Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB3IL1Q8TBN0 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
RAB3IL1Q8TBN0 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RAB3IL1Q8TBN0 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB3IL1Q8TBN0 AC079598.2-202ENST00000546624 1451 ntBASIC19.42■□□□□ 0.7
RAB3IL1Q8TBN0 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB3IL1Q8TBN0 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB3IL1Q8TBN0 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
RAB3IL1Q8TBN0 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RAB3IL1Q8TBN0 AC123595.1-201ENST00000440769 1046 ntBASIC19.42■□□□□ 0.7
RAB3IL1Q8TBN0 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.42■□□□□ 0.7
RAB3IL1Q8TBN0 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.42■□□□□ 0.7
RAB3IL1Q8TBN0 TERF1P2-201ENST00000583350 1212 ntBASIC19.42■□□□□ 0.7
RAB3IL1Q8TBN0 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.42■□□□□ 0.7
RAB3IL1Q8TBN0 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.42■□□□□ 0.7
RAB3IL1Q8TBN0 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RAB3IL1Q8TBN0 OR6D1P-202ENST00000641007 5290 ntBASIC19.42■□□□□ 0.7
RAB3IL1Q8TBN0 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.42■□□□□ 0.7
RAB3IL1Q8TBN0 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB3IL1Q8TBN0 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB3IL1Q8TBN0 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB3IL1Q8TBN0 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB3IL1Q8TBN0 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB3IL1Q8TBN0 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB3IL1Q8TBN0 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB3IL1Q8TBN0 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB3IL1Q8TBN0 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.41■□□□□ 0.7
RAB3IL1Q8TBN0 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.41■□□□□ 0.7
RAB3IL1Q8TBN0 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB3IL1Q8TBN0 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RAB3IL1Q8TBN0 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
RAB3IL1Q8TBN0 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.41■□□□□ 0.7
RAB3IL1Q8TBN0 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.41■□□□□ 0.7
RAB3IL1Q8TBN0 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.41■□□□□ 0.7
RAB3IL1Q8TBN0 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB3IL1Q8TBN0 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RAB3IL1Q8TBN0 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.41■□□□□ 0.7
RAB3IL1Q8TBN0 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB3IL1Q8TBN0 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB3IL1Q8TBN0 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RAB3IL1Q8TBN0 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.41■□□□□ 0.7
RAB3IL1Q8TBN0 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB3IL1Q8TBN0 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB3IL1Q8TBN0 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RAB3IL1Q8TBN0 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB3IL1Q8TBN0 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB3IL1Q8TBN0 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
RAB3IL1Q8TBN0 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB3IL1Q8TBN0 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB3IL1Q8TBN0 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
RAB3IL1Q8TBN0 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.4■□□□□ 0.7
RAB3IL1Q8TBN0 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RAB3IL1Q8TBN0 AL162412.1-201ENST00000567129 965 ntBASIC19.4■□□□□ 0.7
RAB3IL1Q8TBN0 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
RAB3IL1Q8TBN0 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB3IL1Q8TBN0 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB3IL1Q8TBN0 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB3IL1Q8TBN0 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB3IL1Q8TBN0 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB3IL1Q8TBN0 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB3IL1Q8TBN0 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB3IL1Q8TBN0 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
RAB3IL1Q8TBN0 PHGDH-210ENST00000641115 1638 ntBASIC19.4■□□□□ 0.7
RAB3IL1Q8TBN0 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
RAB3IL1Q8TBN0 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RAB3IL1Q8TBN0 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
RAB3IL1Q8TBN0 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB3IL1Q8TBN0 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RAB3IL1Q8TBN0 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB3IL1Q8TBN0 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB3IL1Q8TBN0 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB3IL1Q8TBN0 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB3IL1Q8TBN0 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
RAB3IL1Q8TBN0 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB3IL1Q8TBN0 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.39■□□□□ 0.69
RAB3IL1Q8TBN0 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RAB3IL1Q8TBN0 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.39■□□□□ 0.69
RAB3IL1Q8TBN0 AL591742.1-201ENST00000604433 565 ntBASIC19.39■□□□□ 0.69
RAB3IL1Q8TBN0 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB3IL1Q8TBN0 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB3IL1Q8TBN0 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB3IL1Q8TBN0 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
RAB3IL1Q8TBN0 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB3IL1Q8TBN0 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.39■□□□□ 0.69
RAB3IL1Q8TBN0 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.39■□□□□ 0.69
RAB3IL1Q8TBN0 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.39■□□□□ 0.69
RAB3IL1Q8TBN0 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
RAB3IL1Q8TBN0 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.39■□□□□ 0.69
RAB3IL1Q8TBN0 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.39■□□□□ 0.69
RAB3IL1Q8TBN0 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RAB3IL1Q8TBN0 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB3IL1Q8TBN0 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RAB3IL1Q8TBN0 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB3IL1Q8TBN0 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.39■□□□□ 0.69
RAB3IL1Q8TBN0 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RAB3IL1Q8TBN0 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.39■□□□□ 0.69
RAB3IL1Q8TBN0 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.39■□□□□ 0.69
RAB3IL1Q8TBN0 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB3IL1Q8TBN0 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
RAB3IL1Q8TBN0 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms