Protein–RNA interactions for Protein: Q9UGU5

HMGXB4, HMG domain-containing protein 4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4Q9UGU5 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.76■□□□□ 0.91
HMGXB4Q9UGU5 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.76■□□□□ 0.91
HMGXB4Q9UGU5 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HMGXB4Q9UGU5 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.76■□□□□ 0.91
HMGXB4Q9UGU5 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.76■□□□□ 0.91
HMGXB4Q9UGU5 HLA-A-209ENST00000638375 975 ntBASIC20.76■□□□□ 0.91
HMGXB4Q9UGU5 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HMGXB4Q9UGU5 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HMGXB4Q9UGU5 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HMGXB4Q9UGU5 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.76■□□□□ 0.91
HMGXB4Q9UGU5 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.75■□□□□ 0.91
HMGXB4Q9UGU5 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
HMGXB4Q9UGU5 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
HMGXB4Q9UGU5 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.75■□□□□ 0.91
HMGXB4Q9UGU5 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HMGXB4Q9UGU5 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HMGXB4Q9UGU5 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HMGXB4Q9UGU5 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HMGXB4Q9UGU5 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.75■□□□□ 0.91
HMGXB4Q9UGU5 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.75■□□□□ 0.91
HMGXB4Q9UGU5 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.75■□□□□ 0.91
HMGXB4Q9UGU5 AC233702.5-201ENST00000584107 538 ntBASIC20.75■□□□□ 0.91
HMGXB4Q9UGU5 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.75■□□□□ 0.91
HMGXB4Q9UGU5 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
HMGXB4Q9UGU5 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HMGXB4Q9UGU5 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
HMGXB4Q9UGU5 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
HMGXB4Q9UGU5 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HMGXB4Q9UGU5 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
HMGXB4Q9UGU5 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
HMGXB4Q9UGU5 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
HMGXB4Q9UGU5 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.74■□□□□ 0.91
HMGXB4Q9UGU5 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HMGXB4Q9UGU5 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HMGXB4Q9UGU5 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HMGXB4Q9UGU5 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
HMGXB4Q9UGU5 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HMGXB4Q9UGU5 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
HMGXB4Q9UGU5 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HMGXB4Q9UGU5 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.74■□□□□ 0.91
HMGXB4Q9UGU5 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
HMGXB4Q9UGU5 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HMGXB4Q9UGU5 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.74■□□□□ 0.91
HMGXB4Q9UGU5 AC012618.2-201ENST00000428058 849 ntBASIC20.74■□□□□ 0.91
HMGXB4Q9UGU5 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.74■□□□□ 0.91
HMGXB4Q9UGU5 RPS2P4-201ENST00000476944 856 ntBASIC20.74■□□□□ 0.91
HMGXB4Q9UGU5 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HMGXB4Q9UGU5 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
HMGXB4Q9UGU5 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.74■□□□□ 0.91
HMGXB4Q9UGU5 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.74■□□□□ 0.91
HMGXB4Q9UGU5 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.74■□□□□ 0.91
HMGXB4Q9UGU5 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.74■□□□□ 0.91
HMGXB4Q9UGU5 AC113410.3-201ENST00000623366 203 ntBASIC20.74■□□□□ 0.91
HMGXB4Q9UGU5 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HMGXB4Q9UGU5 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HMGXB4Q9UGU5 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.74■□□□□ 0.91
HMGXB4Q9UGU5 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.74■□□□□ 0.91
HMGXB4Q9UGU5 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
HMGXB4Q9UGU5 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HMGXB4Q9UGU5 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HMGXB4Q9UGU5 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.73■□□□□ 0.91
HMGXB4Q9UGU5 NIFKP9-201ENST00000419265 221 ntBASIC20.73■□□□□ 0.91
HMGXB4Q9UGU5 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.73■□□□□ 0.91
HMGXB4Q9UGU5 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HMGXB4Q9UGU5 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.73■□□□□ 0.91
HMGXB4Q9UGU5 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.73■□□□□ 0.91
HMGXB4Q9UGU5 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HMGXB4Q9UGU5 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
HMGXB4Q9UGU5 AP006294.2-201ENST00000641667 209 ntBASIC20.73■□□□□ 0.91
HMGXB4Q9UGU5 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
HMGXB4Q9UGU5 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
HMGXB4Q9UGU5 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HMGXB4Q9UGU5 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.73■□□□□ 0.91
HMGXB4Q9UGU5 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
HMGXB4Q9UGU5 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HMGXB4Q9UGU5 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.73■□□□□ 0.91
HMGXB4Q9UGU5 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
HMGXB4Q9UGU5 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.72■□□□□ 0.91
HMGXB4Q9UGU5 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
HMGXB4Q9UGU5 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
HMGXB4Q9UGU5 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.72■□□□□ 0.91
HMGXB4Q9UGU5 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.72■□□□□ 0.91
HMGXB4Q9UGU5 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HMGXB4Q9UGU5 AP002982.1-201ENST00000492365 877 ntBASIC20.72■□□□□ 0.91
HMGXB4Q9UGU5 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HMGXB4Q9UGU5 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.72■□□□□ 0.91
HMGXB4Q9UGU5 AL353708.3-201ENST00000610272 989 ntBASIC20.72■□□□□ 0.91
HMGXB4Q9UGU5 AL049637.2-201ENST00000641778 930 ntBASIC20.72■□□□□ 0.91
HMGXB4Q9UGU5 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.72■□□□□ 0.91
HMGXB4Q9UGU5 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.72■□□□□ 0.91
HMGXB4Q9UGU5 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HMGXB4Q9UGU5 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
HMGXB4Q9UGU5 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
HMGXB4Q9UGU5 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HMGXB4Q9UGU5 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HMGXB4Q9UGU5 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.72■□□□□ 0.91
HMGXB4Q9UGU5 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HMGXB4Q9UGU5 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HMGXB4Q9UGU5 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.72■□□□□ 0.91
HMGXB4Q9UGU5 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms