Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.26■□□□□ 0.83
SH3RF2Q8TEC5 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
SH3RF2Q8TEC5 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SH3RF2Q8TEC5 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.26■□□□□ 0.83
SH3RF2Q8TEC5 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SH3RF2Q8TEC5 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.26■□□□□ 0.83
SH3RF2Q8TEC5 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.26■□□□□ 0.83
SH3RF2Q8TEC5 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.26■□□□□ 0.83
SH3RF2Q8TEC5 TMPOP1-202ENST00000424642 1267 ntBASIC20.26■□□□□ 0.83
SH3RF2Q8TEC5 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.26■□□□□ 0.83
SH3RF2Q8TEC5 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.26■□□□□ 0.83
SH3RF2Q8TEC5 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.26■□□□□ 0.83
SH3RF2Q8TEC5 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.26■□□□□ 0.83
SH3RF2Q8TEC5 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SH3RF2Q8TEC5 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SH3RF2Q8TEC5 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
SH3RF2Q8TEC5 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
SH3RF2Q8TEC5 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
SH3RF2Q8TEC5 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SH3RF2Q8TEC5 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.26■□□□□ 0.83
SH3RF2Q8TEC5 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.25■□□□□ 0.83
SH3RF2Q8TEC5 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SH3RF2Q8TEC5 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SH3RF2Q8TEC5 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
SH3RF2Q8TEC5 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.25■□□□□ 0.83
SH3RF2Q8TEC5 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.25■□□□□ 0.83
SH3RF2Q8TEC5 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SH3RF2Q8TEC5 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SH3RF2Q8TEC5 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SH3RF2Q8TEC5 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.25■□□□□ 0.83
SH3RF2Q8TEC5 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.25■□□□□ 0.83
SH3RF2Q8TEC5 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.25■□□□□ 0.83
SH3RF2Q8TEC5 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.25■□□□□ 0.83
SH3RF2Q8TEC5 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SH3RF2Q8TEC5 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SH3RF2Q8TEC5 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.25■□□□□ 0.83
SH3RF2Q8TEC5 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.25■□□□□ 0.83
SH3RF2Q8TEC5 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SH3RF2Q8TEC5 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SH3RF2Q8TEC5 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SH3RF2Q8TEC5 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.24■□□□□ 0.83
SH3RF2Q8TEC5 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SH3RF2Q8TEC5 AL162377.1-201ENST00000618844 1793 ntBASIC20.24■□□□□ 0.83
SH3RF2Q8TEC5 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SH3RF2Q8TEC5 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SH3RF2Q8TEC5 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SH3RF2Q8TEC5 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SH3RF2Q8TEC5 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.24■□□□□ 0.83
SH3RF2Q8TEC5 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
SH3RF2Q8TEC5 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
SH3RF2Q8TEC5 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.24■□□□□ 0.83
SH3RF2Q8TEC5 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
SH3RF2Q8TEC5 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.24■□□□□ 0.83
SH3RF2Q8TEC5 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SH3RF2Q8TEC5 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SH3RF2Q8TEC5 DGCR10-201ENST00000609839 495 ntBASIC20.24■□□□□ 0.83
SH3RF2Q8TEC5 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
SH3RF2Q8TEC5 AP001271.2-201ENST00000624018 1556 ntBASIC20.24■□□□□ 0.83
SH3RF2Q8TEC5 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
SH3RF2Q8TEC5 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SH3RF2Q8TEC5 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
SH3RF2Q8TEC5 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
SH3RF2Q8TEC5 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SH3RF2Q8TEC5 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SH3RF2Q8TEC5 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.23■□□□□ 0.83
SH3RF2Q8TEC5 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SH3RF2Q8TEC5 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SH3RF2Q8TEC5 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SH3RF2Q8TEC5 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.23■□□□□ 0.83
SH3RF2Q8TEC5 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SH3RF2Q8TEC5 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SH3RF2Q8TEC5 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SH3RF2Q8TEC5 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SH3RF2Q8TEC5 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
SH3RF2Q8TEC5 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SH3RF2Q8TEC5 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.23■□□□□ 0.83
SH3RF2Q8TEC5 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.23■□□□□ 0.83
SH3RF2Q8TEC5 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
SH3RF2Q8TEC5 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.23■□□□□ 0.83
SH3RF2Q8TEC5 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.23■□□□□ 0.83
SH3RF2Q8TEC5 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.23■□□□□ 0.83
SH3RF2Q8TEC5 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.23■□□□□ 0.83
SH3RF2Q8TEC5 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.23■□□□□ 0.83
SH3RF2Q8TEC5 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SH3RF2Q8TEC5 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.23■□□□□ 0.83
SH3RF2Q8TEC5 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SH3RF2Q8TEC5 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.23■□□□□ 0.83
SH3RF2Q8TEC5 KRT18P22-201ENST00000402024 1347 ntBASIC20.23■□□□□ 0.83
SH3RF2Q8TEC5 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SH3RF2Q8TEC5 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
SH3RF2Q8TEC5 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SH3RF2Q8TEC5 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SH3RF2Q8TEC5 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
SH3RF2Q8TEC5 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SH3RF2Q8TEC5 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SH3RF2Q8TEC5 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SH3RF2Q8TEC5 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SH3RF2Q8TEC5 AC005521.1-201ENST00000393351 872 ntBASIC20.22■□□□□ 0.83
SH3RF2Q8TEC5 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.22■□□□□ 0.83
SH3RF2Q8TEC5 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms