Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CKS2P33552 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CKS2P33552 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CKS2P33552 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC14.35□□□□□ -0.11
CKS2P33552 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CKS2P33552 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC14.35□□□□□ -0.11
CKS2P33552 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CKS2P33552 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CKS2P33552 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CKS2P33552 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CKS2P33552 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CKS2P33552 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CKS2P33552 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC14.35□□□□□ -0.11
CKS2P33552 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC14.35□□□□□ -0.11
CKS2P33552 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CKS2P33552 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CKS2P33552 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CKS2P33552 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC14.34□□□□□ -0.11
CKS2P33552 AC009113.1-201ENST00000570267 2443 ntBASIC14.34□□□□□ -0.11
CKS2P33552 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CKS2P33552 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CKS2P33552 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CKS2P33552 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC14.34□□□□□ -0.11
CKS2P33552 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CKS2P33552 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC14.34□□□□□ -0.11
CKS2P33552 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC14.34□□□□□ -0.11
CKS2P33552 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
CKS2P33552 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CKS2P33552 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CKS2P33552 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC14.34□□□□□ -0.11
CKS2P33552 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CKS2P33552 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CKS2P33552 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC14.34□□□□□ -0.11
CKS2P33552 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC14.34□□□□□ -0.11
CKS2P33552 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CKS2P33552 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC14.34□□□□□ -0.11
CKS2P33552 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CKS2P33552 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CKS2P33552 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CKS2P33552 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CKS2P33552 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CKS2P33552 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC14.33□□□□□ -0.11
CKS2P33552 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CKS2P33552 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC14.33□□□□□ -0.11
CKS2P33552 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
CKS2P33552 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CKS2P33552 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CKS2P33552 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC14.33□□□□□ -0.11
CKS2P33552 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC14.33□□□□□ -0.11
CKS2P33552 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CKS2P33552 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CKS2P33552 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CKS2P33552 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CKS2P33552 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CKS2P33552 AC135050.7-201ENST00000624508 2218 ntBASIC14.33□□□□□ -0.12
CKS2P33552 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CKS2P33552 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CKS2P33552 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CKS2P33552 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CKS2P33552 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC14.33□□□□□ -0.12
CKS2P33552 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC14.33□□□□□ -0.12
CKS2P33552 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC14.33□□□□□ -0.12
CKS2P33552 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CKS2P33552 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CKS2P33552 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CKS2P33552 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CKS2P33552 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC14.33□□□□□ -0.12
CKS2P33552 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CKS2P33552 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC14.33□□□□□ -0.12
CKS2P33552 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC14.33□□□□□ -0.12
CKS2P33552 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CKS2P33552 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CKS2P33552 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CKS2P33552 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CKS2P33552 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CKS2P33552 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CKS2P33552 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CKS2P33552 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CKS2P33552 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CKS2P33552 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC14.32□□□□□ -0.12
CKS2P33552 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC14.32□□□□□ -0.12
CKS2P33552 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CKS2P33552 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CKS2P33552 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CKS2P33552 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC14.32□□□□□ -0.12
CKS2P33552 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC14.32□□□□□ -0.12
CKS2P33552 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CKS2P33552 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC14.32□□□□□ -0.12
CKS2P33552 AC007322.3-201ENST00000426526 701 ntBASIC14.32□□□□□ -0.12
CKS2P33552 MIR4767-201ENST00000582827 78 ntBASIC14.32□□□□□ -0.12
CKS2P33552 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CKS2P33552 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC14.32□□□□□ -0.12
CKS2P33552 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC14.32□□□□□ -0.12
CKS2P33552 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
CKS2P33552 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC14.32□□□□□ -0.12
CKS2P33552 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC14.32□□□□□ -0.12
CKS2P33552 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC14.32□□□□□ -0.12
CKS2P33552 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CKS2P33552 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CKS2P33552 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms