Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.51■□□□□ 0.55
PTPN6P29350 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTPN6P29350 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTPN6P29350 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PTPN6P29350 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTPN6P29350 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PTPN6P29350 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
PTPN6P29350 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.51■□□□□ 0.55
PTPN6P29350 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN6P29350 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
PTPN6P29350 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.5■□□□□ 0.55
PTPN6P29350 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN6P29350 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN6P29350 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN6P29350 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.5■□□□□ 0.55
PTPN6P29350 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN6P29350 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN6P29350 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.5■□□□□ 0.55
PTPN6P29350 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN6P29350 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN6P29350 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.5■□□□□ 0.55
PTPN6P29350 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN6P29350 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.5■□□□□ 0.55
PTPN6P29350 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.5■□□□□ 0.55
PTPN6P29350 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN6P29350 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN6P29350 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
PTPN6P29350 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN6P29350 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN6P29350 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
PTPN6P29350 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN6P29350 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN6P29350 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN6P29350 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN6P29350 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN6P29350 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
PTPN6P29350 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTPN6P29350 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.49■□□□□ 0.55
PTPN6P29350 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.49■□□□□ 0.55
PTPN6P29350 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTPN6P29350 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
PTPN6P29350 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.49■□□□□ 0.55
PTPN6P29350 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
PTPN6P29350 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTPN6P29350 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTPN6P29350 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTPN6P29350 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PTPN6P29350 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
PTPN6P29350 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.49■□□□□ 0.55
PTPN6P29350 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTPN6P29350 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.49■□□□□ 0.55
PTPN6P29350 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.49■□□□□ 0.55
PTPN6P29350 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTPN6P29350 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.49■□□□□ 0.55
PTPN6P29350 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
PTPN6P29350 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTPN6P29350 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTPN6P29350 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTPN6P29350 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTPN6P29350 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.48■□□□□ 0.55
PTPN6P29350 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
PTPN6P29350 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.48■□□□□ 0.55
PTPN6P29350 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PTPN6P29350 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTPN6P29350 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTPN6P29350 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.48■□□□□ 0.55
PTPN6P29350 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.48■□□□□ 0.55
PTPN6P29350 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.48■□□□□ 0.55
PTPN6P29350 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.48■□□□□ 0.55
PTPN6P29350 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.48■□□□□ 0.55
PTPN6P29350 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.48■□□□□ 0.55
PTPN6P29350 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PTPN6P29350 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PTPN6P29350 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.48■□□□□ 0.55
PTPN6P29350 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PTPN6P29350 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTPN6P29350 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PTPN6P29350 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.48■□□□□ 0.55
PTPN6P29350 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.48■□□□□ 0.55
PTPN6P29350 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.48■□□□□ 0.55
PTPN6P29350 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PTPN6P29350 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.48■□□□□ 0.55
PTPN6P29350 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTPN6P29350 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.47■□□□□ 0.55
PTPN6P29350 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
PTPN6P29350 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
PTPN6P29350 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTPN6P29350 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTPN6P29350 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
PTPN6P29350 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
PTPN6P29350 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.47■□□□□ 0.55
PTPN6P29350 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.47■□□□□ 0.55
PTPN6P29350 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.47■□□□□ 0.55
PTPN6P29350 MIR4651-201ENST00000582622 73 ntBASIC18.47■□□□□ 0.55
PTPN6P29350 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.47■□□□□ 0.55
PTPN6P29350 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.47■□□□□ 0.55
PTPN6P29350 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.47■□□□□ 0.55
PTPN6P29350 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTPN6P29350 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.47■□□□□ 0.55
PTPN6P29350 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms