RNA–Protein interactions for RNA: ENST00000538025.1

AC140847.1-201, humanhuman

TSL 4 BASIC

Gene AC140847.1, Length 534 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC140847.1-201ENST00000538025 AEBP2Q6ZN18 517 aaPredicted RBP20.05■□□□□ 0.8
AC140847.1-201ENST00000538025 CHIC1Q5VXU3 224 aa19.02■□□□□ 0.64
AC140847.1-201ENST00000538025 SENP3Q9H4L4 574 aaPredicted RBP17.18■□□□□ 0.34
AC140847.1-201ENST00000538025 PHF23Q9BUL5 403 aaPredicted RBP16.89■□□□□ 0.29
AC140847.1-201ENST00000538025 FOXD1Q16676 465 aa15.97■□□□□ 0.15
AC140847.1-201ENST00000538025 PLPPR3Q6T4P5 718 aa15.18■□□□□ 0.02
AC140847.1-201ENST00000538025 MSH5O43196 834 aa15.04■□□□□ -0
AC140847.1-201ENST00000538025 PIAS4Q8N2W9 510 aaPredicted RBP14.91□□□□□ -0.02
AC140847.1-201ENST00000538025 PPP6R1Q9UPN7 881 aa14.84□□□□□ -0.03
AC140847.1-201ENST00000538025 ADRA2BP18089 450 aa14.78□□□□□ -0.04
AC140847.1-201ENST00000538025 POTEDQ86YR6 584 aa14.74□□□□□ -0.05
AC140847.1-201ENST00000538025 SCAF1Q9H7N4 1312 aaKnown RBP13.62□□□□□ -0.23
AC140847.1-201ENST00000538025 DMRT2Q9Y5R5 561 aa13.61□□□□□ -0.23
AC140847.1-201ENST00000538025 MAPK8IP2Q13387 824 aaPredicted RBP13.57□□□□□ -0.24
AC140847.1-201ENST00000538025 PPP4R3CPQ6ZMV5 832 aa13.26□□□□□ -0.29
AC140847.1-201ENST00000538025 HOXD11P31277 338 aaPredicted RBP13.1□□□□□ -0.31
AC140847.1-201ENST00000538025 CNKSR2Q8WXI2 1034 aa13.06□□□□□ -0.32
AC140847.1-201ENST00000538025 RNF216Q9NWF9 866 aaPredicted RBP12.97□□□□□ -0.33
AC140847.1-201ENST00000538025 DCAF8L1A6NGE4 600 aa12.95□□□□□ -0.34
AC140847.1-201ENST00000538025 CACNB1Q02641 598 aaPredicted RBP12.88□□□□□ -0.35
AC140847.1-201ENST00000538025 RNF39Q9H2S5 420 aa12.8□□□□□ -0.36
AC140847.1-201ENST00000538025 NCBP3Q53F19 620 aaKnown RBP12.77□□□□□ -0.37
AC140847.1-201ENST00000538025 DNAJC5BQ9UF47 199 aa12.74□□□□□ -0.37
AC140847.1-201ENST00000538025 C1QBPQ07021 282 aaKnown RBP12.63□□□□□ -0.39
AC140847.1-201ENST00000538025 NPM3O75607 178 aaKnown RBP12.55□□□□□ -0.4
AC140847.1-201ENST00000538025 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.41□□□□□ -0.42
AC140847.1-201ENST00000538025 KCNA4P22459 653 aa12.21□□□□□ -0.45
AC140847.1-201ENST00000538025 U3KPZ7 1027 aaPredicted RBP12.17□□□□□ -0.46
AC140847.1-201ENST00000538025 SLC4A2P04920 1241 aa12□□□□□ -0.49
AC140847.1-201ENST00000538025 SPINK5Q9NQ38 1064 aaPredicted RBP11.97□□□□□ -0.49
AC140847.1-201ENST00000538025 CAPN15O75808 1086 aa11.96□□□□□ -0.49
AC140847.1-201ENST00000538025 DSG3P32926 999 aa11.94□□□□□ -0.5
AC140847.1-201ENST00000538025 APLP2Q06481 763 aa11.9□□□□□ -0.5
AC140847.1-201ENST00000538025 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.85□□□□□ -0.51
AC140847.1-201ENST00000538025 HNRNPUL2Q1KMD3 747 aaKnown RBP11.85□□□□□ -0.51
AC140847.1-201ENST00000538025 ZNF219Q9P2Y4 722 aaPredicted RBP11.8□□□□□ -0.52
AC140847.1-201ENST00000538025 SAMD1Q6SPF0 538 aaPredicted RBP11.77□□□□□ -0.53
AC140847.1-201ENST00000538025 TRHP20396 242 aaPredicted RBP11.74□□□□□ -0.53
AC140847.1-201ENST00000538025 ABCB7O75027 752 aa11.65□□□□□ -0.54
AC140847.1-201ENST00000538025 MYCNP04198 464 aaPredicted RBP11.65□□□□□ -0.54
AC140847.1-201ENST00000538025 POTEHQ6S545 545 aa11.54□□□□□ -0.56
AC140847.1-201ENST00000538025 SLC4A1APQ9BWU0 796 aaKnown RBP11.53□□□□□ -0.56
AC140847.1-201ENST00000538025 FOXD4L1Q9NU39 408 aa11.48□□□□□ -0.57
AC140847.1-201ENST00000538025 RBM42Q9BTD8 480 aaKnown RBP11.46□□□□□ -0.57
AC140847.1-201ENST00000538025 POLA2Q14181 598 aa11.42□□□□□ -0.58
AC140847.1-201ENST00000538025 ATF5Q9Y2D1 282 aaPredicted RBP11.3□□□□□ -0.6
AC140847.1-201ENST00000538025 ZBTB12Q9Y330 459 aaPredicted RBP11.28□□□□□ -0.6
AC140847.1-201ENST00000538025 ZBTB22O15209 634 aa11.23□□□□□ -0.61
AC140847.1-201ENST00000538025 CHRDL2Q6WN34 429 aa11.18□□□□□ -0.62
AC140847.1-201ENST00000538025 ATXN8OSP0DMR3 200 aa11.17□□□□□ -0.62
AC140847.1-201ENST00000538025 AKT1S1Q96B36 256 aa11.15□□□□□ -0.62
AC140847.1-201ENST00000538025 OSCARQ8IYS5 282 aa11.07□□□□□ -0.64
AC140847.1-201ENST00000538025 REM2Q8IYK8 340 aaPredicted RBP11.01□□□□□ -0.65
AC140847.1-201ENST00000538025 FBLN2P98095 1184 aa10.93□□□□□ -0.66
AC140847.1-201ENST00000538025 SPDYE2BA6NHP3 402 aa10.9□□□□□ -0.66
AC140847.1-201ENST00000538025 SPDYE6P0CI01 402 aa10.9□□□□□ -0.66
AC140847.1-201ENST00000538025 SPDYE2Q495Y8 402 aa10.9□□□□□ -0.66
AC140847.1-201ENST00000538025 PITPNM1O00562 1244 aa10.89□□□□□ -0.67
AC140847.1-201ENST00000538025 PIP4P2Q8N4L2 257 aa10.89□□□□□ -0.67
AC140847.1-201ENST00000538025 FXR2P51116 673 aaKnown RBP eCLIP10.84□□□□□ -0.67
AC140847.1-201ENST00000538025 MKRN4PQ13434 485 aaPredicted RBP10.81□□□□□ -0.68
AC140847.1-201ENST00000538025 SP7Q8TDD2 431 aaPredicted RBP10.8□□□□□ -0.68
AC140847.1-201ENST00000538025 SSUH2Q9Y2M2 353 aa10.75□□□□□ -0.69
AC140847.1-201ENST00000538025 SPDYE1Q8NFV5 336 aaPredicted RBP10.72□□□□□ -0.69
AC140847.1-201ENST00000538025 ZNF692Q9BU19 519 aaPredicted RBP10.7□□□□□ -0.7
AC140847.1-201ENST00000538025 HAX1O00165 279 aa10.68□□□□□ -0.7
AC140847.1-201ENST00000538025 CSRNP3Q8WYN3 585 aa10.65□□□□□ -0.7
AC140847.1-201ENST00000538025 CLEC11AQ9Y240 323 aa10.62□□□□□ -0.71
AC140847.1-201ENST00000538025 PRKAR2AP13861 404 aaKnown RBP10.6□□□□□ -0.71
AC140847.1-201ENST00000538025 PABPN1Q86U42 306 aaKnown RBP eCLIP10.54□□□□□ -0.72
AC140847.1-201ENST00000538025 EVX2Q03828 476 aa10.52□□□□□ -0.73
AC140847.1-201ENST00000538025 C19orf67A6NJJ6 358 aa10.5□□□□□ -0.73
AC140847.1-201ENST00000538025 PRR29P0C7W0 189 aa10.47□□□□□ -0.73
AC140847.1-201ENST00000538025 EHMT2Q96KQ7 1210 aa10.45□□□□□ -0.74
AC140847.1-201ENST00000538025 CHADLQ6NUI6 762 aa10.42□□□□□ -0.74
AC140847.1-201ENST00000538025 GABBR2O75899 941 aa10.32□□□□□ -0.76
AC140847.1-201ENST00000538025 FARP1Q9Y4F1 1045 aaPredicted RBP10.32□□□□□ -0.76
AC140847.1-201ENST00000538025 STAG3Q9UJ98 1225 aa10.3□□□□□ -0.76
AC140847.1-201ENST00000538025 SPDYE4A6NLX3 237 aa10.27□□□□□ -0.77
AC140847.1-201ENST00000538025 CD44P16070 742 aaKnown RBP10.27□□□□□ -0.77
AC140847.1-201ENST00000538025 CLCN6P51797 869 aa10.25□□□□□ -0.77
AC140847.1-201ENST00000538025 CREBZFQ9NS37 354 aa10.21□□□□□ -0.77
AC140847.1-201ENST00000538025 ZNF579Q8NAF0 562 aaKnown RBP10.15□□□□□ -0.78
AC140847.1-201ENST00000538025 LHX8Q68G74 356 aa10.1□□□□□ -0.79
AC140847.1-201ENST00000538025 ZRANB1Q9UGI0 708 aa10.1□□□□□ -0.79
AC140847.1-201ENST00000538025 POTEIP0CG38 1075 aa10.09□□□□□ -0.79
AC140847.1-201ENST00000538025 PROM2Q8N271 834 aa10.08□□□□□ -0.8
AC140847.1-201ENST00000538025 NPM1P06748 294 aaKnown RBP eCLIP10.05□□□□□ -0.8
AC140847.1-201ENST00000538025 PAK3O75914 559 aaPredicted RBP10.04□□□□□ -0.8
AC140847.1-201ENST00000538025 MNX1P50219 401 aaPredicted RBP10.04□□□□□ -0.8
AC140847.1-201ENST00000538025 DCBLD2Q96PD2 775 aa10.03□□□□□ -0.8
AC140847.1-201ENST00000538025 GALR2O43603 387 aaPredicted RBP9.97□□□□□ -0.81
AC140847.1-201ENST00000538025 PHF12Q96QT6 1004 aa9.94□□□□□ -0.82
AC140847.1-201ENST00000538025 PLEKHG5O94827 1062 aa9.83□□□□□ -0.84
AC140847.1-201ENST00000538025 MS4A3Q96HJ5 214 aa9.83□□□□□ -0.84
AC140847.1-201ENST00000538025 ASTLQ6HA08 431 aaPredicted RBP9.81□□□□□ -0.84
AC140847.1-201ENST00000538025 CCDC61Q9Y6R9 512 aa9.81□□□□□ -0.84
AC140847.1-201ENST00000538025 TSPYL2Q9H2G4 693 aaPredicted RBP9.79□□□□□ -0.84
AC140847.1-201ENST00000538025 PELP1Q8IZL8 1130 aaKnown RBP9.77□□□□□ -0.85
AC140847.1-201ENST00000538025 MIER1Q8N108 512 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms