Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.2■□□□□ 0.98
USP8P40818 AC083880.1-201ENST00000608266 535 ntBASIC21.2■□□□□ 0.98
USP8P40818 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP8P40818 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.2■□□□□ 0.98
USP8P40818 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP8P40818 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.2■□□□□ 0.98
USP8P40818 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP8P40818 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP8P40818 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
USP8P40818 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP8P40818 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP8P40818 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.2■□□□□ 0.98
USP8P40818 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.2■□□□□ 0.98
USP8P40818 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.19■□□□□ 0.98
USP8P40818 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC21.19■□□□□ 0.98
USP8P40818 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP8P40818 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC21.19■□□□□ 0.98
USP8P40818 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP8P40818 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP8P40818 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.19■□□□□ 0.98
USP8P40818 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.19■□□□□ 0.98
USP8P40818 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.19■□□□□ 0.98
USP8P40818 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
USP8P40818 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP8P40818 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP8P40818 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP8P40818 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.19■□□□□ 0.98
USP8P40818 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC21.19■□□□□ 0.98
USP8P40818 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
USP8P40818 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
USP8P40818 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP8P40818 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC21.19■□□□□ 0.98
USP8P40818 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP8P40818 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
USP8P40818 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
USP8P40818 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
USP8P40818 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
USP8P40818 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
USP8P40818 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
USP8P40818 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
USP8P40818 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
USP8P40818 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.18■□□□□ 0.98
USP8P40818 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.18■□□□□ 0.98
USP8P40818 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
USP8P40818 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
USP8P40818 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
USP8P40818 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
USP8P40818 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
USP8P40818 AC018553.1-201ENST00000616682 1458 ntBASIC21.18■□□□□ 0.98
USP8P40818 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
USP8P40818 HCG11-201ENST00000411553 5696 ntBASIC21.18■□□□□ 0.98
USP8P40818 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
USP8P40818 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
USP8P40818 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
USP8P40818 AC124283.5-201ENST00000624661 1809 ntBASIC21.18■□□□□ 0.98
USP8P40818 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
USP8P40818 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
USP8P40818 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
USP8P40818 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
USP8P40818 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC21.17■□□□□ 0.98
USP8P40818 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
USP8P40818 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
USP8P40818 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
USP8P40818 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.17■□□□□ 0.98
USP8P40818 HLA-B-256ENST00000639848 1089 ntBASIC21.17■□□□□ 0.98
USP8P40818 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
USP8P40818 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.17■□□□□ 0.98
USP8P40818 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
USP8P40818 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
USP8P40818 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
USP8P40818 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
USP8P40818 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP8P40818 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
USP8P40818 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP8P40818 AC116562.4-201ENST00000641316 2276 ntBASIC21.16■□□□□ 0.98
USP8P40818 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.16■□□□□ 0.98
USP8P40818 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP8P40818 TREX1-205ENST00000625293 1783 ntBASIC21.16■□□□□ 0.98
USP8P40818 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP8P40818 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.16■□□□□ 0.98
USP8P40818 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC21.16■□□□□ 0.98
USP8P40818 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
USP8P40818 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
USP8P40818 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
USP8P40818 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.16■□□□□ 0.98
USP8P40818 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.16■□□□□ 0.98
USP8P40818 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP8P40818 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.16■□□□□ 0.98
USP8P40818 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.16■□□□□ 0.98
USP8P40818 AC142086.2-201ENST00000569753 217 ntBASIC21.16■□□□□ 0.98
USP8P40818 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
USP8P40818 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP8P40818 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP8P40818 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
USP8P40818 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP8P40818 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.15■□□□□ 0.98
USP8P40818 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
USP8P40818 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
USP8P40818 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
USP8P40818 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms