Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.01■□□□□ 0.47
POLR2J3Q9H1A7 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
POLR2J3Q9H1A7 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
POLR2J3Q9H1A7 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
POLR2J3Q9H1A7 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.01■□□□□ 0.47
POLR2J3Q9H1A7 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.01■□□□□ 0.47
POLR2J3Q9H1A7 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
POLR2J3Q9H1A7 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
POLR2J3Q9H1A7 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.01■□□□□ 0.47
POLR2J3Q9H1A7 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
POLR2J3Q9H1A7 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
POLR2J3Q9H1A7 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.01■□□□□ 0.47
POLR2J3Q9H1A7 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
POLR2J3Q9H1A7 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.01■□□□□ 0.47
POLR2J3Q9H1A7 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
POLR2J3Q9H1A7 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
POLR2J3Q9H1A7 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
POLR2J3Q9H1A7 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
POLR2J3Q9H1A7 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
POLR2J3Q9H1A7 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
POLR2J3Q9H1A7 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18■□□□□ 0.47
POLR2J3Q9H1A7 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18■□□□□ 0.47
POLR2J3Q9H1A7 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
POLR2J3Q9H1A7 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
POLR2J3Q9H1A7 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18■□□□□ 0.47
POLR2J3Q9H1A7 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18■□□□□ 0.47
POLR2J3Q9H1A7 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
POLR2J3Q9H1A7 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
POLR2J3Q9H1A7 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
POLR2J3Q9H1A7 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18■□□□□ 0.47
POLR2J3Q9H1A7 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18■□□□□ 0.47
POLR2J3Q9H1A7 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18■□□□□ 0.47
POLR2J3Q9H1A7 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
POLR2J3Q9H1A7 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
POLR2J3Q9H1A7 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
POLR2J3Q9H1A7 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18■□□□□ 0.47
POLR2J3Q9H1A7 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
POLR2J3Q9H1A7 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
POLR2J3Q9H1A7 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18■□□□□ 0.47
POLR2J3Q9H1A7 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18■□□□□ 0.47
POLR2J3Q9H1A7 AC018553.1-201ENST00000616682 1458 ntBASIC18■□□□□ 0.47
POLR2J3Q9H1A7 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18■□□□□ 0.47
POLR2J3Q9H1A7 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
POLR2J3Q9H1A7 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
POLR2J3Q9H1A7 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.99■□□□□ 0.47
POLR2J3Q9H1A7 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
POLR2J3Q9H1A7 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
POLR2J3Q9H1A7 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
POLR2J3Q9H1A7 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
POLR2J3Q9H1A7 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
POLR2J3Q9H1A7 MKRN4P-201ENST00000444706 1521 ntBASIC17.99■□□□□ 0.47
POLR2J3Q9H1A7 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
POLR2J3Q9H1A7 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
POLR2J3Q9H1A7 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
POLR2J3Q9H1A7 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
POLR2J3Q9H1A7 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.99■□□□□ 0.47
POLR2J3Q9H1A7 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.99■□□□□ 0.47
POLR2J3Q9H1A7 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
POLR2J3Q9H1A7 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC17.99■□□□□ 0.47
POLR2J3Q9H1A7 AF201337.1-201ENST00000520239 748 ntBASIC17.99■□□□□ 0.47
POLR2J3Q9H1A7 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.99■□□□□ 0.47
POLR2J3Q9H1A7 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
POLR2J3Q9H1A7 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC17.99■□□□□ 0.47
POLR2J3Q9H1A7 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
POLR2J3Q9H1A7 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.99■□□□□ 0.47
POLR2J3Q9H1A7 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
POLR2J3Q9H1A7 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
POLR2J3Q9H1A7 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.99■□□□□ 0.47
POLR2J3Q9H1A7 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
POLR2J3Q9H1A7 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
POLR2J3Q9H1A7 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.99■□□□□ 0.47
POLR2J3Q9H1A7 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
POLR2J3Q9H1A7 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
POLR2J3Q9H1A7 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
POLR2J3Q9H1A7 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
POLR2J3Q9H1A7 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
POLR2J3Q9H1A7 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
POLR2J3Q9H1A7 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.98■□□□□ 0.47
POLR2J3Q9H1A7 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
POLR2J3Q9H1A7 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.98■□□□□ 0.47
POLR2J3Q9H1A7 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.98■□□□□ 0.47
POLR2J3Q9H1A7 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
POLR2J3Q9H1A7 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
POLR2J3Q9H1A7 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
POLR2J3Q9H1A7 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
POLR2J3Q9H1A7 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
POLR2J3Q9H1A7 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
POLR2J3Q9H1A7 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
POLR2J3Q9H1A7 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
POLR2J3Q9H1A7 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
POLR2J3Q9H1A7 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
POLR2J3Q9H1A7 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.98■□□□□ 0.47
POLR2J3Q9H1A7 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
POLR2J3Q9H1A7 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
POLR2J3Q9H1A7 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
POLR2J3Q9H1A7 AL390719.1-204ENST00000412397 1219 ntBASIC17.98■□□□□ 0.47
POLR2J3Q9H1A7 AC004911.1-201ENST00000416316 871 ntBASIC17.98■□□□□ 0.47
POLR2J3Q9H1A7 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.98■□□□□ 0.47
POLR2J3Q9H1A7 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC17.98■□□□□ 0.47
POLR2J3Q9H1A7 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms