Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
HPS1Q92902 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
HPS1Q92902 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.74■□□□□ 0.43
HPS1Q92902 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.74■□□□□ 0.43
HPS1Q92902 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HPS1Q92902 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HPS1Q92902 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HPS1Q92902 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
HPS1Q92902 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HPS1Q92902 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
HPS1Q92902 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
HPS1Q92902 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
HPS1Q92902 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HPS1Q92902 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HPS1Q92902 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HPS1Q92902 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.73■□□□□ 0.43
HPS1Q92902 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HPS1Q92902 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
HPS1Q92902 KRT16P2-201ENST00000414673 1423 ntBASIC17.73■□□□□ 0.43
HPS1Q92902 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HPS1Q92902 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17.73■□□□□ 0.43
HPS1Q92902 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
HPS1Q92902 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HPS1Q92902 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HPS1Q92902 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
HPS1Q92902 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HPS1Q92902 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.73■□□□□ 0.43
HPS1Q92902 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HPS1Q92902 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.73■□□□□ 0.43
HPS1Q92902 SLC29A4P1-201ENST00000398760 971 ntBASIC17.73■□□□□ 0.43
HPS1Q92902 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HPS1Q92902 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HPS1Q92902 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HPS1Q92902 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HPS1Q92902 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HPS1Q92902 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
HPS1Q92902 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HPS1Q92902 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HPS1Q92902 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.73■□□□□ 0.43
HPS1Q92902 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.73■□□□□ 0.43
HPS1Q92902 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HPS1Q92902 AC093484.2-201ENST00000580996 2166 ntBASIC17.73■□□□□ 0.43
HPS1Q92902 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.73■□□□□ 0.43
HPS1Q92902 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HPS1Q92902 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
HPS1Q92902 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
HPS1Q92902 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HPS1Q92902 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HPS1Q92902 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.72■□□□□ 0.43
HPS1Q92902 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HPS1Q92902 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
HPS1Q92902 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
HPS1Q92902 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HPS1Q92902 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.72■□□□□ 0.43
HPS1Q92902 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.72■□□□□ 0.43
HPS1Q92902 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HPS1Q92902 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.72■□□□□ 0.43
HPS1Q92902 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
HPS1Q92902 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HPS1Q92902 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.72■□□□□ 0.43
HPS1Q92902 SLC7A5P2-201ENST00000553010 536 ntBASIC17.72■□□□□ 0.43
HPS1Q92902 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.72■□□□□ 0.43
HPS1Q92902 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HPS1Q92902 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC17.72■□□□□ 0.43
HPS1Q92902 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
HPS1Q92902 AL050303.2-201ENST00000619798 666 ntBASIC17.72■□□□□ 0.43
HPS1Q92902 AC010536.3-201ENST00000620306 533 ntBASIC17.72■□□□□ 0.43
HPS1Q92902 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
HPS1Q92902 AC139713.2-201ENST00000641328 2723 ntBASIC17.72■□□□□ 0.43
HPS1Q92902 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HPS1Q92902 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
HPS1Q92902 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
HPS1Q92902 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HPS1Q92902 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HPS1Q92902 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
HPS1Q92902 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.71■□□□□ 0.43
HPS1Q92902 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
HPS1Q92902 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HPS1Q92902 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HPS1Q92902 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.71■□□□□ 0.43
HPS1Q92902 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HPS1Q92902 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HPS1Q92902 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.71■□□□□ 0.43
HPS1Q92902 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
HPS1Q92902 AC133552.2-202ENST00000575694 574 ntBASIC17.71■□□□□ 0.43
HPS1Q92902 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.71■□□□□ 0.43
HPS1Q92902 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
HPS1Q92902 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.71■□□□□ 0.43
HPS1Q92902 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HPS1Q92902 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.71■□□□□ 0.43
HPS1Q92902 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
HPS1Q92902 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
HPS1Q92902 AC099398.1-201ENST00000567919 2776 ntBASIC17.71■□□□□ 0.43
HPS1Q92902 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.71■□□□□ 0.43
HPS1Q92902 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.71■□□□□ 0.43
HPS1Q92902 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HPS1Q92902 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
HPS1Q92902 AIRN-201ENST00000601203 4374 ntBASIC17.71■□□□□ 0.43
HPS1Q92902 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HPS1Q92902 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms