Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIMC1Q8NDZ2 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SIMC1Q8NDZ2 TSPY20P-201ENST00000450910 630 ntBASIC18.37■□□□□ 0.53
SIMC1Q8NDZ2 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SIMC1Q8NDZ2 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.37■□□□□ 0.53
SIMC1Q8NDZ2 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SIMC1Q8NDZ2 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIMC1Q8NDZ2 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SIMC1Q8NDZ2 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIMC1Q8NDZ2 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SIMC1Q8NDZ2 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SIMC1Q8NDZ2 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIMC1Q8NDZ2 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIMC1Q8NDZ2 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SIMC1Q8NDZ2 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIMC1Q8NDZ2 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SIMC1Q8NDZ2 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIMC1Q8NDZ2 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SIMC1Q8NDZ2 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SIMC1Q8NDZ2 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SIMC1Q8NDZ2 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SIMC1Q8NDZ2 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SIMC1Q8NDZ2 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SIMC1Q8NDZ2 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SIMC1Q8NDZ2 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
SIMC1Q8NDZ2 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SIMC1Q8NDZ2 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SIMC1Q8NDZ2 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.36■□□□□ 0.53
SIMC1Q8NDZ2 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SIMC1Q8NDZ2 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SIMC1Q8NDZ2 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.36■□□□□ 0.53
SIMC1Q8NDZ2 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SIMC1Q8NDZ2 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.36■□□□□ 0.53
SIMC1Q8NDZ2 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.36■□□□□ 0.53
SIMC1Q8NDZ2 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SIMC1Q8NDZ2 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.36■□□□□ 0.53
SIMC1Q8NDZ2 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SIMC1Q8NDZ2 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SIMC1Q8NDZ2 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.36■□□□□ 0.53
SIMC1Q8NDZ2 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SIMC1Q8NDZ2 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.36■□□□□ 0.53
SIMC1Q8NDZ2 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.35■□□□□ 0.53
SIMC1Q8NDZ2 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
SIMC1Q8NDZ2 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SIMC1Q8NDZ2 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.35■□□□□ 0.53
SIMC1Q8NDZ2 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SIMC1Q8NDZ2 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.35■□□□□ 0.53
SIMC1Q8NDZ2 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
SIMC1Q8NDZ2 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SIMC1Q8NDZ2 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
SIMC1Q8NDZ2 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SIMC1Q8NDZ2 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SIMC1Q8NDZ2 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SIMC1Q8NDZ2 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SIMC1Q8NDZ2 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SIMC1Q8NDZ2 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
SIMC1Q8NDZ2 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.35■□□□□ 0.53
SIMC1Q8NDZ2 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.35■□□□□ 0.53
SIMC1Q8NDZ2 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
SIMC1Q8NDZ2 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.35■□□□□ 0.53
SIMC1Q8NDZ2 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SIMC1Q8NDZ2 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SIMC1Q8NDZ2 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SIMC1Q8NDZ2 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SIMC1Q8NDZ2 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SIMC1Q8NDZ2 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
SIMC1Q8NDZ2 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SIMC1Q8NDZ2 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SIMC1Q8NDZ2 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SIMC1Q8NDZ2 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SIMC1Q8NDZ2 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SIMC1Q8NDZ2 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.34■□□□□ 0.53
SIMC1Q8NDZ2 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SIMC1Q8NDZ2 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SIMC1Q8NDZ2 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SIMC1Q8NDZ2 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SIMC1Q8NDZ2 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SIMC1Q8NDZ2 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SIMC1Q8NDZ2 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.34■□□□□ 0.53
SIMC1Q8NDZ2 AC069544.1-201ENST00000609399 999 ntBASIC18.34■□□□□ 0.53
SIMC1Q8NDZ2 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SIMC1Q8NDZ2 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.34■□□□□ 0.53
SIMC1Q8NDZ2 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.34■□□□□ 0.53
SIMC1Q8NDZ2 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SIMC1Q8NDZ2 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SIMC1Q8NDZ2 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SIMC1Q8NDZ2 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SIMC1Q8NDZ2 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SIMC1Q8NDZ2 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SIMC1Q8NDZ2 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SIMC1Q8NDZ2 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SIMC1Q8NDZ2 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SIMC1Q8NDZ2 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SIMC1Q8NDZ2 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SIMC1Q8NDZ2 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SIMC1Q8NDZ2 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.33■□□□□ 0.52
SIMC1Q8NDZ2 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.33■□□□□ 0.52
SIMC1Q8NDZ2 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.33■□□□□ 0.52
SIMC1Q8NDZ2 AC006058.3-201ENST00000606217 1069 ntBASIC18.33■□□□□ 0.52
SIMC1Q8NDZ2 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms