Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SHFQ7M4L6 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.61■□□□□ 0.41
SHFQ7M4L6 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.61■□□□□ 0.41
SHFQ7M4L6 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHFQ7M4L6 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHFQ7M4L6 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SHFQ7M4L6 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SHFQ7M4L6 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SHFQ7M4L6 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHFQ7M4L6 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SHFQ7M4L6 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHFQ7M4L6 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.61■□□□□ 0.41
SHFQ7M4L6 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SHFQ7M4L6 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SHFQ7M4L6 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.6■□□□□ 0.41
SHFQ7M4L6 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SHFQ7M4L6 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SHFQ7M4L6 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SHFQ7M4L6 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SHFQ7M4L6 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SHFQ7M4L6 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SHFQ7M4L6 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SHFQ7M4L6 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SHFQ7M4L6 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
SHFQ7M4L6 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
SHFQ7M4L6 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SHFQ7M4L6 HLA-G-202ENST00000376815 851 ntBASIC17.6■□□□□ 0.41
SHFQ7M4L6 HLA-G-203ENST00000376818 1127 ntBASIC17.6■□□□□ 0.41
SHFQ7M4L6 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.6■□□□□ 0.41
SHFQ7M4L6 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.6■□□□□ 0.41
SHFQ7M4L6 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC17.6■□□□□ 0.41
SHFQ7M4L6 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SHFQ7M4L6 AC011767.1-201ENST00000617410 1153 ntBASIC17.6■□□□□ 0.41
SHFQ7M4L6 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.6■□□□□ 0.41
SHFQ7M4L6 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SHFQ7M4L6 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SHFQ7M4L6 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.6■□□□□ 0.41
SHFQ7M4L6 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SHFQ7M4L6 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SHFQ7M4L6 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.6■□□□□ 0.41
SHFQ7M4L6 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.6■□□□□ 0.41
SHFQ7M4L6 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.6■□□□□ 0.41
SHFQ7M4L6 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SHFQ7M4L6 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SHFQ7M4L6 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SHFQ7M4L6 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SHFQ7M4L6 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SHFQ7M4L6 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SHFQ7M4L6 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SHFQ7M4L6 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SHFQ7M4L6 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SHFQ7M4L6 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SHFQ7M4L6 AC026471.1-201ENST00000564629 3026 ntBASIC17.59■□□□□ 0.41
SHFQ7M4L6 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SHFQ7M4L6 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.59■□□□□ 0.41
SHFQ7M4L6 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.59■□□□□ 0.41
SHFQ7M4L6 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
SHFQ7M4L6 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.59■□□□□ 0.41
SHFQ7M4L6 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SHFQ7M4L6 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SHFQ7M4L6 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.59■□□□□ 0.41
SHFQ7M4L6 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.59■□□□□ 0.41
SHFQ7M4L6 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SHFQ7M4L6 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SHFQ7M4L6 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SHFQ7M4L6 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.59■□□□□ 0.41
SHFQ7M4L6 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.59■□□□□ 0.41
SHFQ7M4L6 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SHFQ7M4L6 AC231657.2-201ENST00000624556 255 ntBASIC17.59■□□□□ 0.41
SHFQ7M4L6 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SHFQ7M4L6 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.59■□□□□ 0.41
SHFQ7M4L6 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SHFQ7M4L6 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
SHFQ7M4L6 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.59■□□□□ 0.41
SHFQ7M4L6 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SHFQ7M4L6 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
SHFQ7M4L6 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SHFQ7M4L6 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
SHFQ7M4L6 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
SHFQ7M4L6 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.41
SHFQ7M4L6 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SHFQ7M4L6 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
SHFQ7M4L6 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SHFQ7M4L6 AC006015.1-201ENST00000429970 570 ntBASIC17.58■□□□□ 0.4
SHFQ7M4L6 CYP2T3P-201ENST00000601990 817 ntBASIC17.58■□□□□ 0.4
SHFQ7M4L6 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.58■□□□□ 0.4
SHFQ7M4L6 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SHFQ7M4L6 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SHFQ7M4L6 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
SHFQ7M4L6 AC104581.1-202ENST00000635932 2618 ntBASIC17.58■□□□□ 0.4
SHFQ7M4L6 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.58■□□□□ 0.4
SHFQ7M4L6 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.58■□□□□ 0.4
SHFQ7M4L6 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
SHFQ7M4L6 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SHFQ7M4L6 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SHFQ7M4L6 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.58■□□□□ 0.4
SHFQ7M4L6 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SHFQ7M4L6 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SHFQ7M4L6 AL049812.1-201ENST00000432563 2267 ntBASIC17.58■□□□□ 0.4
SHFQ7M4L6 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms