Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NR1H2P55055 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
NR1H2P55055 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.43■□□□□ 0.54
NR1H2P55055 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NR1H2P55055 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
NR1H2P55055 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NR1H2P55055 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NR1H2P55055 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NR1H2P55055 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NR1H2P55055 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
NR1H2P55055 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
NR1H2P55055 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
NR1H2P55055 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.43■□□□□ 0.54
NR1H2P55055 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.43■□□□□ 0.54
NR1H2P55055 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NR1H2P55055 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NR1H2P55055 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NR1H2P55055 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
NR1H2P55055 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.43■□□□□ 0.54
NR1H2P55055 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.43■□□□□ 0.54
NR1H2P55055 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.43■□□□□ 0.54
NR1H2P55055 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.42■□□□□ 0.54
NR1H2P55055 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.42■□□□□ 0.54
NR1H2P55055 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NR1H2P55055 EEF1DP3-203ENST00000566025 782 ntBASIC18.42■□□□□ 0.54
NR1H2P55055 SLC7A5P1-201ENST00000568957 537 ntBASIC18.42■□□□□ 0.54
NR1H2P55055 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.42■□□□□ 0.54
NR1H2P55055 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NR1H2P55055 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
NR1H2P55055 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NR1H2P55055 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NR1H2P55055 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.41■□□□□ 0.54
NR1H2P55055 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NR1H2P55055 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
NR1H2P55055 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NR1H2P55055 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NR1H2P55055 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
NR1H2P55055 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.41■□□□□ 0.54
NR1H2P55055 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NR1H2P55055 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NR1H2P55055 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NR1H2P55055 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NR1H2P55055 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NR1H2P55055 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.41■□□□□ 0.54
NR1H2P55055 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.41■□□□□ 0.54
NR1H2P55055 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
NR1H2P55055 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NR1H2P55055 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.41■□□□□ 0.54
NR1H2P55055 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NR1H2P55055 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.41■□□□□ 0.54
NR1H2P55055 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
NR1H2P55055 AC010536.3-201ENST00000620306 533 ntBASIC18.41■□□□□ 0.54
NR1H2P55055 AC120498.10-201ENST00000621827 505 ntBASIC18.41■□□□□ 0.54
NR1H2P55055 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NR1H2P55055 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NR1H2P55055 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NR1H2P55055 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NR1H2P55055 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.41■□□□□ 0.54
NR1H2P55055 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NR1H2P55055 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.41■□□□□ 0.54
NR1H2P55055 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
NR1H2P55055 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NR1H2P55055 NOC2LP2-201ENST00000407594 1944 ntBASIC18.41■□□□□ 0.54
NR1H2P55055 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NR1H2P55055 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
NR1H2P55055 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NR1H2P55055 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
NR1H2P55055 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.4■□□□□ 0.54
NR1H2P55055 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
NR1H2P55055 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.4■□□□□ 0.54
NR1H2P55055 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
NR1H2P55055 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
NR1H2P55055 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
NR1H2P55055 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NR1H2P55055 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
NR1H2P55055 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.4■□□□□ 0.54
NR1H2P55055 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
NR1H2P55055 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NR1H2P55055 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NR1H2P55055 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.4■□□□□ 0.54
NR1H2P55055 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.4■□□□□ 0.54
NR1H2P55055 AC013268.1-206ENST00000638368 961 ntBASIC18.4■□□□□ 0.54
NR1H2P55055 AC112229.1-201ENST00000639295 961 ntBASIC18.4■□□□□ 0.54
NR1H2P55055 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.4■□□□□ 0.54
NR1H2P55055 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NR1H2P55055 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NR1H2P55055 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NR1H2P55055 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NR1H2P55055 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NR1H2P55055 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
NR1H2P55055 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NR1H2P55055 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NR1H2P55055 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.4■□□□□ 0.54
NR1H2P55055 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
NR1H2P55055 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
NR1H2P55055 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.39■□□□□ 0.54
NR1H2P55055 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
NR1H2P55055 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.39■□□□□ 0.54
NR1H2P55055 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
NR1H2P55055 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms