Protein–RNA interactions for Protein: Q6NUK4

REEP3, Receptor expression-enhancing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3Q6NUK4 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.17■□□□□ 0.5
REEP3Q6NUK4 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.17■□□□□ 0.5
REEP3Q6NUK4 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.17■□□□□ 0.5
REEP3Q6NUK4 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.17■□□□□ 0.5
REEP3Q6NUK4 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.17■□□□□ 0.5
REEP3Q6NUK4 IKBKGP1-201ENST00000612193 1073 ntBASIC18.17■□□□□ 0.5
REEP3Q6NUK4 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
REEP3Q6NUK4 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
REEP3Q6NUK4 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
REEP3Q6NUK4 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.17■□□□□ 0.5
REEP3Q6NUK4 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
REEP3Q6NUK4 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
REEP3Q6NUK4 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
REEP3Q6NUK4 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.17■□□□□ 0.5
REEP3Q6NUK4 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
REEP3Q6NUK4 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
REEP3Q6NUK4 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
REEP3Q6NUK4 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
REEP3Q6NUK4 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
REEP3Q6NUK4 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
REEP3Q6NUK4 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
REEP3Q6NUK4 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
REEP3Q6NUK4 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.16■□□□□ 0.5
REEP3Q6NUK4 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.16■□□□□ 0.5
REEP3Q6NUK4 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.16■□□□□ 0.5
REEP3Q6NUK4 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.16■□□□□ 0.5
REEP3Q6NUK4 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.16■□□□□ 0.5
REEP3Q6NUK4 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.16■□□□□ 0.5
REEP3Q6NUK4 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
REEP3Q6NUK4 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.16■□□□□ 0.5
REEP3Q6NUK4 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.16■□□□□ 0.5
REEP3Q6NUK4 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.16■□□□□ 0.5
REEP3Q6NUK4 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
REEP3Q6NUK4 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
REEP3Q6NUK4 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
REEP3Q6NUK4 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
REEP3Q6NUK4 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.16■□□□□ 0.5
REEP3Q6NUK4 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.16■□□□□ 0.5
REEP3Q6NUK4 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.16■□□□□ 0.5
REEP3Q6NUK4 AC093503.3-201ENST00000624917 2352 ntBASIC18.16■□□□□ 0.5
REEP3Q6NUK4 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.15■□□□□ 0.5
REEP3Q6NUK4 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
REEP3Q6NUK4 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
REEP3Q6NUK4 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
REEP3Q6NUK4 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
REEP3Q6NUK4 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.15■□□□□ 0.5
REEP3Q6NUK4 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.15■□□□□ 0.5
REEP3Q6NUK4 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
REEP3Q6NUK4 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.15■□□□□ 0.5
REEP3Q6NUK4 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.15■□□□□ 0.5
REEP3Q6NUK4 AL137784.2-201ENST00000607332 1000 ntBASIC18.15■□□□□ 0.5
REEP3Q6NUK4 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
REEP3Q6NUK4 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.15■□□□□ 0.5
REEP3Q6NUK4 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
REEP3Q6NUK4 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
REEP3Q6NUK4 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
REEP3Q6NUK4 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
REEP3Q6NUK4 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
REEP3Q6NUK4 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
REEP3Q6NUK4 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
REEP3Q6NUK4 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
REEP3Q6NUK4 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
REEP3Q6NUK4 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
REEP3Q6NUK4 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
REEP3Q6NUK4 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
REEP3Q6NUK4 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
REEP3Q6NUK4 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.14■□□□□ 0.5
REEP3Q6NUK4 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.14■□□□□ 0.5
REEP3Q6NUK4 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
REEP3Q6NUK4 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
REEP3Q6NUK4 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
REEP3Q6NUK4 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
REEP3Q6NUK4 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
REEP3Q6NUK4 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.14■□□□□ 0.49
REEP3Q6NUK4 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
REEP3Q6NUK4 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.14■□□□□ 0.49
REEP3Q6NUK4 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
REEP3Q6NUK4 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.14■□□□□ 0.49
REEP3Q6NUK4 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
REEP3Q6NUK4 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.14■□□□□ 0.49
REEP3Q6NUK4 MIPEPP3-201ENST00000412105 444 ntBASIC18.14■□□□□ 0.49
REEP3Q6NUK4 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
REEP3Q6NUK4 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.14■□□□□ 0.49
REEP3Q6NUK4 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.14■□□□□ 0.49
REEP3Q6NUK4 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
REEP3Q6NUK4 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.14■□□□□ 0.49
REEP3Q6NUK4 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.14■□□□□ 0.49
REEP3Q6NUK4 RAP2CP1-201ENST00000605103 478 ntBASIC18.14■□□□□ 0.49
REEP3Q6NUK4 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.14■□□□□ 0.49
REEP3Q6NUK4 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
REEP3Q6NUK4 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
REEP3Q6NUK4 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
REEP3Q6NUK4 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.14■□□□□ 0.49
REEP3Q6NUK4 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
REEP3Q6NUK4 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.14■□□□□ 0.49
REEP3Q6NUK4 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
REEP3Q6NUK4 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
REEP3Q6NUK4 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
REEP3Q6NUK4 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
REEP3Q6NUK4 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms