Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
RNF144AP50876 AC093484.2-201ENST00000580996 2166 ntBASIC18.1■□□□□ 0.49
RNF144AP50876 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
RNF144AP50876 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF144AP50876 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
RNF144AP50876 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF144AP50876 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.09■□□□□ 0.49
RNF144AP50876 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
RNF144AP50876 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.09■□□□□ 0.49
RNF144AP50876 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.09■□□□□ 0.49
RNF144AP50876 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF144AP50876 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
RNF144AP50876 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF144AP50876 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF144AP50876 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
RNF144AP50876 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
RNF144AP50876 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.09■□□□□ 0.49
RNF144AP50876 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RNF144AP50876 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
RNF144AP50876 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.09■□□□□ 0.49
RNF144AP50876 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.09■□□□□ 0.49
RNF144AP50876 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF144AP50876 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF144AP50876 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RNF144AP50876 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
RNF144AP50876 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF144AP50876 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
RNF144AP50876 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.09■□□□□ 0.49
RNF144AP50876 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.09■□□□□ 0.49
RNF144AP50876 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
RNF144AP50876 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RNF144AP50876 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RNF144AP50876 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.09■□□□□ 0.49
RNF144AP50876 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF144AP50876 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RNF144AP50876 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.09■□□□□ 0.49
RNF144AP50876 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
RNF144AP50876 KRT18P6-201ENST00000555540 1265 ntBASIC18.09■□□□□ 0.49
RNF144AP50876 AC233263.1-201ENST00000578059 224 ntBASIC18.09■□□□□ 0.49
RNF144AP50876 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.09■□□□□ 0.49
RNF144AP50876 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF144AP50876 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF144AP50876 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
RNF144AP50876 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RNF144AP50876 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF144AP50876 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF144AP50876 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF144AP50876 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.09■□□□□ 0.49
RNF144AP50876 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF144AP50876 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RNF144AP50876 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF144AP50876 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
RNF144AP50876 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RNF144AP50876 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.49
RNF144AP50876 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RNF144AP50876 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RNF144AP50876 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
RNF144AP50876 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.08■□□□□ 0.49
RNF144AP50876 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RNF144AP50876 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.08■□□□□ 0.49
RNF144AP50876 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
RNF144AP50876 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.08■□□□□ 0.48
RNF144AP50876 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
RNF144AP50876 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RNF144AP50876 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
RNF144AP50876 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.08■□□□□ 0.48
RNF144AP50876 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RNF144AP50876 AC008687.6-201ENST00000596318 630 ntBASIC18.08■□□□□ 0.48
RNF144AP50876 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RNF144AP50876 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RNF144AP50876 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RNF144AP50876 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RNF144AP50876 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RNF144AP50876 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RNF144AP50876 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RNF144AP50876 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
RNF144AP50876 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RNF144AP50876 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RNF144AP50876 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RNF144AP50876 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF144AP50876 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
RNF144AP50876 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF144AP50876 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
RNF144AP50876 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF144AP50876 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.07■□□□□ 0.48
RNF144AP50876 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.07■□□□□ 0.48
RNF144AP50876 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF144AP50876 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF144AP50876 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RNF144AP50876 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF144AP50876 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
RNF144AP50876 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RNF144AP50876 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RNF144AP50876 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF144AP50876 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF144AP50876 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF144AP50876 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF144AP50876 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF144AP50876 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.07■□□□□ 0.48
RNF144AP50876 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms