Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 RPS27P20-201ENST00000492051 246 ntBASIC7.91□□□□□ -1.14
LRCH3Q96II8 RN7SL101P-201ENST00000496350 279 ntBASIC7.91□□□□□ -1.14
LRCH3Q96II8 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC7.91□□□□□ -1.14
LRCH3Q96II8 AC079140.5-201ENST00000507882 310 ntBASIC7.91□□□□□ -1.14
LRCH3Q96II8 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC7.91□□□□□ -1.14
LRCH3Q96II8 AC098591.2-201ENST00000510152 315 ntBASIC7.91□□□□□ -1.14
LRCH3Q96II8 RNU6-885P-201ENST00000516607 104 ntBASIC7.91□□□□□ -1.14
LRCH3Q96II8 RNA5SP135-201ENST00000517019 125 ntBASIC7.91□□□□□ -1.14
LRCH3Q96II8 ST13P6-201ENST00000522430 1102 ntBASIC7.91□□□□□ -1.14
LRCH3Q96II8 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC7.91□□□□□ -1.14
LRCH3Q96II8 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC7.91□□□□□ -1.14
LRCH3Q96II8 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC7.91□□□□□ -1.14
LRCH3Q96II8 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC7.91□□□□□ -1.14
LRCH3Q96II8 AL389895.1-201ENST00000554127 252 ntBASIC7.91□□□□□ -1.14
LRCH3Q96II8 NDUFA3P4-201ENST00000560814 250 ntBASIC7.91□□□□□ -1.14
LRCH3Q96II8 TVP23CP2-201ENST00000571473 623 ntBASIC7.91□□□□□ -1.14
LRCH3Q96II8 RN7SL230P-201ENST00000580835 303 ntBASIC7.91□□□□□ -1.14
LRCH3Q96II8 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC7.91□□□□□ -1.14
LRCH3Q96II8 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC7.91□□□□□ -1.14
LRCH3Q96II8 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
LRCH3Q96II8 AL354950.2-201ENST00000617939 290 ntBASIC7.91□□□□□ -1.14
LRCH3Q96II8 AC067931.1-201ENST00000624190 671 ntBASIC7.91□□□□□ -1.14
LRCH3Q96II8 ZHX3-211ENST00000544979 3933 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
LRCH3Q96II8 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
LRCH3Q96II8 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC7.91□□□□□ -1.14
LRCH3Q96II8 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
LRCH3Q96II8 AL359091.1-201ENST00000449048 1734 ntBASIC7.91□□□□□ -1.14
LRCH3Q96II8 MTND5P10-201ENST00000603719 1809 ntBASIC7.91□□□□□ -1.14
LRCH3Q96II8 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
LRCH3Q96II8 ZNF69-202ENST00000429654 2010 ntAPPRIS P1 TSL 2 BASIC7.91□□□□□ -1.14
LRCH3Q96II8 CYP4A11-201ENST00000310638 2530 ntAPPRIS P2 TSL 1 (best) BASIC7.91□□□□□ -1.14
LRCH3Q96II8 SEM1-215ENST00000615352 2637 ntTSL 5 BASIC7.91□□□□□ -1.14
LRCH3Q96II8 LINC00561-201ENST00000565815 2738 ntBASIC7.91□□□□□ -1.14
LRCH3Q96II8 LPAR1-202ENST00000374430 2993 ntAPPRIS P2 TSL 1 (best) BASIC7.91□□□□□ -1.14
LRCH3Q96II8 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
LRCH3Q96II8 AL590999.1-201ENST00000607675 3776 ntTSL 2 BASIC7.91□□□□□ -1.14
LRCH3Q96II8 PPARA-203ENST00000407236 9995 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
LRCH3Q96II8 GAPVD1-207ENST00000394105 5207 ntAPPRIS P3 TSL 5 BASIC7.9□□□□□ -1.14
LRCH3Q96II8 NUMB-223ENST00000556772 5172 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
LRCH3Q96II8 AC009690.2-201ENST00000570175 3148 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
LRCH3Q96II8 PIBF1-208ENST00000617689 2882 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
LRCH3Q96II8 AC022150.4-201ENST00000598322 2848 ntBASIC7.9□□□□□ -1.14
LRCH3Q96II8 AC036108.4-201ENST00000611654 2516 ntBASIC7.9□□□□□ -1.14
LRCH3Q96II8 MAPK10-319ENST00000641459 2542 ntBASIC7.9□□□□□ -1.14
LRCH3Q96II8 LINC01060-204ENST00000510832 2435 ntTSL 2 BASIC7.9□□□□□ -1.14
LRCH3Q96II8 NT5DC1-201ENST00000319550 6923 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
LRCH3Q96II8 SLC16A4-202ENST00000369781 2082 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
LRCH3Q96II8 LMO7-207ENST00000465261 5580 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
LRCH3Q96II8 CTH-202ENST00000370938 1805 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
LRCH3Q96II8 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
LRCH3Q96II8 AC008627.1-201ENST00000517511 1704 ntBASIC7.9□□□□□ -1.14
LRCH3Q96II8 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
LRCH3Q96II8 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC7.9□□□□□ -1.14
LRCH3Q96II8 YAF2-201ENST00000327791 4156 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
LRCH3Q96II8 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC7.9□□□□□ -1.14
LRCH3Q96II8 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC7.9□□□□□ -1.14
LRCH3Q96II8 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
LRCH3Q96II8 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
LRCH3Q96II8 RNA5SP308-201ENST00000362532 115 ntBASIC7.9□□□□□ -1.14
LRCH3Q96II8 RN7SKP237-201ENST00000364663 301 ntBASIC7.9□□□□□ -1.14
LRCH3Q96II8 RNA5SP85-201ENST00000365378 119 ntBASIC7.9□□□□□ -1.14
LRCH3Q96II8 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC7.9□□□□□ -1.14
LRCH3Q96II8 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC7.9□□□□□ -1.14
LRCH3Q96II8 RNU6-33P-201ENST00000384793 107 ntBASIC7.9□□□□□ -1.14
LRCH3Q96II8 IGLV3-12-201ENST00000390313 356 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
LRCH3Q96II8 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
LRCH3Q96II8 RPL23AP32-201ENST00000395315 459 ntBASIC7.9□□□□□ -1.14
LRCH3Q96II8 SMIM2-201ENST00000400419 822 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
LRCH3Q96II8 AL591416.1-201ENST00000404015 867 ntBASIC7.9□□□□□ -1.14
LRCH3Q96II8 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC7.9□□□□□ -1.14
LRCH3Q96II8 AL691515.2-201ENST00000414765 466 ntTSL 3 BASIC7.9□□□□□ -1.14
LRCH3Q96II8 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC7.9□□□□□ -1.14
LRCH3Q96II8 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC7.9□□□□□ -1.14
LRCH3Q96II8 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC7.9□□□□□ -1.14
LRCH3Q96II8 AL392103.1-201ENST00000447000 198 ntBASIC7.9□□□□□ -1.14
LRCH3Q96II8 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC7.9□□□□□ -1.14
LRCH3Q96II8 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC7.9□□□□□ -1.14
LRCH3Q96II8 AC112484.3-201ENST00000505910 329 ntBASIC7.9□□□□□ -1.14
LRCH3Q96II8 HMGB1P19-201ENST00000517578 577 ntBASIC7.9□□□□□ -1.14
LRCH3Q96II8 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC7.9□□□□□ -1.14
LRCH3Q96II8 AC079313.2-201ENST00000550474 564 ntTSL 4 BASIC7.9□□□□□ -1.14
LRCH3Q96II8 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC7.9□□□□□ -1.14
LRCH3Q96II8 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC7.9□□□□□ -1.14
LRCH3Q96II8 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC7.9□□□□□ -1.14
LRCH3Q96II8 AC096861.1-201ENST00000616652 240 ntBASIC7.9□□□□□ -1.14
LRCH3Q96II8 PACRG-211ENST00000621363 360 ntTSL 5 BASIC7.9□□□□□ -1.14
LRCH3Q96II8 AC087894.3-201ENST00000623682 349 ntBASIC7.9□□□□□ -1.14
LRCH3Q96II8 AC011471.4-201ENST00000638271 216 ntBASIC7.9□□□□□ -1.14
LRCH3Q96II8 FNDC3B-203ENST00000416957 3684 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
LRCH3Q96II8 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
LRCH3Q96II8 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
LRCH3Q96II8 ZNF235-201ENST00000291182 3188 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
LRCH3Q96II8 ZNF544-206ENST00000596652 2818 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.15
LRCH3Q96II8 ZNF544-217ENST00000600220 2837 ntAPPRIS ALT2 TSL 3 BASIC7.9□□□□□ -1.15
LRCH3Q96II8 NF1P2-201ENST00000556855 2505 ntBASIC7.9□□□□□ -1.15
LRCH3Q96II8 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
LRCH3Q96II8 NME8-201ENST00000199447 2312 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
LRCH3Q96II8 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
LRCH3Q96II8 SLC7A2-203ENST00000470360 7638 ntAPPRIS P3 TSL 5 BASIC7.9□□□□□ -1.15
LRCH3Q96II8 RPL7L1-208ENST00000493763 4476 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms