RNA–Protein interactions for RNA: ENST00000516607.1

RNU6-885P-201, Transcript of RNA, U6 small nuclear 885, pseudogene, humanhuman

BASIC

Gene RNU6-885P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-885P-201ENST00000516607 CHIC1Q5VXU3 224 aa17.74■□□□□ 0.43
RNU6-885P-201ENST00000516607 AEBP2Q6ZN18 517 aaPredicted RBP17.65■□□□□ 0.42
RNU6-885P-201ENST00000516607 PHF23Q9BUL5 403 aaPredicted RBP15.58■□□□□ 0.08
RNU6-885P-201ENST00000516607 SENP3Q9H4L4 574 aaPredicted RBP15.04■□□□□ -0
RNU6-885P-201ENST00000516607 PLPPR3Q6T4P5 718 aa14.65□□□□□ -0.06
RNU6-885P-201ENST00000516607 FOXD1Q16676 465 aa13.81□□□□□ -0.2
RNU6-885P-201ENST00000516607 ADRA2BP18089 450 aa13.64□□□□□ -0.23
RNU6-885P-201ENST00000516607 PPP6R1Q9UPN7 881 aa13.59□□□□□ -0.23
RNU6-885P-201ENST00000516607 PIAS4Q8N2W9 510 aaPredicted RBP13.2□□□□□ -0.3
RNU6-885P-201ENST00000516607 KCNA4P22459 653 aa13.09□□□□□ -0.31
RNU6-885P-201ENST00000516607 PPP4R3CPQ6ZMV5 832 aa12.92□□□□□ -0.34
RNU6-885P-201ENST00000516607 NCBP3Q53F19 620 aaKnown RBP12.8□□□□□ -0.36
RNU6-885P-201ENST00000516607 EHMT2Q96KQ7 1210 aa12.72□□□□□ -0.37
RNU6-885P-201ENST00000516607 MSH5O43196 834 aa12.67□□□□□ -0.38
RNU6-885P-201ENST00000516607 SCAF1Q9H7N4 1312 aaKnown RBP12.61□□□□□ -0.39
RNU6-885P-201ENST00000516607 SLC4A1APQ9BWU0 796 aaKnown RBP12.6□□□□□ -0.39
RNU6-885P-201ENST00000516607 NPM3O75607 178 aaKnown RBP12.5□□□□□ -0.41
RNU6-885P-201ENST00000516607 CNKSR2Q8WXI2 1034 aa12.5□□□□□ -0.41
RNU6-885P-201ENST00000516607 CSRNP3Q8WYN3 585 aa12.32□□□□□ -0.44
RNU6-885P-201ENST00000516607 MAPK8IP2Q13387 824 aaPredicted RBP12.21□□□□□ -0.45
RNU6-885P-201ENST00000516607 RNF216Q9NWF9 866 aaPredicted RBP12.14□□□□□ -0.47
RNU6-885P-201ENST00000516607 DNAJC5BQ9UF47 199 aa12.11□□□□□ -0.47
RNU6-885P-201ENST00000516607 DMRT2Q9Y5R5 561 aa12.04□□□□□ -0.48
RNU6-885P-201ENST00000516607 ZBTB22O15209 634 aa12.01□□□□□ -0.49
RNU6-885P-201ENST00000516607 FOXD4L1Q9NU39 408 aa11.98□□□□□ -0.49
RNU6-885P-201ENST00000516607 HOXD11P31277 338 aaPredicted RBP11.95□□□□□ -0.5
RNU6-885P-201ENST00000516607 SLC4A2P04920 1241 aa11.67□□□□□ -0.54
RNU6-885P-201ENST00000516607 MYCNP04198 464 aaPredicted RBP11.61□□□□□ -0.55
RNU6-885P-201ENST00000516607 ATXN8OSP0DMR3 200 aa11.55□□□□□ -0.56
RNU6-885P-201ENST00000516607 DCAF8L1A6NGE4 600 aa11.53□□□□□ -0.56
RNU6-885P-201ENST00000516607 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.44□□□□□ -0.58
RNU6-885P-201ENST00000516607 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.37□□□□□ -0.59
RNU6-885P-201ENST00000516607 HNRNPUL2Q1KMD3 747 aaKnown RBP11.37□□□□□ -0.59
RNU6-885P-201ENST00000516607 SAMD1Q6SPF0 538 aaPredicted RBP11.33□□□□□ -0.6
RNU6-885P-201ENST00000516607 U3KPZ7 1027 aaPredicted RBP11.24□□□□□ -0.61
RNU6-885P-201ENST00000516607 APLP2Q06481 763 aa11.18□□□□□ -0.62
RNU6-885P-201ENST00000516607 FKBP8Q14318 412 aa11.17□□□□□ -0.62
RNU6-885P-201ENST00000516607 ATF5Q9Y2D1 282 aaPredicted RBP11.15□□□□□ -0.62
RNU6-885P-201ENST00000516607 ZNF219Q9P2Y4 722 aaPredicted RBP11.01□□□□□ -0.65
RNU6-885P-201ENST00000516607 AMER1Q5JTC6 1135 aaPredicted RBP11□□□□□ -0.65
RNU6-885P-201ENST00000516607 RTN4Q9NQC3 1192 aaKnown RBP10.9□□□□□ -0.66
RNU6-885P-201ENST00000516607 RNF39Q9H2S5 420 aa10.84□□□□□ -0.67
RNU6-885P-201ENST00000516607 TRHP20396 242 aaPredicted RBP10.82□□□□□ -0.68
RNU6-885P-201ENST00000516607 FBLN2P98095 1184 aa10.81□□□□□ -0.68
RNU6-885P-201ENST00000516607 CAPN15O75808 1086 aa10.79□□□□□ -0.68
RNU6-885P-201ENST00000516607 C1QBPQ07021 282 aaKnown RBP10.78□□□□□ -0.68
RNU6-885P-201ENST00000516607 SPINK5Q9NQ38 1064 aaPredicted RBP10.78□□□□□ -0.68
RNU6-885P-201ENST00000516607 SPDYE4A6NLX3 237 aa10.75□□□□□ -0.69
RNU6-885P-201ENST00000516607 POLA2Q14181 598 aa10.73□□□□□ -0.69
RNU6-885P-201ENST00000516607 FBXO3Q9UK99 471 aa10.73□□□□□ -0.69
RNU6-885P-201ENST00000516607 MKRN4PQ13434 485 aaPredicted RBP10.71□□□□□ -0.69
RNU6-885P-201ENST00000516607 POTEDQ86YR6 584 aa10.69□□□□□ -0.7
RNU6-885P-201ENST00000516607 ZBTB12Q9Y330 459 aaPredicted RBP10.69□□□□□ -0.7
RNU6-885P-201ENST00000516607 SLC24A1O60721 1099 aa10.62□□□□□ -0.71
RNU6-885P-201ENST00000516607 PROM2Q8N271 834 aa10.6□□□□□ -0.71
RNU6-885P-201ENST00000516607 ABCB7O75027 752 aa10.58□□□□□ -0.72
RNU6-885P-201ENST00000516607 VASPP50552 380 aaPredicted RBP10.51□□□□□ -0.73
RNU6-885P-201ENST00000516607 DSG3P32926 999 aa10.46□□□□□ -0.73
RNU6-885P-201ENST00000516607 ZNF692Q9BU19 519 aaPredicted RBP10.4□□□□□ -0.74
RNU6-885P-201ENST00000516607 SPDYE2BA6NHP3 402 aa10.39□□□□□ -0.75
RNU6-885P-201ENST00000516607 SPDYE6P0CI01 402 aa10.39□□□□□ -0.75
RNU6-885P-201ENST00000516607 SPDYE2Q495Y8 402 aa10.39□□□□□ -0.75
RNU6-885P-201ENST00000516607 IFNLR1Q8IU57 520 aaPredicted RBP10.35□□□□□ -0.75
RNU6-885P-201ENST00000516607 OSCARQ8IYS5 282 aa10.35□□□□□ -0.75
RNU6-885P-201ENST00000516607 STAG3Q9UJ98 1225 aa10.32□□□□□ -0.76
RNU6-885P-201ENST00000516607 SSUH2Q9Y2M2 353 aa10.31□□□□□ -0.76
RNU6-885P-201ENST00000516607 CACNB1Q02641 598 aaPredicted RBP10.28□□□□□ -0.76
RNU6-885P-201ENST00000516607 PABPN1Q86U42 306 aaKnown RBP eCLIP10.26□□□□□ -0.77
RNU6-885P-201ENST00000516607 KLHL34Q8N239 644 aa10.26□□□□□ -0.77
RNU6-885P-201ENST00000516607 PLCD3Q8N3E9 789 aa10.23□□□□□ -0.77
RNU6-885P-201ENST00000516607 SPOCK2Q92563 424 aa10.22□□□□□ -0.77
RNU6-885P-201ENST00000516607 DCAF8L2P0C7V8 631 aa10.21□□□□□ -0.77
RNU6-885P-201ENST00000516607 PLEKHG5O94827 1062 aa10.18□□□□□ -0.78
RNU6-885P-201ENST00000516607 PKD2Q13563 968 aa10.16□□□□□ -0.78
RNU6-885P-201ENST00000516607 MIER1Q8N108 512 aa10.16□□□□□ -0.78
RNU6-885P-201ENST00000516607 ZBTB47Q9UFB7 747 aaPredicted RBP10.13□□□□□ -0.79
RNU6-885P-201ENST00000516607 PLCB2Q00722 1185 aa10.12□□□□□ -0.79
RNU6-885P-201ENST00000516607 ECM2O94769 699 aaPredicted RBP10.09□□□□□ -0.79
RNU6-885P-201ENST00000516607 RBM42Q9BTD8 480 aaKnown RBP10.05□□□□□ -0.8
RNU6-885P-201ENST00000516607 SPDYE1Q8NFV5 336 aaPredicted RBP9.99□□□□□ -0.81
RNU6-885P-201ENST00000516607 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.99□□□□□ -0.81
RNU6-885P-201ENST00000516607 CIZ1Q9ULV3 898 aaPredicted RBP9.99□□□□□ -0.81
RNU6-885P-201ENST00000516607 HAP1P54257 671 aaPredicted RBP9.98□□□□□ -0.81
RNU6-885P-201ENST00000516607 AKT1S1Q96B36 256 aa9.98□□□□□ -0.81
RNU6-885P-201ENST00000516607 TRIM41Q8WV44 630 aa9.97□□□□□ -0.81
RNU6-885P-201ENST00000516607 BBXQ8WY36 941 aaPredicted RBP9.95□□□□□ -0.82
RNU6-885P-201ENST00000516607 RGL2O15211 777 aa9.92□□□□□ -0.82
RNU6-885P-201ENST00000516607 GSE1Q14687 1217 aa9.9□□□□□ -0.82
RNU6-885P-201ENST00000516607 CLEC11AQ9Y240 323 aa9.89□□□□□ -0.83
RNU6-885P-201ENST00000516607 PRR29P0C7W0 189 aa9.88□□□□□ -0.83
RNU6-885P-201ENST00000516607 VSIG10Q8N0Z9 540 aa9.85□□□□□ -0.83
RNU6-885P-201ENST00000516607 NPM1P06748 294 aaKnown RBP eCLIP9.84□□□□□ -0.83
RNU6-885P-201ENST00000516607 PAXIP1Q6ZW49 1069 aaPredicted RBP9.84□□□□□ -0.83
RNU6-885P-201ENST00000516607 REM2Q8IYK8 340 aaPredicted RBP9.84□□□□□ -0.83
RNU6-885P-201ENST00000516607 CHGAP10645 457 aaKnown RBP9.82□□□□□ -0.84
RNU6-885P-201ENST00000516607 CFAP44Q96MT7 982 aa9.82□□□□□ -0.84
RNU6-885P-201ENST00000516607 TAOK2Q9UL54 1235 aa9.82□□□□□ -0.84
RNU6-885P-201ENST00000516607 NUBP1P53384 320 aa9.81□□□□□ -0.84
RNU6-885P-201ENST00000516607 FAM212AQ96EL1 285 aa9.81□□□□□ -0.84
RNU6-885P-201ENST00000516607 DCAF8Q5TAQ9 597 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms