Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDLIM5Q96HC4 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
PDLIM5Q96HC4 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDLIM5Q96HC4 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDLIM5Q96HC4 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.06■□□□□ 0.64
PDLIM5Q96HC4 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PDLIM5Q96HC4 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDLIM5Q96HC4 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PDLIM5Q96HC4 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.06■□□□□ 0.64
PDLIM5Q96HC4 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.06■□□□□ 0.64
PDLIM5Q96HC4 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
PDLIM5Q96HC4 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.06■□□□□ 0.64
PDLIM5Q96HC4 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PDLIM5Q96HC4 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDLIM5Q96HC4 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.06■□□□□ 0.64
PDLIM5Q96HC4 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.06■□□□□ 0.64
PDLIM5Q96HC4 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDLIM5Q96HC4 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PDLIM5Q96HC4 AC104417.2-201ENST00000562989 1793 ntBASIC19.06■□□□□ 0.64
PDLIM5Q96HC4 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.06■□□□□ 0.64
PDLIM5Q96HC4 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
PDLIM5Q96HC4 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
PDLIM5Q96HC4 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDLIM5Q96HC4 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.05■□□□□ 0.64
PDLIM5Q96HC4 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
PDLIM5Q96HC4 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.05■□□□□ 0.64
PDLIM5Q96HC4 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDLIM5Q96HC4 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PDLIM5Q96HC4 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
PDLIM5Q96HC4 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
PDLIM5Q96HC4 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PDLIM5Q96HC4 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.05■□□□□ 0.64
PDLIM5Q96HC4 AC026366.1-201ENST00000488803 879 ntBASIC19.05■□□□□ 0.64
PDLIM5Q96HC4 AP003097.1-201ENST00000530657 1135 ntBASIC19.05■□□□□ 0.64
PDLIM5Q96HC4 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.05■□□□□ 0.64
PDLIM5Q96HC4 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDLIM5Q96HC4 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDLIM5Q96HC4 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDLIM5Q96HC4 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PDLIM5Q96HC4 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.05■□□□□ 0.64
PDLIM5Q96HC4 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PDLIM5Q96HC4 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDLIM5Q96HC4 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
PDLIM5Q96HC4 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.05■□□□□ 0.64
PDLIM5Q96HC4 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.05■□□□□ 0.64
PDLIM5Q96HC4 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDLIM5Q96HC4 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PDLIM5Q96HC4 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDLIM5Q96HC4 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDLIM5Q96HC4 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
PDLIM5Q96HC4 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
PDLIM5Q96HC4 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
PDLIM5Q96HC4 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
PDLIM5Q96HC4 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDLIM5Q96HC4 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.04■□□□□ 0.64
PDLIM5Q96HC4 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
PDLIM5Q96HC4 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
PDLIM5Q96HC4 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.04■□□□□ 0.64
PDLIM5Q96HC4 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.04■□□□□ 0.64
PDLIM5Q96HC4 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.04■□□□□ 0.64
PDLIM5Q96HC4 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PDLIM5Q96HC4 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.04■□□□□ 0.64
PDLIM5Q96HC4 PRKY-204ENST00000533551 1019 ntBASIC19.04■□□□□ 0.64
PDLIM5Q96HC4 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.04■□□□□ 0.64
PDLIM5Q96HC4 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.04■□□□□ 0.64
PDLIM5Q96HC4 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.04■□□□□ 0.64
PDLIM5Q96HC4 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
PDLIM5Q96HC4 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PDLIM5Q96HC4 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
PDLIM5Q96HC4 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
PDLIM5Q96HC4 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.03■□□□□ 0.64
PDLIM5Q96HC4 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
PDLIM5Q96HC4 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PDLIM5Q96HC4 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDLIM5Q96HC4 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
PDLIM5Q96HC4 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDLIM5Q96HC4 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.03■□□□□ 0.64
PDLIM5Q96HC4 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
PDLIM5Q96HC4 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PDLIM5Q96HC4 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PDLIM5Q96HC4 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.03■□□□□ 0.64
PDLIM5Q96HC4 KRT17P3-201ENST00000420566 1262 ntBASIC19.03■□□□□ 0.64
PDLIM5Q96HC4 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PDLIM5Q96HC4 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.03■□□□□ 0.64
PDLIM5Q96HC4 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.03■□□□□ 0.64
PDLIM5Q96HC4 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.03■□□□□ 0.64
PDLIM5Q96HC4 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PDLIM5Q96HC4 RNA5SP413-201ENST00000516373 109 ntBASIC19.03■□□□□ 0.64
PDLIM5Q96HC4 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PDLIM5Q96HC4 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
PDLIM5Q96HC4 KRT18P6-201ENST00000555540 1265 ntBASIC19.03■□□□□ 0.64
PDLIM5Q96HC4 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDLIM5Q96HC4 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.03■□□□□ 0.64
PDLIM5Q96HC4 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDLIM5Q96HC4 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.03■□□□□ 0.64
PDLIM5Q96HC4 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDLIM5Q96HC4 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.03■□□□□ 0.64
PDLIM5Q96HC4 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
PDLIM5Q96HC4 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDLIM5Q96HC4 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms