Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
C9orf72Q96LT7 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
C9orf72Q96LT7 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
C9orf72Q96LT7 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
C9orf72Q96LT7 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
C9orf72Q96LT7 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
C9orf72Q96LT7 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
C9orf72Q96LT7 AC105020.6-201ENST00000621523 1217 ntBASIC20.05■□□□□ 0.8
C9orf72Q96LT7 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
C9orf72Q96LT7 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.05■□□□□ 0.8
C9orf72Q96LT7 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
C9orf72Q96LT7 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.05■□□□□ 0.8
C9orf72Q96LT7 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
C9orf72Q96LT7 LINC01465-201ENST00000408887 1940 ntBASIC20.05■□□□□ 0.8
C9orf72Q96LT7 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
C9orf72Q96LT7 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.05■□□□□ 0.8
C9orf72Q96LT7 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
C9orf72Q96LT7 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
C9orf72Q96LT7 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
C9orf72Q96LT7 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.05■□□□□ 0.8
C9orf72Q96LT7 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
C9orf72Q96LT7 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
C9orf72Q96LT7 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
C9orf72Q96LT7 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
C9orf72Q96LT7 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
C9orf72Q96LT7 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
C9orf72Q96LT7 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.04■□□□□ 0.8
C9orf72Q96LT7 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
C9orf72Q96LT7 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
C9orf72Q96LT7 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
C9orf72Q96LT7 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
C9orf72Q96LT7 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
C9orf72Q96LT7 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
C9orf72Q96LT7 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.04■□□□□ 0.8
C9orf72Q96LT7 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.04■□□□□ 0.8
C9orf72Q96LT7 BX276092.2-201ENST00000417668 665 ntBASIC20.04■□□□□ 0.8
C9orf72Q96LT7 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.04■□□□□ 0.8
C9orf72Q96LT7 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.04■□□□□ 0.8
C9orf72Q96LT7 AC092118.2-201ENST00000613495 667 ntBASIC20.04■□□□□ 0.8
C9orf72Q96LT7 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.04■□□□□ 0.8
C9orf72Q96LT7 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
C9orf72Q96LT7 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.04■□□□□ 0.8
C9orf72Q96LT7 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
C9orf72Q96LT7 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
C9orf72Q96LT7 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.04■□□□□ 0.8
C9orf72Q96LT7 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
C9orf72Q96LT7 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
C9orf72Q96LT7 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
C9orf72Q96LT7 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
C9orf72Q96LT7 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
C9orf72Q96LT7 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
C9orf72Q96LT7 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
C9orf72Q96LT7 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
C9orf72Q96LT7 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
C9orf72Q96LT7 AC010980.2-201ENST00000587099 1412 ntBASIC20.03■□□□□ 0.8
C9orf72Q96LT7 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
C9orf72Q96LT7 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.03■□□□□ 0.8
C9orf72Q96LT7 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
C9orf72Q96LT7 PHGDH-210ENST00000641115 1638 ntBASIC20.03■□□□□ 0.8
C9orf72Q96LT7 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
C9orf72Q96LT7 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
C9orf72Q96LT7 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
C9orf72Q96LT7 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.03■□□□□ 0.8
C9orf72Q96LT7 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
C9orf72Q96LT7 AC100791.3-201ENST00000617619 330 ntBASIC20.03■□□□□ 0.8
C9orf72Q96LT7 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.03■□□□□ 0.8
C9orf72Q96LT7 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
C9orf72Q96LT7 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
C9orf72Q96LT7 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.03■□□□□ 0.8
C9orf72Q96LT7 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
C9orf72Q96LT7 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
C9orf72Q96LT7 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.03■□□□□ 0.8
C9orf72Q96LT7 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
C9orf72Q96LT7 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
C9orf72Q96LT7 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
C9orf72Q96LT7 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
C9orf72Q96LT7 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.02■□□□□ 0.8
C9orf72Q96LT7 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.02■□□□□ 0.8
C9orf72Q96LT7 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
C9orf72Q96LT7 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
C9orf72Q96LT7 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.02■□□□□ 0.8
C9orf72Q96LT7 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
C9orf72Q96LT7 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
C9orf72Q96LT7 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
C9orf72Q96LT7 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
C9orf72Q96LT7 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.02■□□□□ 0.79
C9orf72Q96LT7 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.02■□□□□ 0.79
C9orf72Q96LT7 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
C9orf72Q96LT7 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
C9orf72Q96LT7 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
C9orf72Q96LT7 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
C9orf72Q96LT7 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
C9orf72Q96LT7 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
C9orf72Q96LT7 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.01■□□□□ 0.79
C9orf72Q96LT7 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
C9orf72Q96LT7 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
C9orf72Q96LT7 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
C9orf72Q96LT7 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
C9orf72Q96LT7 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
C9orf72Q96LT7 KRT18P68-201ENST00000392293 1000 ntBASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms