Protein–RNA interactions for Protein: P39023

RPL3, 60S ribosomal protein L3, humanhuman

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3P39023 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPL3P39023 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RPL3P39023 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.51■□□□□ 0.55
RPL3P39023 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
RPL3P39023 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RPL3P39023 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RPL3P39023 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RPL3P39023 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RPL3P39023 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
RPL3P39023 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RPL3P39023 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RPL3P39023 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RPL3P39023 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RPL3P39023 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RPL3P39023 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
RPL3P39023 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RPL3P39023 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RPL3P39023 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
RPL3P39023 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.5■□□□□ 0.55
RPL3P39023 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.5■□□□□ 0.55
RPL3P39023 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
RPL3P39023 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.5■□□□□ 0.55
RPL3P39023 AC060766.5-201ENST00000590539 871 ntBASIC18.5■□□□□ 0.55
RPL3P39023 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.5■□□□□ 0.55
RPL3P39023 MYC-209ENST00000641252 345 ntBASIC18.5■□□□□ 0.55
RPL3P39023 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RPL3P39023 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
RPL3P39023 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.5■□□□□ 0.55
RPL3P39023 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
RPL3P39023 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RPL3P39023 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.5■□□□□ 0.55
RPL3P39023 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RPL3P39023 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RPL3P39023 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
RPL3P39023 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
RPL3P39023 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
RPL3P39023 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPL3P39023 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPL3P39023 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
RPL3P39023 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
RPL3P39023 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.49■□□□□ 0.55
RPL3P39023 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.49■□□□□ 0.55
RPL3P39023 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.49■□□□□ 0.55
RPL3P39023 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RPL3P39023 YBX1P10-201ENST00000444752 975 ntBASIC18.49■□□□□ 0.55
RPL3P39023 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.49■□□□□ 0.55
RPL3P39023 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.49■□□□□ 0.55
RPL3P39023 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPL3P39023 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RPL3P39023 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.49■□□□□ 0.55
RPL3P39023 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RPL3P39023 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.49■□□□□ 0.55
RPL3P39023 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPL3P39023 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RPL3P39023 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RPL3P39023 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.49■□□□□ 0.55
RPL3P39023 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPL3P39023 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPL3P39023 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
RPL3P39023 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.49■□□□□ 0.55
RPL3P39023 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.49■□□□□ 0.55
RPL3P39023 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPL3P39023 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
RPL3P39023 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.49■□□□□ 0.55
RPL3P39023 AP006587.1-201ENST00000534129 1502 ntBASIC18.49■□□□□ 0.55
RPL3P39023 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
RPL3P39023 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPL3P39023 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
RPL3P39023 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPL3P39023 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.48■□□□□ 0.55
RPL3P39023 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RPL3P39023 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.48■□□□□ 0.55
RPL3P39023 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPL3P39023 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPL3P39023 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPL3P39023 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPL3P39023 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPL3P39023 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.48■□□□□ 0.55
RPL3P39023 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.48■□□□□ 0.55
RPL3P39023 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.48■□□□□ 0.55
RPL3P39023 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.48■□□□□ 0.55
RPL3P39023 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.48■□□□□ 0.55
RPL3P39023 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPL3P39023 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.48■□□□□ 0.55
RPL3P39023 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPL3P39023 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
RPL3P39023 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPL3P39023 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPL3P39023 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPL3P39023 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
RPL3P39023 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPL3P39023 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.48■□□□□ 0.55
RPL3P39023 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPL3P39023 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
RPL3P39023 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPL3P39023 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPL3P39023 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPL3P39023 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPL3P39023 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
RPL3P39023 LINC01465-201ENST00000408887 1940 ntBASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms