Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
NIPAL3Q6P499 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
NIPAL3Q6P499 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NIPAL3Q6P499 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
NIPAL3Q6P499 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NIPAL3Q6P499 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NIPAL3Q6P499 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NIPAL3Q6P499 PNMA6B-201ENST00000538162 1200 ntBASIC17.74■□□□□ 0.43
NIPAL3Q6P499 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.74■□□□□ 0.43
NIPAL3Q6P499 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NIPAL3Q6P499 AC005829.2-201ENST00000571422 1056 ntBASIC17.74■□□□□ 0.43
NIPAL3Q6P499 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.74■□□□□ 0.43
NIPAL3Q6P499 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
NIPAL3Q6P499 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NIPAL3Q6P499 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NIPAL3Q6P499 AL032819.2-201ENST00000624543 2162 ntBASIC17.74■□□□□ 0.43
NIPAL3Q6P499 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NIPAL3Q6P499 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.74■□□□□ 0.43
NIPAL3Q6P499 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
NIPAL3Q6P499 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NIPAL3Q6P499 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.74■□□□□ 0.43
NIPAL3Q6P499 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
NIPAL3Q6P499 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NIPAL3Q6P499 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NIPAL3Q6P499 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NIPAL3Q6P499 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NIPAL3Q6P499 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.73■□□□□ 0.43
NIPAL3Q6P499 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
NIPAL3Q6P499 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NIPAL3Q6P499 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NIPAL3Q6P499 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NIPAL3Q6P499 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NIPAL3Q6P499 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NIPAL3Q6P499 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NIPAL3Q6P499 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NIPAL3Q6P499 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NIPAL3Q6P499 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.73■□□□□ 0.43
NIPAL3Q6P499 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NIPAL3Q6P499 RNA5SP413-201ENST00000516373 109 ntBASIC17.73■□□□□ 0.43
NIPAL3Q6P499 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NIPAL3Q6P499 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.73■□□□□ 0.43
NIPAL3Q6P499 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NIPAL3Q6P499 AC006557.6-201ENST00000623071 864 ntBASIC17.73■□□□□ 0.43
NIPAL3Q6P499 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
NIPAL3Q6P499 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
NIPAL3Q6P499 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NIPAL3Q6P499 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.73■□□□□ 0.43
NIPAL3Q6P499 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NIPAL3Q6P499 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
NIPAL3Q6P499 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NIPAL3Q6P499 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NIPAL3Q6P499 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NIPAL3Q6P499 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.72■□□□□ 0.43
NIPAL3Q6P499 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
NIPAL3Q6P499 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NIPAL3Q6P499 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
NIPAL3Q6P499 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.72■□□□□ 0.43
NIPAL3Q6P499 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
NIPAL3Q6P499 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.72■□□□□ 0.43
NIPAL3Q6P499 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.72■□□□□ 0.43
NIPAL3Q6P499 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NIPAL3Q6P499 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.72■□□□□ 0.43
NIPAL3Q6P499 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NIPAL3Q6P499 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NIPAL3Q6P499 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
NIPAL3Q6P499 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NIPAL3Q6P499 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.72■□□□□ 0.43
NIPAL3Q6P499 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NIPAL3Q6P499 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
NIPAL3Q6P499 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NIPAL3Q6P499 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NIPAL3Q6P499 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NIPAL3Q6P499 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
NIPAL3Q6P499 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.72■□□□□ 0.43
NIPAL3Q6P499 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NIPAL3Q6P499 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NIPAL3Q6P499 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.71■□□□□ 0.43
NIPAL3Q6P499 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NIPAL3Q6P499 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NIPAL3Q6P499 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.71■□□□□ 0.43
NIPAL3Q6P499 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NIPAL3Q6P499 AC093503.3-201ENST00000624917 2352 ntBASIC17.71■□□□□ 0.43
NIPAL3Q6P499 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.71■□□□□ 0.43
NIPAL3Q6P499 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
NIPAL3Q6P499 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.71■□□□□ 0.43
NIPAL3Q6P499 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
NIPAL3Q6P499 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.71■□□□□ 0.43
NIPAL3Q6P499 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.71■□□□□ 0.43
NIPAL3Q6P499 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.71■□□□□ 0.43
NIPAL3Q6P499 KRT18P6-201ENST00000555540 1265 ntBASIC17.71■□□□□ 0.43
NIPAL3Q6P499 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.71■□□□□ 0.43
NIPAL3Q6P499 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
NIPAL3Q6P499 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.71■□□□□ 0.43
NIPAL3Q6P499 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NIPAL3Q6P499 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NIPAL3Q6P499 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
NIPAL3Q6P499 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NIPAL3Q6P499 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
NIPAL3Q6P499 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
NIPAL3Q6P499 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms