Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
LIN7CQ9NUP9 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
LIN7CQ9NUP9 AC004408.2-201ENST00000623613 2777 ntBASIC16.2■□□□□ 0.18
LIN7CQ9NUP9 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LIN7CQ9NUP9 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LIN7CQ9NUP9 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LIN7CQ9NUP9 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC16.19■□□□□ 0.18
LIN7CQ9NUP9 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
LIN7CQ9NUP9 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LIN7CQ9NUP9 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC16.19■□□□□ 0.18
LIN7CQ9NUP9 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LIN7CQ9NUP9 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.19■□□□□ 0.18
LIN7CQ9NUP9 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LIN7CQ9NUP9 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LIN7CQ9NUP9 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LIN7CQ9NUP9 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LIN7CQ9NUP9 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
LIN7CQ9NUP9 AL355802.2-201ENST00000402069 882 ntBASIC16.19■□□□□ 0.18
LIN7CQ9NUP9 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LIN7CQ9NUP9 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC16.19■□□□□ 0.18
LIN7CQ9NUP9 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC16.19■□□□□ 0.18
LIN7CQ9NUP9 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC16.19■□□□□ 0.18
LIN7CQ9NUP9 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC16.19■□□□□ 0.18
LIN7CQ9NUP9 AC142086.2-201ENST00000569753 217 ntBASIC16.19■□□□□ 0.18
LIN7CQ9NUP9 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
LIN7CQ9NUP9 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC16.19■□□□□ 0.18
LIN7CQ9NUP9 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LIN7CQ9NUP9 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LIN7CQ9NUP9 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LIN7CQ9NUP9 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LIN7CQ9NUP9 TP73-202ENST00000354437 2140 ntTSL 5 BASIC16.19■□□□□ 0.18
LIN7CQ9NUP9 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.19■□□□□ 0.18
LIN7CQ9NUP9 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LIN7CQ9NUP9 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LIN7CQ9NUP9 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC16.19■□□□□ 0.18
LIN7CQ9NUP9 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LIN7CQ9NUP9 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LIN7CQ9NUP9 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.19■□□□□ 0.18
LIN7CQ9NUP9 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC16.19■□□□□ 0.18
LIN7CQ9NUP9 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
LIN7CQ9NUP9 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LIN7CQ9NUP9 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LIN7CQ9NUP9 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LIN7CQ9NUP9 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
LIN7CQ9NUP9 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.18■□□□□ 0.18
LIN7CQ9NUP9 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LIN7CQ9NUP9 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LIN7CQ9NUP9 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.18■□□□□ 0.18
LIN7CQ9NUP9 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC16.18■□□□□ 0.18
LIN7CQ9NUP9 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
LIN7CQ9NUP9 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LIN7CQ9NUP9 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LIN7CQ9NUP9 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LIN7CQ9NUP9 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LIN7CQ9NUP9 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LIN7CQ9NUP9 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC16.18■□□□□ 0.18
LIN7CQ9NUP9 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LIN7CQ9NUP9 AC073210.2-201ENST00000430369 194 ntBASIC16.18■□□□□ 0.18
LIN7CQ9NUP9 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC16.18■□□□□ 0.18
LIN7CQ9NUP9 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC16.18■□□□□ 0.18
LIN7CQ9NUP9 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC16.18■□□□□ 0.18
LIN7CQ9NUP9 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC16.18■□□□□ 0.18
LIN7CQ9NUP9 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
LIN7CQ9NUP9 GAMT-205ENST00000640762 751 ntTSL 5 BASIC16.18■□□□□ 0.18
LIN7CQ9NUP9 AC133041.1-202ENST00000642053 222 ntBASIC16.18■□□□□ 0.18
LIN7CQ9NUP9 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC16.18■□□□□ 0.18
LIN7CQ9NUP9 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.18■□□□□ 0.18
LIN7CQ9NUP9 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
LIN7CQ9NUP9 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LIN7CQ9NUP9 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LIN7CQ9NUP9 KRT17P1-201ENST00000399211 1546 ntBASIC16.18■□□□□ 0.18
LIN7CQ9NUP9 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LIN7CQ9NUP9 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.18■□□□□ 0.18
LIN7CQ9NUP9 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LIN7CQ9NUP9 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LIN7CQ9NUP9 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LIN7CQ9NUP9 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
LIN7CQ9NUP9 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LIN7CQ9NUP9 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LIN7CQ9NUP9 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.18■□□□□ 0.18
LIN7CQ9NUP9 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LIN7CQ9NUP9 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
LIN7CQ9NUP9 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LIN7CQ9NUP9 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
LIN7CQ9NUP9 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC16.17■□□□□ 0.18
LIN7CQ9NUP9 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LIN7CQ9NUP9 AL032819.2-201ENST00000624543 2162 ntBASIC16.17■□□□□ 0.18
LIN7CQ9NUP9 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.17■□□□□ 0.18
LIN7CQ9NUP9 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC16.17■□□□□ 0.18
LIN7CQ9NUP9 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC16.17■□□□□ 0.18
LIN7CQ9NUP9 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LIN7CQ9NUP9 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC16.17■□□□□ 0.18
LIN7CQ9NUP9 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC16.17■□□□□ 0.18
LIN7CQ9NUP9 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC16.17■□□□□ 0.18
LIN7CQ9NUP9 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC16.17■□□□□ 0.18
LIN7CQ9NUP9 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC16.17■□□□□ 0.18
LIN7CQ9NUP9 RGMA-211ENST00000557420 989 ntTSL 3 BASIC16.17■□□□□ 0.18
LIN7CQ9NUP9 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC16.17■□□□□ 0.18
LIN7CQ9NUP9 AL138781.1-201ENST00000566567 1274 ntBASIC16.17■□□□□ 0.18
LIN7CQ9NUP9 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms