Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
SHC1P29353 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
SHC1P29353 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SHC1P29353 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SHC1P29353 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SHC1P29353 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SHC1P29353 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.86■□□□□ 0.45
SHC1P29353 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SHC1P29353 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.86■□□□□ 0.45
SHC1P29353 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SHC1P29353 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.86■□□□□ 0.45
SHC1P29353 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.86■□□□□ 0.45
SHC1P29353 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.86■□□□□ 0.45
SHC1P29353 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.86■□□□□ 0.45
SHC1P29353 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SHC1P29353 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SHC1P29353 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SHC1P29353 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.86■□□□□ 0.45
SHC1P29353 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SHC1P29353 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SHC1P29353 AC004408.2-201ENST00000623613 2777 ntBASIC17.85■□□□□ 0.45
SHC1P29353 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
SHC1P29353 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SHC1P29353 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SHC1P29353 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
SHC1P29353 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SHC1P29353 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
SHC1P29353 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.85■□□□□ 0.45
SHC1P29353 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SHC1P29353 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
SHC1P29353 KRT17P3-201ENST00000420566 1262 ntBASIC17.85■□□□□ 0.45
SHC1P29353 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SHC1P29353 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.85■□□□□ 0.45
SHC1P29353 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
SHC1P29353 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.85■□□□□ 0.45
SHC1P29353 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
SHC1P29353 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.85■□□□□ 0.45
SHC1P29353 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
SHC1P29353 ITM2C-210ENST00000620962 501 ntBASIC17.85■□□□□ 0.45
SHC1P29353 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
SHC1P29353 PHGDH-210ENST00000641115 1638 ntBASIC17.85■□□□□ 0.45
SHC1P29353 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
SHC1P29353 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHC1P29353 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.84■□□□□ 0.45
SHC1P29353 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHC1P29353 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHC1P29353 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHC1P29353 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHC1P29353 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHC1P29353 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SHC1P29353 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHC1P29353 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.84■□□□□ 0.45
SHC1P29353 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.84■□□□□ 0.45
SHC1P29353 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.84■□□□□ 0.45
SHC1P29353 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SHC1P29353 PRORSD1P-201ENST00000295112 541 ntBASIC17.84■□□□□ 0.45
SHC1P29353 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.84■□□□□ 0.45
SHC1P29353 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.84■□□□□ 0.45
SHC1P29353 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.84■□□□□ 0.45
SHC1P29353 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.84■□□□□ 0.45
SHC1P29353 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.84■□□□□ 0.45
SHC1P29353 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHC1P29353 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHC1P29353 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHC1P29353 TNXA-203ENST00000507684 2038 ntBASIC17.84■□□□□ 0.45
SHC1P29353 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SHC1P29353 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.84■□□□□ 0.45
SHC1P29353 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHC1P29353 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SHC1P29353 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SHC1P29353 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SHC1P29353 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
SHC1P29353 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SHC1P29353 AC018553.1-201ENST00000616682 1458 ntBASIC17.83■□□□□ 0.45
SHC1P29353 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
SHC1P29353 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SHC1P29353 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SHC1P29353 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SHC1P29353 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SHC1P29353 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SHC1P29353 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SHC1P29353 KRT18P29-201ENST00000397031 1267 ntBASIC17.83■□□□□ 0.44
SHC1P29353 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
SHC1P29353 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.83■□□□□ 0.44
SHC1P29353 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
SHC1P29353 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
SHC1P29353 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
SHC1P29353 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SHC1P29353 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SHC1P29353 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SHC1P29353 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
SHC1P29353 AC116351.2-201ENST00000606540 1585 ntBASIC17.83■□□□□ 0.44
SHC1P29353 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.82■□□□□ 0.44
SHC1P29353 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.82■□□□□ 0.44
SHC1P29353 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
SHC1P29353 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SHC1P29353 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SHC1P29353 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SHC1P29353 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SHC1P29353 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms