Protein–RNA interactions for Protein: Q5VTD9

GFI1B, Zinc finger protein Gfi-1b, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1BQ5VTD9 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC15.23■□□□□ 0.03
GFI1BQ5VTD9 DUX4L2-201ENST00000561772 1275 ntBASIC15.23■□□□□ 0.03
GFI1BQ5VTD9 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC15.23■□□□□ 0.03
GFI1BQ5VTD9 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC15.23■□□□□ 0.03
GFI1BQ5VTD9 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC15.23■□□□□ 0.03
GFI1BQ5VTD9 DUX4L6-201ENST00000626483 1275 ntBASIC15.23■□□□□ 0.03
GFI1BQ5VTD9 DUX4L1-201ENST00000627662 1275 ntBASIC15.23■□□□□ 0.03
GFI1BQ5VTD9 DUX4L8-201ENST00000629013 1275 ntBASIC15.23■□□□□ 0.03
GFI1BQ5VTD9 DUX4L3-201ENST00000630187 1275 ntBASIC15.23■□□□□ 0.03
GFI1BQ5VTD9 DUX4L7-201ENST00000630678 1275 ntBASIC15.23■□□□□ 0.03
GFI1BQ5VTD9 DUX4L5-201ENST00000630834 1275 ntBASIC15.23■□□□□ 0.03
GFI1BQ5VTD9 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GFI1BQ5VTD9 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
GFI1BQ5VTD9 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GFI1BQ5VTD9 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC15.23■□□□□ 0.03
GFI1BQ5VTD9 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GFI1BQ5VTD9 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
GFI1BQ5VTD9 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
GFI1BQ5VTD9 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
GFI1BQ5VTD9 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
GFI1BQ5VTD9 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
GFI1BQ5VTD9 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
GFI1BQ5VTD9 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GFI1BQ5VTD9 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GFI1BQ5VTD9 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GFI1BQ5VTD9 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GFI1BQ5VTD9 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC15.22■□□□□ 0.03
GFI1BQ5VTD9 AC011484.1-201ENST00000377652 1995 ntBASIC15.22■□□□□ 0.03
GFI1BQ5VTD9 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GFI1BQ5VTD9 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GFI1BQ5VTD9 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GFI1BQ5VTD9 AC090340.1-201ENST00000620778 4980 ntBASIC15.22■□□□□ 0.03
GFI1BQ5VTD9 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GFI1BQ5VTD9 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GFI1BQ5VTD9 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
GFI1BQ5VTD9 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC15.22■□□□□ 0.03
GFI1BQ5VTD9 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC15.22■□□□□ 0.03
GFI1BQ5VTD9 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GFI1BQ5VTD9 ZNRF2P3-201ENST00000424200 374 ntBASIC15.22■□□□□ 0.03
GFI1BQ5VTD9 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC15.22■□□□□ 0.03
GFI1BQ5VTD9 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC15.22■□□□□ 0.03
GFI1BQ5VTD9 CCDC92B-201ENST00000575506 885 ntBASIC15.22■□□□□ 0.03
GFI1BQ5VTD9 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC15.22■□□□□ 0.03
GFI1BQ5VTD9 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GFI1BQ5VTD9 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
GFI1BQ5VTD9 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC15.22■□□□□ 0.03
GFI1BQ5VTD9 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC15.22■□□□□ 0.03
GFI1BQ5VTD9 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
GFI1BQ5VTD9 HCG11-201ENST00000411553 5696 ntBASIC15.22■□□□□ 0.03
GFI1BQ5VTD9 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
GFI1BQ5VTD9 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC15.22■□□□□ 0.03
GFI1BQ5VTD9 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.21■□□□□ 0.03
GFI1BQ5VTD9 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
GFI1BQ5VTD9 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GFI1BQ5VTD9 CROCCP3-202ENST00000420820 1947 ntBASIC15.21■□□□□ 0.03
GFI1BQ5VTD9 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GFI1BQ5VTD9 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GFI1BQ5VTD9 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GFI1BQ5VTD9 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GFI1BQ5VTD9 COX20-201ENST00000366528 568 ntTSL 2 BASIC15.21■□□□□ 0.03
GFI1BQ5VTD9 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
GFI1BQ5VTD9 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GFI1BQ5VTD9 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC15.21■□□□□ 0.03
GFI1BQ5VTD9 AC245052.3-201ENST00000450182 901 ntBASIC15.21■□□□□ 0.03
GFI1BQ5VTD9 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC15.21■□□□□ 0.03
GFI1BQ5VTD9 RAB43-208ENST00000615093 783 ntTSL 5 BASIC15.21■□□□□ 0.03
GFI1BQ5VTD9 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC15.21■□□□□ 0.03
GFI1BQ5VTD9 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC15.21■□□□□ 0.03
GFI1BQ5VTD9 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GFI1BQ5VTD9 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
GFI1BQ5VTD9 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC15.21■□□□□ 0.02
GFI1BQ5VTD9 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
GFI1BQ5VTD9 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
GFI1BQ5VTD9 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GFI1BQ5VTD9 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GFI1BQ5VTD9 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GFI1BQ5VTD9 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GFI1BQ5VTD9 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GFI1BQ5VTD9 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
GFI1BQ5VTD9 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.2■□□□□ 0.02
GFI1BQ5VTD9 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
GFI1BQ5VTD9 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GFI1BQ5VTD9 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
GFI1BQ5VTD9 LINC01465-201ENST00000408887 1940 ntBASIC15.2■□□□□ 0.02
GFI1BQ5VTD9 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GFI1BQ5VTD9 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC15.2■□□□□ 0.02
GFI1BQ5VTD9 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC15.2■□□□□ 0.02
GFI1BQ5VTD9 LGR4-203ENST00000480977 492 ntTSL 2 BASIC15.2■□□□□ 0.02
GFI1BQ5VTD9 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GFI1BQ5VTD9 KRT18P14-201ENST00000534205 1250 ntBASIC15.2■□□□□ 0.02
GFI1BQ5VTD9 TESC-206ENST00000541210 936 ntTSL 3 BASIC15.2■□□□□ 0.02
GFI1BQ5VTD9 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC15.2■□□□□ 0.02
GFI1BQ5VTD9 AP001160.3-201ENST00000601484 763 ntBASIC15.2■□□□□ 0.02
GFI1BQ5VTD9 RARRES2P11-201ENST00000635158 484 ntBASIC15.2■□□□□ 0.02
GFI1BQ5VTD9 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GFI1BQ5VTD9 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.2■□□□□ 0.02
GFI1BQ5VTD9 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GFI1BQ5VTD9 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
GFI1BQ5VTD9 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GFI1BQ5VTD9 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms