Protein–RNA interactions for Protein: Q9NVI7

ATAD3A, ATPase family AAA domain-containing protein 3A, humanhuman

Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD3AQ9NVI7 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
ATAD3AQ9NVI7 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ATAD3AQ9NVI7 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATAD3AQ9NVI7 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATAD3AQ9NVI7 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
ATAD3AQ9NVI7 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATAD3AQ9NVI7 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
ATAD3AQ9NVI7 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATAD3AQ9NVI7 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATAD3AQ9NVI7 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATAD3AQ9NVI7 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATAD3AQ9NVI7 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
ATAD3AQ9NVI7 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATAD3AQ9NVI7 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
ATAD3AQ9NVI7 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.67■□□□□ 0.58
ATAD3AQ9NVI7 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ATAD3AQ9NVI7 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATAD3AQ9NVI7 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATAD3AQ9NVI7 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
ATAD3AQ9NVI7 IKBKGP1-201ENST00000612193 1073 ntBASIC18.67■□□□□ 0.58
ATAD3AQ9NVI7 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.67■□□□□ 0.58
ATAD3AQ9NVI7 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATAD3AQ9NVI7 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
ATAD3AQ9NVI7 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATAD3AQ9NVI7 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATAD3AQ9NVI7 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ATAD3AQ9NVI7 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATAD3AQ9NVI7 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ATAD3AQ9NVI7 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATAD3AQ9NVI7 AC004408.2-201ENST00000623613 2777 ntBASIC18.66■□□□□ 0.58
ATAD3AQ9NVI7 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATAD3AQ9NVI7 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.66■□□□□ 0.58
ATAD3AQ9NVI7 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.66■□□□□ 0.58
ATAD3AQ9NVI7 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATAD3AQ9NVI7 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ATAD3AQ9NVI7 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ATAD3AQ9NVI7 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
ATAD3AQ9NVI7 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ATAD3AQ9NVI7 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.66■□□□□ 0.58
ATAD3AQ9NVI7 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
ATAD3AQ9NVI7 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATAD3AQ9NVI7 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATAD3AQ9NVI7 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.66■□□□□ 0.58
ATAD3AQ9NVI7 AL050303.2-201ENST00000619798 666 ntBASIC18.66■□□□□ 0.58
ATAD3AQ9NVI7 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
ATAD3AQ9NVI7 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.66■□□□□ 0.58
ATAD3AQ9NVI7 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATAD3AQ9NVI7 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATAD3AQ9NVI7 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ATAD3AQ9NVI7 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
ATAD3AQ9NVI7 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
ATAD3AQ9NVI7 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATAD3AQ9NVI7 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.66■□□□□ 0.58
ATAD3AQ9NVI7 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ATAD3AQ9NVI7 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATAD3AQ9NVI7 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
ATAD3AQ9NVI7 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.65■□□□□ 0.58
ATAD3AQ9NVI7 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.65■□□□□ 0.58
ATAD3AQ9NVI7 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATAD3AQ9NVI7 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
ATAD3AQ9NVI7 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.65■□□□□ 0.58
ATAD3AQ9NVI7 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.65■□□□□ 0.58
ATAD3AQ9NVI7 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.65■□□□□ 0.58
ATAD3AQ9NVI7 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.65■□□□□ 0.58
ATAD3AQ9NVI7 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.65■□□□□ 0.58
ATAD3AQ9NVI7 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.65■□□□□ 0.58
ATAD3AQ9NVI7 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.65■□□□□ 0.58
ATAD3AQ9NVI7 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.65■□□□□ 0.58
ATAD3AQ9NVI7 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.65■□□□□ 0.58
ATAD3AQ9NVI7 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.65■□□□□ 0.58
ATAD3AQ9NVI7 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATAD3AQ9NVI7 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATAD3AQ9NVI7 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATAD3AQ9NVI7 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.65■□□□□ 0.58
ATAD3AQ9NVI7 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATAD3AQ9NVI7 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATAD3AQ9NVI7 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATAD3AQ9NVI7 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATAD3AQ9NVI7 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ATAD3AQ9NVI7 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ATAD3AQ9NVI7 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.64■□□□□ 0.58
ATAD3AQ9NVI7 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
ATAD3AQ9NVI7 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
ATAD3AQ9NVI7 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.64■□□□□ 0.58
ATAD3AQ9NVI7 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ATAD3AQ9NVI7 AC116351.2-201ENST00000606540 1585 ntBASIC18.64■□□□□ 0.58
ATAD3AQ9NVI7 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATAD3AQ9NVI7 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.64■□□□□ 0.57
ATAD3AQ9NVI7 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATAD3AQ9NVI7 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.64■□□□□ 0.57
ATAD3AQ9NVI7 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.64■□□□□ 0.57
ATAD3AQ9NVI7 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATAD3AQ9NVI7 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.64■□□□□ 0.57
ATAD3AQ9NVI7 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
ATAD3AQ9NVI7 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATAD3AQ9NVI7 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.64■□□□□ 0.57
ATAD3AQ9NVI7 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATAD3AQ9NVI7 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
ATAD3AQ9NVI7 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.64■□□□□ 0.57
ATAD3AQ9NVI7 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms