Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC89Q8N998 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.22■□□□□ 0.83
CCDC89Q8N998 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.22■□□□□ 0.83
CCDC89Q8N998 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC89Q8N998 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CCDC89Q8N998 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
CCDC89Q8N998 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC89Q8N998 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CCDC89Q8N998 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC89Q8N998 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC89Q8N998 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC89Q8N998 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC89Q8N998 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC89Q8N998 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.21■□□□□ 0.83
CCDC89Q8N998 GPX1P1-201ENST00000388829 606 ntBASIC20.21■□□□□ 0.83
CCDC89Q8N998 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.21■□□□□ 0.83
CCDC89Q8N998 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.21■□□□□ 0.83
CCDC89Q8N998 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.21■□□□□ 0.83
CCDC89Q8N998 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CCDC89Q8N998 AC105036.2-201ENST00000569468 176 ntBASIC20.21■□□□□ 0.83
CCDC89Q8N998 AC073111.5-205ENST00000641717 521 ntBASIC20.21■□□□□ 0.83
CCDC89Q8N998 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CCDC89Q8N998 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC89Q8N998 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
CCDC89Q8N998 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC89Q8N998 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
CCDC89Q8N998 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC89Q8N998 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC89Q8N998 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC89Q8N998 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC89Q8N998 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC89Q8N998 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC89Q8N998 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC89Q8N998 AC018553.1-201ENST00000616682 1458 ntBASIC20.2■□□□□ 0.82
CCDC89Q8N998 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
CCDC89Q8N998 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.2■□□□□ 0.82
CCDC89Q8N998 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.2■□□□□ 0.82
CCDC89Q8N998 AF201337.1-201ENST00000520239 748 ntBASIC20.2■□□□□ 0.82
CCDC89Q8N998 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC89Q8N998 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC89Q8N998 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC89Q8N998 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.2■□□□□ 0.82
CCDC89Q8N998 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC89Q8N998 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.2■□□□□ 0.82
CCDC89Q8N998 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC89Q8N998 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
CCDC89Q8N998 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC89Q8N998 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC89Q8N998 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC89Q8N998 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC89Q8N998 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CCDC89Q8N998 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC89Q8N998 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC89Q8N998 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CCDC89Q8N998 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.19■□□□□ 0.82
CCDC89Q8N998 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC89Q8N998 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
CCDC89Q8N998 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC89Q8N998 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.19■□□□□ 0.82
CCDC89Q8N998 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.19■□□□□ 0.82
CCDC89Q8N998 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.19■□□□□ 0.82
CCDC89Q8N998 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC89Q8N998 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC89Q8N998 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.19■□□□□ 0.82
CCDC89Q8N998 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CCDC89Q8N998 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC89Q8N998 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC89Q8N998 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC89Q8N998 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC89Q8N998 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
CCDC89Q8N998 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC89Q8N998 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC89Q8N998 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC89Q8N998 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC89Q8N998 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC89Q8N998 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC89Q8N998 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC89Q8N998 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC89Q8N998 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CCDC89Q8N998 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC89Q8N998 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC89Q8N998 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
CCDC89Q8N998 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC89Q8N998 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC89Q8N998 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC89Q8N998 BX276092.2-201ENST00000417668 665 ntBASIC20.18■□□□□ 0.82
CCDC89Q8N998 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.18■□□□□ 0.82
CCDC89Q8N998 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC89Q8N998 AC092437.1-201ENST00000624794 1048 ntBASIC20.18■□□□□ 0.82
CCDC89Q8N998 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC89Q8N998 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC89Q8N998 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
CCDC89Q8N998 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC89Q8N998 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC89Q8N998 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC89Q8N998 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.18■□□□□ 0.82
CCDC89Q8N998 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
CCDC89Q8N998 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC89Q8N998 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC89Q8N998 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms