899 539 aaPredicted RBP18.81■□□□□ 0.6
PAMR1-209ENST00000622144 TTBK1Q5TCY1 1321 aaPredicted RBP18.72■□□□□ 0.59
PAMR1-209ENST00000622144 ABCC8Q09428 1581 aa18.63■□□□□ 0.57
PAMR1-209ENST00000622144 BAZ1AQ9NRL2 1556 aaPredicted RBP18.6■□□□□ 0.57
PAMR1-209ENST00000622144 UNC13AQ9UPW8 1703 aa18.58■□□□□ 0.57
PAMR1-209ENST00000622144 CCDC88BA6NC98 1476 aa18.57■□□□□ 0.56
PAMR1-209ENST00000622144 SMARCA4P51532 1647 aa18.52■□□□□ 0.56
PAMR1-209ENST00000622144 SOGA1O94964 1423 aa18.46■□□□□ 0.55
PAMR1-209ENST00000622144 TOP2AP11388 1531 aaKnown RBP18.45■□□□□ 0.54
PAMR1-209ENST00000622144 EIF4G1Q04637 1599 aaKnown RBP18.44■□□□□ 0.54
PAMR1-209ENST00000622144 SMARCA2P51531 1590 aa18.43■□□□□ 0.54
PAMR1-209ENST00000622144 RUSC2Q8N2Y8 1516 aa18.43■□□□□ 0.54
PAMR1-209ENST00000622144 BICRAQ9NZM4 1560 aa18.4■□□□□ 0.54
PAMR1-209ENST00000622144 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.4■□□□□ 0.54
PAMR1-209ENST00000622144 RANGAP1P46060 587 aaPredicted RBP18.37■□□□□ 0.53
PAMR1-209ENST00000622144 UBTFP17480 764 aaKnown RBP18.36■□□□□ 0.53
PAMR1-209ENST00000622144 CSRNP3Q8WYN3 585 aa18.26■□□□□ 0.51
PAMR1-209ENST00000622144 CEP162Q5TB80 1403 aa18.21■□□□□ 0.51
PAMR1-209ENST00000622144 CCER1Q8TC90 406 aaPredicted RBP18.19■□□□□ 0.5
PAMR1-209ENST00000622144 WRNQ14191 1432 aaPredicted RBP eCLIP18.16■□□□□ 0.5
PAMR1-209ENST00000622144 ZEB1P37275 1124 aaPredicted RBP18.15■□□□□ 0.5
PAMR1-209ENST00000622144 ATAD2BQ9ULI0 1458 aa18.14■□□□□ 0.49
PAMR1-209ENST00000622144 PELP1Q8IZL8 1130 aaKnown RBP18.13■□□□□ 0.49
PAMR1-209ENST00000622144 BAZ1BQ9UIG0 1483 aaKnown RBP18.1■□□□□ 0.49
PAMR1-209ENST00000622144 SYNJ1O43426 1573 aa18.09■□□□□ 0.49
PAMR1-209ENST00000622144 TNIKQ9UKE5 1360 aa18.06■□□□□ 0.48
PAMR1-209ENST00000622144 HNRNPUL2Q1KMD3 747 aaKnown RBP18.02■□□□□ 0.48
PAMR1-209ENST00000622144 PEG3Q9GZU2 1588 aa17.97■□□□□ 0.47
PAMR1-209ENST00000622144 SCAF1Q9H7N4 1312 aaKnown RBP17.97■□□□□ 0.47
PAMR1-209ENST00000622144 GOLGA3Q08378 1498 aa17.96■□□□□ 0.47
PAMR1-209ENST00000622144 RAPGEF2Q9Y4G8 1499 aa17.94■□□□□ 0.46
PAMR1-209ENST00000622144 EEA1Q15075 1411 aa17.9■□□□□ 0.46
PAMR1-209ENST00000622144 CLIP1P30622 1438 aa17.88■□□□□ 0.45
PAMR1-209ENST00000622144 CEP164Q9UPV0 1460 aa17.84■□□□□ 0.45
PAMR1-209ENST00000622144 APLP2Q06481 763 aa17.78■□□□□ 0.44
PAMR1-209ENST00000622144 DIEXFQ68CQ4 756 aaKnown RBP17.74■□□□□ 0.43
PAMR1-209ENST00000622144 KANK4Q5T7N3 995 aaPredicted RBP17.73■□□□□ 0.43
PAMR1-209ENST00000622144 KIF21BO75037 1637 aa17.71■□□□□ 0.43
PAMR1-209ENST00000622144 CUX1P39880 1505 aa17.71■□□□□ 0.43
PAMR1-209ENST00000622144 TOP2BQ02880 1626 aa17.7■□□□□ 0.42
PAMR1-209ENST00000622144 VPS8Q8N3P4 1428 aa17.7■□□□□ 0.42
PAMR1-209ENST00000622144 NCAPD3P42695 1498 aa17.69■□□□□ 0.42
PAMR1-209ENST00000622144 ITGAEP38570 1179 aa17.67■□□□□ 0.42
PAMR1-209ENST00000622144 NEUROD1Q13562 356 aa17.63■□□□□ 0.41
PAMR1-209ENST00000622144 P3H3Q8IVL6 736 aa17.62■□□□□ 0.41
PAMR1-209ENST00000622144 YTHDC1Q96MU7 727 aaKnown RBP17.6■□□□□ 0.41
PAMR1-209ENST00000622144 ARAP1Q96P48 1450 aa17.58■□□□□ 0.4
PAMR1-209ENST00000622144 PRXQ9BXM0 1461 aa17.58■□□□□ 0.4
PAMR1-209ENST00000622144 CFTRP13569 1480 aa17.57■□□□□ 0.4
PAMR1-209ENST00000622144 BIVM-ERCC5R4GMW8 1640 aa17.57■□□□□ 0.4
PAMR1-209ENST00000622144 HMGXB3Q12766 1538 aa17.57■□□□□ 0.4
PAMR1-209ENST00000622144 DNAJC5BQ9UF47 199 aa17.55■□□□□ 0.4
PAMR1-209ENST00000622144 ATP1B4Q9UN42 357 aaPredicted RBP17.55■□□□□ 0.4
PAMR1-209ENST00000622144 KIF27Q86VH2 1401 aa17.55■□□□□ 0.4
PAMR1-209ENST00000622144 ZNF316A6NFI3 1004 aaPredicted RBP17.55■□□□□ 0.4
PAMR1-209ENST00000622144 CUX2O14529 1486 aa17.53■□□□□ 0.4
PAMR1-209ENST00000622144 MIER1Q8N108 512 aa17.48■□□□□ 0.39
PAMR1-209ENST00000622144 ACIN1Q9UKV3 1341 aaKnown RBP17.48■□□□□ 0.39
PAMR1-209ENST00000622144 IGF1RP08069 1367 aa17.47■□□□□ 0.39
PAMR1-209ENST00000622144 CADPSQ9ULU8 1353 aa17.47■□□□□ 0.39
PAMR1-209ENST00000622144 NESP48681 1621 aa17.45■□□□□ 0.38
PAMR1-209ENST00000622144 ARHGAP35Q9NRY4 1499 aa17.44■□□□□ 0.38
PAMR1-209ENST00000622144 FGD5Q6ZNL6 1462 aa17.42■□□□□ 0.38
PAMR1-209ENST00000622144 CC2D2AQ9P2K1 1620 aa17.42■□□□□ 0.38
PAMR1-209ENST00000622144 GTF3C3Q9Y5Q9 886 aa17.42■□□□□ 0.38
PAMR1-209ENST00000622144 ERICH3Q5RHP9 1530 aa17.42■□□□□ 0.38
PAMR1-209ENST00000622144 RAD54L2Q9Y4B4 1467 aa17.41■□□□□ 0.38
PAMR1-209ENST00000622144 CARMIL1Q5VZK9 1371 aa17.4■□□□□ 0.38
PAMR1-209ENST00000622144 DHX57Q6P158 1386 aaKnown RBP17.36■□□□□ 0.37
PAMR1-209ENST00000622144 MYT1Q01538 1121 aa17.35■□□□□ 0.37
PAMR1-209ENST00000622144 FANCD2Q9BXW9 1451 aa17.33■□□□□ 0.37
PAMR1-209ENST00000622144 FAM50AQ14320 339 aaKnown RBP17.33■□□□□ 0.36
PAMR1-209ENST00000622144 CCNB3Q8WWL7 1395 aa17.28■□□□□ 0.36
PAMR1-209ENST00000622144 CENPBP07199 599 aaPredicted RBP17.28■□□□□ 0.36
PAMR1-209ENST00000622144 FHOD3Q2V2M9 1422 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms