Protein–RNA interactions for Protein: Q9Y2Y8

PRG3, Proteoglycan 3, humanhuman

Predicted RBP Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRG3Q9Y2Y8 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
PRG3Q9Y2Y8 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRG3Q9Y2Y8 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.87■□□□□ 0.93
PRG3Q9Y2Y8 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
PRG3Q9Y2Y8 LIN28AP1-201ENST00000429574 405 ntBASIC20.87■□□□□ 0.93
PRG3Q9Y2Y8 AC091390.4-202ENST00000476426 537 ntBASIC20.87■□□□□ 0.93
PRG3Q9Y2Y8 Z85996.1-201ENST00000494644 937 ntBASIC20.87■□□□□ 0.93
PRG3Q9Y2Y8 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.87■□□□□ 0.93
PRG3Q9Y2Y8 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC20.87■□□□□ 0.93
PRG3Q9Y2Y8 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC20.87■□□□□ 0.93
PRG3Q9Y2Y8 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.87■□□□□ 0.93
PRG3Q9Y2Y8 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRG3Q9Y2Y8 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.87■□□□□ 0.93
PRG3Q9Y2Y8 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRG3Q9Y2Y8 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRG3Q9Y2Y8 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRG3Q9Y2Y8 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRG3Q9Y2Y8 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRG3Q9Y2Y8 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRG3Q9Y2Y8 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
PRG3Q9Y2Y8 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PRG3Q9Y2Y8 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.86■□□□□ 0.93
PRG3Q9Y2Y8 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
PRG3Q9Y2Y8 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
PRG3Q9Y2Y8 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.86■□□□□ 0.93
PRG3Q9Y2Y8 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.86■□□□□ 0.93
PRG3Q9Y2Y8 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.86■□□□□ 0.93
PRG3Q9Y2Y8 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.86■□□□□ 0.93
PRG3Q9Y2Y8 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
PRG3Q9Y2Y8 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
PRG3Q9Y2Y8 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.86■□□□□ 0.93
PRG3Q9Y2Y8 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRG3Q9Y2Y8 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRG3Q9Y2Y8 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.85■□□□□ 0.93
PRG3Q9Y2Y8 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRG3Q9Y2Y8 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
PRG3Q9Y2Y8 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRG3Q9Y2Y8 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
PRG3Q9Y2Y8 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRG3Q9Y2Y8 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.85■□□□□ 0.93
PRG3Q9Y2Y8 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.85■□□□□ 0.93
PRG3Q9Y2Y8 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC20.85■□□□□ 0.93
PRG3Q9Y2Y8 FAM87A-204ENST00000613235 858 ntBASIC20.85■□□□□ 0.93
PRG3Q9Y2Y8 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.85■□□□□ 0.93
PRG3Q9Y2Y8 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC20.85■□□□□ 0.93
PRG3Q9Y2Y8 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
PRG3Q9Y2Y8 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
PRG3Q9Y2Y8 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRG3Q9Y2Y8 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
PRG3Q9Y2Y8 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRG3Q9Y2Y8 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.85■□□□□ 0.93
PRG3Q9Y2Y8 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRG3Q9Y2Y8 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRG3Q9Y2Y8 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PRG3Q9Y2Y8 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRG3Q9Y2Y8 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRG3Q9Y2Y8 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRG3Q9Y2Y8 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PRG3Q9Y2Y8 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.84■□□□□ 0.93
PRG3Q9Y2Y8 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.84■□□□□ 0.93
PRG3Q9Y2Y8 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.84■□□□□ 0.93
PRG3Q9Y2Y8 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.84■□□□□ 0.93
PRG3Q9Y2Y8 AC092667.1-201ENST00000434301 2586 ntBASIC20.84■□□□□ 0.93
PRG3Q9Y2Y8 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRG3Q9Y2Y8 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRG3Q9Y2Y8 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PRG3Q9Y2Y8 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRG3Q9Y2Y8 AC104076.2-201ENST00000448912 469 ntBASIC20.84■□□□□ 0.93
PRG3Q9Y2Y8 AC128688.1-201ENST00000487626 519 ntBASIC20.84■□□□□ 0.93
PRG3Q9Y2Y8 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
PRG3Q9Y2Y8 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.84■□□□□ 0.93
PRG3Q9Y2Y8 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
PRG3Q9Y2Y8 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
PRG3Q9Y2Y8 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
PRG3Q9Y2Y8 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
PRG3Q9Y2Y8 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRG3Q9Y2Y8 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PRG3Q9Y2Y8 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.84■□□□□ 0.93
PRG3Q9Y2Y8 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
PRG3Q9Y2Y8 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.83■□□□□ 0.93
PRG3Q9Y2Y8 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PRG3Q9Y2Y8 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PRG3Q9Y2Y8 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PRG3Q9Y2Y8 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.83■□□□□ 0.93
PRG3Q9Y2Y8 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PRG3Q9Y2Y8 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
PRG3Q9Y2Y8 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PRG3Q9Y2Y8 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.83■□□□□ 0.93
PRG3Q9Y2Y8 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PRG3Q9Y2Y8 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.83■□□□□ 0.93
PRG3Q9Y2Y8 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PRG3Q9Y2Y8 DUX4L26-201ENST00000489078 1255 ntBASIC20.83■□□□□ 0.93
PRG3Q9Y2Y8 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.83■□□□□ 0.93
PRG3Q9Y2Y8 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.83■□□□□ 0.93
PRG3Q9Y2Y8 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.83■□□□□ 0.93
PRG3Q9Y2Y8 AL160286.2-201ENST00000567150 934 ntBASIC20.83■□□□□ 0.93
PRG3Q9Y2Y8 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PRG3Q9Y2Y8 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PRG3Q9Y2Y8 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PRG3Q9Y2Y8 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms