Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 MED15-215ENST00000444094 551 ntTSL 418.31■□□□□ 0.525e-8■■□□□ 13
SRSF1Q07955 MED15-218ENST00000451058 418 ntTSL 317.97■□□□□ 0.475e-8■■□□□ 13
SRSF1Q07955 MED15-205ENST00000414658 717 ntTSL 317.36■□□□□ 0.375e-8■■□□□ 13
SRSF1Q07955 MED15-216ENST00000445189 596 ntTSL 416.44■□□□□ 0.225e-8■■□□□ 13
SRSF1Q07955 MED15-221ENST00000473028 556 ntTSL 416.44■□□□□ 0.225e-8■■□□□ 13
SRSF1Q07955 MED15-214ENST00000441501 840 ntTSL 316.08■□□□□ 0.165e-8■■□□□ 13
SRSF1Q07955 MED15-217ENST00000445987 590 ntTSL 415.33■□□□□ 0.045e-8■■□□□ 13
SRSF1Q07955 HNRNPU-224ENST00000640056 2045 ntTSL 59.03□□□□□ -0.964e-7■■□□□ 13
SRSF1Q07955 TSC22D4-206ENST00000496728 837 ntTSL 318.34■□□□□ 0.534e-7■■□□□ 13
SRSF1Q07955 TSC22D4-203ENST00000423266 1071 ntTSL 215.64■□□□□ 0.094e-7■■□□□ 13
SRSF1Q07955 MAGI1-205ENST00000464060 2247 ntTSL 1 (best)18.49■□□□□ 0.554e-9■■□□□ 13
SRSF1Q07955 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.174e-9■■□□□ 13
SRSF1Q07955 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.354e-9■■□□□ 13
SRSF1Q07955 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.374e-9■■□□□ 13
SRSF1Q07955 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC12□□□□□ -0.494e-9■■□□□ 13
SRSF1Q07955 KMT2E-214ENST00000495267 1133 ntTSL 1 (best)18.82■□□□□ 0.62e-6■■□□□ 13
SRSF1Q07955 KMT2E-209ENST00000478990 1500 ntTSL 513.67□□□□□ -0.222e-6■■□□□ 13
SRSF1Q07955 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.09■□□□□ 0.495e-6■■□□□ 13
SRSF1Q07955 SUPT4H1-204ENST00000580947 574 ntAPPRIS P1 TSL 4 BASIC10.1□□□□□ -0.795e-6■■□□□ 13
SRSF1Q07955 WDR43-202ENST00000407426 3533 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.883e-17■■□□□ 13
SRSF1Q07955 WDR43-205ENST00000446643 579 ntTSL 49.1□□□□□ -0.953e-17■■□□□ 13
SRSF1Q07955 GPBP1L1-202ENST00000355105 3736 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.034e-6■■□□□ 13
SRSF1Q07955 GPBP1L1-201ENST00000290795 3599 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.364e-6■■□□□ 13
SRSF1Q07955 ASL-210ENST00000496336 996 ntTSL 1 (best)21.53■■□□□ 1.045e-7■■□□□ 13
SRSF1Q07955 PRC1-207ENST00000555745 582 ntTSL 317.29■□□□□ 0.364e-9■■□□□ 13
SRSF1Q07955 PRC1-209ENST00000556129 583 ntTSL 317.06■□□□□ 0.324e-9■■□□□ 13
SRSF1Q07955 PRC1-213ENST00000557905 571 ntTSL 416.26■□□□□ 0.194e-9■■□□□ 13
SRSF1Q07955 PRC1-212ENST00000557763 933 ntTSL 515.39■□□□□ 0.054e-9■■□□□ 13
SRSF1Q07955 PRC1-215ENST00000559811 414 ntTSL 315.35■□□□□ 0.054e-9■■□□□ 13
SRSF1Q07955 PRC1-203ENST00000417173 1215 ntTSL 214.93□□□□□ -0.024e-9■■□□□ 13
SRSF1Q07955 PRC1-205ENST00000553494 717 ntTSL 313.45□□□□□ -0.264e-9■■□□□ 13
SRSF1Q07955 PRC1-208ENST00000555791 660 ntTSL 413.13□□□□□ -0.314e-9■■□□□ 13
SRSF1Q07955 PRC1-218ENST00000560605 576 ntTSL 412.37□□□□□ -0.434e-9■■□□□ 13
SRSF1Q07955 MAN2A2-218ENST00000559999 529 ntTSL 415.04■□□□□ -03e-6■■□□□ 13
SRSF1Q07955 AHNAK-208ENST00000533365 584 ntAPPRIS ALT2 TSL 517.34■□□□□ 0.373e-6■■□□□ 13
SRSF1Q07955 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC13.74□□□□□ -0.213e-6■■□□□ 13
SRSF1Q07955 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.243e-6■■□□□ 13
SRSF1Q07955 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.15□□□□□ -1.753e-6■■□□□ 13
SRSF1Q07955 RHOT2-219ENST00000568950 1343 ntTSL 521.3■■□□□ 12e-7■■□□□ 13
SRSF1Q07955 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.072e-7■■□□□ 13
SRSF1Q07955 RHOT2-222ENST00000569675 2559 ntTSL 213.59□□□□□ -0.232e-7■■□□□ 13
SRSF1Q07955 RHOT2-227ENST00000602564 3695 ntTSL 511.42□□□□□ -0.582e-7■■□□□ 13
SRSF1Q07955 MSH5-209ENST00000450148 1000 ntTSL 511.84□□□□□ -0.511e-6■■□□□ 13
SRSF1Q07955 MBNL1-207ENST00000459747 594 ntTSL 414.31□□□□□ -0.127e-7■■□□□ 12.9
SRSF1Q07955 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC13.7□□□□□ -0.227e-7■■□□□ 12.9
SRSF1Q07955 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC12.96□□□□□ -0.337e-7■■□□□ 12.9
SRSF1Q07955 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.487e-7■■□□□ 12.9
SRSF1Q07955 MBNL1-209ENST00000460591 898 ntTSL 38.43□□□□□ -1.067e-7■■□□□ 12.9
SRSF1Q07955 MBNL1-212ENST00000464596 989 ntTSL 58.18□□□□□ -1.17e-7■■□□□ 12.9
SRSF1Q07955 MBNL1-221ENST00000495875 545 ntTSL 27.43□□□□□ -1.227e-7■■□□□ 12.9
SRSF1Q07955 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC6.74□□□□□ -1.337e-7■■□□□ 12.9
SRSF1Q07955 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC6.59□□□□□ -1.357e-7■■□□□ 12.9
SRSF1Q07955 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC6.42□□□□□ -1.387e-7■■□□□ 12.9
SRSF1Q07955 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.537e-7■■□□□ 12.9
SRSF1Q07955 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.69□□□□□ -1.667e-7■■□□□ 12.9
SRSF1Q07955 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.57□□□□□ -1.847e-7■■□□□ 12.9
SRSF1Q07955 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.49□□□□□ -1.857e-7■■□□□ 12.9
SRSF1Q07955 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.48□□□□□ -1.857e-7■■□□□ 12.9
SRSF1Q07955 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC2.82□□□□□ -1.967e-7■■□□□ 12.9
SRSF1Q07955 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC2.77□□□□□ -1.977e-7■■□□□ 12.9
SRSF1Q07955 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC2.77□□□□□ -1.977e-7■■□□□ 12.9
SRSF1Q07955 DYRK1A-209ENST00000608928 483 ntTSL 520.9■□□□□ 0.942e-7■■□□□ 12.9
SRSF1Q07955 POLI-214ENST00000583136 1204 ntTSL 322.83■■□□□ 1.252e-7■■□□□ 12.9
SRSF1Q07955 TSC2-208ENST00000461648 1071 ntTSL 222.79■■□□□ 1.242e-7■■□□□ 12.9
SRSF1Q07955 SIPA1L1-210ENST00000555652 379 ntTSL 322.24■■□□□ 1.152e-7■■□□□ 12.9
SRSF1Q07955 GMCL1-202ENST00000468386 808 ntTSL 522.16■■□□□ 1.142e-7■■□□□ 12.9
SRSF1Q07955 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.68■■□□□ 1.062e-7■■□□□ 12.9
SRSF1Q07955 FUBP3-203ENST00000467100 2228 ntTSL 219.7■□□□□ 0.742e-7■■□□□ 12.9
SRSF1Q07955 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.42e-7■■□□□ 12.9
SRSF1Q07955 CORO1C-219ENST00000552871 587 ntTSL 317.33■□□□□ 0.362e-7■■□□□ 12.9
SRSF1Q07955 CORO1C-214ENST00000550542 1245 ntTSL 517.33■□□□□ 0.362e-7■■□□□ 12.9
SRSF1Q07955 CORO1C-216ENST00000551059 474 ntTSL 217.31■□□□□ 0.362e-7■■□□□ 12.9
SRSF1Q07955 SIPA1L1-204ENST00000553453 521 ntTSL 516.94■□□□□ 0.32e-7■■□□□ 12.9
SRSF1Q07955 CORO1C-210ENST00000549384 891 ntTSL 516.74■□□□□ 0.272e-7■■□□□ 12.9
SRSF1Q07955 SIPA1L1-212ENST00000555989 569 ntTSL 416.64■□□□□ 0.252e-7■■□□□ 12.9
SRSF1Q07955 TSC2-205ENST00000432909 374 ntTSL 316.55■□□□□ 0.242e-7■■□□□ 12.9
SRSF1Q07955 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.232e-7■■□□□ 12.9
SRSF1Q07955 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC16.14■□□□□ 0.182e-7■■□□□ 12.9
SRSF1Q07955 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC16.04■□□□□ 0.162e-7■■□□□ 12.9
SRSF1Q07955 JMJD1C-211ENST00000633035 499 ntTSL 315.42■□□□□ 0.062e-7■■□□□ 12.9
SRSF1Q07955 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.052e-7■■□□□ 12.9
SRSF1Q07955 POLI-202ENST00000406285 2030 ntTSL 2 BASIC15.22■□□□□ 0.032e-7■■□□□ 12.9
SRSF1Q07955 SIPA1L1-214ENST00000556780 591 ntTSL 515.21■□□□□ 0.032e-7■■□□□ 12.9
SRSF1Q07955 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.172e-7■■□□□ 12.9
SRSF1Q07955 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.182e-7■■□□□ 12.9
SRSF1Q07955 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.22e-7■■□□□ 12.9
SRSF1Q07955 POLI-206ENST00000577971 2536 ntTSL 213.79□□□□□ -0.22e-7■■□□□ 12.9
SRSF1Q07955 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC13.74□□□□□ -0.212e-7■■□□□ 12.9
SRSF1Q07955 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.242e-7■■□□□ 12.9
SRSF1Q07955 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.252e-7■■□□□ 12.9
SRSF1Q07955 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.292e-7■■□□□ 12.9
SRSF1Q07955 RABEPK-205ENST00000416065 733 ntTSL 313.21□□□□□ -0.292e-7■■□□□ 12.9
SRSF1Q07955 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.322e-7■■□□□ 12.9
SRSF1Q07955 GTF3C3-206ENST00000448539 796 ntTSL 312.77□□□□□ -0.372e-7■■□□□ 12.9
SRSF1Q07955 TSC2-206ENST00000439117 5073 ntTSL 1 (best)12.49□□□□□ -0.412e-7■■□□□ 12.9
SRSF1Q07955 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.412e-7■■□□□ 12.9
SRSF1Q07955 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.452e-7■■□□□ 12.9
SRSF1Q07955 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.642e-7■■□□□ 12.9
SRSF1Q07955 POLI-204ENST00000577612 585 ntTSL 310.81□□□□□ -0.682e-7■■□□□ 12.9
SRSF1Q07955 SIPA1L1-213ENST00000556408 903 ntTSL 310.26□□□□□ -0.772e-7■■□□□ 12.9
Retrieved 100 of 14,836 protein–RNA pairs in 115.1 ms