Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CYP46A1Q9Y6A2 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CYP46A1Q9Y6A2 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CYP46A1Q9Y6A2 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
CYP46A1Q9Y6A2 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
CYP46A1Q9Y6A2 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CYP46A1Q9Y6A2 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CYP46A1Q9Y6A2 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CYP46A1Q9Y6A2 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC23.12■■□□□ 1.29
CYP46A1Q9Y6A2 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
CYP46A1Q9Y6A2 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
CYP46A1Q9Y6A2 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
CYP46A1Q9Y6A2 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
CYP46A1Q9Y6A2 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CYP46A1Q9Y6A2 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CYP46A1Q9Y6A2 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC23.12■■□□□ 1.29
CYP46A1Q9Y6A2 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC23.12■■□□□ 1.29
CYP46A1Q9Y6A2 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC23.12■■□□□ 1.29
CYP46A1Q9Y6A2 PNN-205ENST00000556530 601 ntTSL 2 BASIC23.12■■□□□ 1.29
CYP46A1Q9Y6A2 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
CYP46A1Q9Y6A2 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
CYP46A1Q9Y6A2 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC23.12■■□□□ 1.29
CYP46A1Q9Y6A2 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
CYP46A1Q9Y6A2 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC23.12■■□□□ 1.29
CYP46A1Q9Y6A2 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CYP46A1Q9Y6A2 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CYP46A1Q9Y6A2 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC23.12■■□□□ 1.29
CYP46A1Q9Y6A2 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC23.11■■□□□ 1.29
CYP46A1Q9Y6A2 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
CYP46A1Q9Y6A2 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CYP46A1Q9Y6A2 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC23.11■■□□□ 1.29
CYP46A1Q9Y6A2 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CYP46A1Q9Y6A2 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CYP46A1Q9Y6A2 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CYP46A1Q9Y6A2 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC23.11■■□□□ 1.29
CYP46A1Q9Y6A2 YBX1P10-201ENST00000444752 975 ntBASIC23.11■■□□□ 1.29
CYP46A1Q9Y6A2 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CYP46A1Q9Y6A2 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC23.11■■□□□ 1.29
CYP46A1Q9Y6A2 KLF2-202ENST00000592003 564 ntTSL 3 BASIC23.11■■□□□ 1.29
CYP46A1Q9Y6A2 AC008687.6-201ENST00000596318 630 ntBASIC23.11■■□□□ 1.29
CYP46A1Q9Y6A2 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
CYP46A1Q9Y6A2 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC23.11■■□□□ 1.29
CYP46A1Q9Y6A2 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
CYP46A1Q9Y6A2 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CYP46A1Q9Y6A2 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CYP46A1Q9Y6A2 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CYP46A1Q9Y6A2 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CYP46A1Q9Y6A2 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CYP46A1Q9Y6A2 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC23.1■■□□□ 1.29
CYP46A1Q9Y6A2 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CYP46A1Q9Y6A2 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC23.1■■□□□ 1.29
CYP46A1Q9Y6A2 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
CYP46A1Q9Y6A2 AL355802.2-201ENST00000402069 882 ntBASIC23.1■■□□□ 1.29
CYP46A1Q9Y6A2 HLA-L-209ENST00000420110 1011 ntBASIC23.1■■□□□ 1.29
CYP46A1Q9Y6A2 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
CYP46A1Q9Y6A2 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CYP46A1Q9Y6A2 AL121829.2-201ENST00000620908 328 ntBASIC23.1■■□□□ 1.29
CYP46A1Q9Y6A2 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
CYP46A1Q9Y6A2 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CYP46A1Q9Y6A2 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CYP46A1Q9Y6A2 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
CYP46A1Q9Y6A2 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CYP46A1Q9Y6A2 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC23.1■■□□□ 1.29
CYP46A1Q9Y6A2 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC23.1■■□□□ 1.29
CYP46A1Q9Y6A2 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC23.1■■□□□ 1.29
CYP46A1Q9Y6A2 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC23.1■■□□□ 1.29
CYP46A1Q9Y6A2 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC23.09■■□□□ 1.29
CYP46A1Q9Y6A2 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CYP46A1Q9Y6A2 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
CYP46A1Q9Y6A2 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CYP46A1Q9Y6A2 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CYP46A1Q9Y6A2 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
CYP46A1Q9Y6A2 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CYP46A1Q9Y6A2 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CYP46A1Q9Y6A2 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC23.09■■□□□ 1.29
CYP46A1Q9Y6A2 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
CYP46A1Q9Y6A2 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CYP46A1Q9Y6A2 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC23.09■■□□□ 1.29
CYP46A1Q9Y6A2 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CYP46A1Q9Y6A2 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CYP46A1Q9Y6A2 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC23.09■■□□□ 1.29
CYP46A1Q9Y6A2 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC23.09■■□□□ 1.29
CYP46A1Q9Y6A2 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC23.09■■□□□ 1.29
CYP46A1Q9Y6A2 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CYP46A1Q9Y6A2 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CYP46A1Q9Y6A2 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
CYP46A1Q9Y6A2 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC23.09■■□□□ 1.29
CYP46A1Q9Y6A2 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC23.09■■□□□ 1.29
CYP46A1Q9Y6A2 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CYP46A1Q9Y6A2 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC23.09■■□□□ 1.29
CYP46A1Q9Y6A2 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC23.09■■□□□ 1.29
CYP46A1Q9Y6A2 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CYP46A1Q9Y6A2 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CYP46A1Q9Y6A2 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CYP46A1Q9Y6A2 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
CYP46A1Q9Y6A2 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
CYP46A1Q9Y6A2 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CYP46A1Q9Y6A2 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC23.08■■□□□ 1.29
CYP46A1Q9Y6A2 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CYP46A1Q9Y6A2 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms