Protein–RNA interactions for Protein: Q02985

CFHR3, Complement factor H-related protein 3, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3Q02985 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CFHR3Q02985 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
CFHR3Q02985 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CFHR3Q02985 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CFHR3Q02985 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CFHR3Q02985 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CFHR3Q02985 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CFHR3Q02985 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC15.26■□□□□ 0.03
CFHR3Q02985 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CFHR3Q02985 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CFHR3Q02985 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CFHR3Q02985 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CFHR3Q02985 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
CFHR3Q02985 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CFHR3Q02985 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CFHR3Q02985 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC15.26■□□□□ 0.03
CFHR3Q02985 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC15.26■□□□□ 0.03
CFHR3Q02985 PENK-204ENST00000518770 863 ntTSL 2 BASIC15.26■□□□□ 0.03
CFHR3Q02985 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC15.26■□□□□ 0.03
CFHR3Q02985 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CFHR3Q02985 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
CFHR3Q02985 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC15.26■□□□□ 0.03
CFHR3Q02985 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CFHR3Q02985 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CFHR3Q02985 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CFHR3Q02985 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CFHR3Q02985 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CFHR3Q02985 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CFHR3Q02985 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CFHR3Q02985 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
CFHR3Q02985 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CFHR3Q02985 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CFHR3Q02985 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CFHR3Q02985 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC15.25■□□□□ 0.03
CFHR3Q02985 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC15.25■□□□□ 0.03
CFHR3Q02985 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CFHR3Q02985 SRI-203ENST00000419179 1307 ntTSL 2 BASIC15.25■□□□□ 0.03
CFHR3Q02985 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CFHR3Q02985 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC15.25■□□□□ 0.03
CFHR3Q02985 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC15.25■□□□□ 0.03
CFHR3Q02985 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CFHR3Q02985 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CFHR3Q02985 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CFHR3Q02985 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CFHR3Q02985 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
CFHR3Q02985 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC15.25■□□□□ 0.03
CFHR3Q02985 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC15.25■□□□□ 0.03
CFHR3Q02985 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC15.25■□□□□ 0.03
CFHR3Q02985 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC15.25■□□□□ 0.03
CFHR3Q02985 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC15.25■□□□□ 0.03
CFHR3Q02985 CD177P1-201ENST00000606252 935 ntBASIC15.25■□□□□ 0.03
CFHR3Q02985 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC15.25■□□□□ 0.03
CFHR3Q02985 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC15.25■□□□□ 0.03
CFHR3Q02985 HLA-A-209ENST00000638375 975 ntBASIC15.25■□□□□ 0.03
CFHR3Q02985 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CFHR3Q02985 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CFHR3Q02985 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CFHR3Q02985 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC15.25■□□□□ 0.03
CFHR3Q02985 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC15.25■□□□□ 0.03
CFHR3Q02985 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CFHR3Q02985 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CFHR3Q02985 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CFHR3Q02985 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CFHR3Q02985 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CFHR3Q02985 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
CFHR3Q02985 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC15.25■□□□□ 0.03
CFHR3Q02985 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CFHR3Q02985 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CFHR3Q02985 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CFHR3Q02985 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
CFHR3Q02985 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CFHR3Q02985 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CFHR3Q02985 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CFHR3Q02985 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CFHR3Q02985 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CFHR3Q02985 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CFHR3Q02985 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CFHR3Q02985 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
CFHR3Q02985 FAM197Y1-201ENST00000421178 764 ntBASIC15.24■□□□□ 0.03
CFHR3Q02985 TSPY7P-201ENST00000431358 1114 ntBASIC15.24■□□□□ 0.03
CFHR3Q02985 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CFHR3Q02985 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC15.24■□□□□ 0.03
CFHR3Q02985 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CFHR3Q02985 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC15.24■□□□□ 0.03
CFHR3Q02985 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC15.24■□□□□ 0.03
CFHR3Q02985 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC15.24■□□□□ 0.03
CFHR3Q02985 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC15.24■□□□□ 0.03
CFHR3Q02985 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
CFHR3Q02985 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC15.24■□□□□ 0.03
CFHR3Q02985 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC15.24■□□□□ 0.03
CFHR3Q02985 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CFHR3Q02985 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CFHR3Q02985 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CFHR3Q02985 KRT16P1-201ENST00000399124 1418 ntBASIC15.24■□□□□ 0.03
CFHR3Q02985 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CFHR3Q02985 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC15.24■□□□□ 0.03
CFHR3Q02985 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CFHR3Q02985 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CFHR3Q02985 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CFHR3Q02985 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms