Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
CCNFP41002 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCNFP41002 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCNFP41002 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCNFP41002 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
CCNFP41002 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCNFP41002 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCNFP41002 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCNFP41002 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCNFP41002 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCNFP41002 AL138781.2-201ENST00000617896 1843 ntBASIC19.61■□□□□ 0.73
CCNFP41002 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCNFP41002 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCNFP41002 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.61■□□□□ 0.73
CCNFP41002 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCNFP41002 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.61■□□□□ 0.73
CCNFP41002 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.61■□□□□ 0.73
CCNFP41002 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
CCNFP41002 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.61■□□□□ 0.73
CCNFP41002 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCNFP41002 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCNFP41002 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCNFP41002 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCNFP41002 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCNFP41002 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCNFP41002 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCNFP41002 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
CCNFP41002 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCNFP41002 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.61■□□□□ 0.73
CCNFP41002 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCNFP41002 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.6■□□□□ 0.73
CCNFP41002 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.6■□□□□ 0.73
CCNFP41002 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCNFP41002 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCNFP41002 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCNFP41002 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCNFP41002 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCNFP41002 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCNFP41002 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CCNFP41002 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCNFP41002 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CCNFP41002 AC023632.3-201ENST00000521633 145 ntBASIC19.6■□□□□ 0.73
CCNFP41002 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.6■□□□□ 0.73
CCNFP41002 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.6■□□□□ 0.73
CCNFP41002 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.6■□□□□ 0.73
CCNFP41002 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.6■□□□□ 0.73
CCNFP41002 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.6■□□□□ 0.73
CCNFP41002 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.6■□□□□ 0.73
CCNFP41002 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CCNFP41002 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCNFP41002 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCNFP41002 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCNFP41002 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCNFP41002 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCNFP41002 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCNFP41002 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCNFP41002 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCNFP41002 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CCNFP41002 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.59■□□□□ 0.73
CCNFP41002 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.59■□□□□ 0.73
CCNFP41002 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCNFP41002 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCNFP41002 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCNFP41002 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.59■□□□□ 0.73
CCNFP41002 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.59■□□□□ 0.73
CCNFP41002 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.59■□□□□ 0.73
CCNFP41002 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCNFP41002 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCNFP41002 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.59■□□□□ 0.73
CCNFP41002 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCNFP41002 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.59■□□□□ 0.73
CCNFP41002 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCNFP41002 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
CCNFP41002 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CCNFP41002 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCNFP41002 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCNFP41002 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCNFP41002 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.58■□□□□ 0.72
CCNFP41002 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCNFP41002 HLA-G-202ENST00000376815 851 ntBASIC19.58■□□□□ 0.72
CCNFP41002 HLA-G-203ENST00000376818 1127 ntBASIC19.58■□□□□ 0.72
CCNFP41002 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.58■□□□□ 0.72
CCNFP41002 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.58■□□□□ 0.72
CCNFP41002 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.58■□□□□ 0.72
CCNFP41002 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCNFP41002 AC098934.4-201ENST00000564127 592 ntBASIC19.58■□□□□ 0.72
CCNFP41002 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.58■□□□□ 0.72
CCNFP41002 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
CCNFP41002 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCNFP41002 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.72
CCNFP41002 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.58■□□□□ 0.72
CCNFP41002 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCNFP41002 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.58■□□□□ 0.72
CCNFP41002 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
CCNFP41002 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
CCNFP41002 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.58■□□□□ 0.72
CCNFP41002 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCNFP41002 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.57■□□□□ 0.72
CCNFP41002 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCNFP41002 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms