Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
NCLP19338 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
NCLP19338 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC23.13■■□□□ 1.29
NCLP19338 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC23.13■■□□□ 1.29
NCLP19338 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC23.13■■□□□ 1.29
NCLP19338 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC23.13■■□□□ 1.29
NCLP19338 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC23.13■■□□□ 1.29
NCLP19338 CD37-204ENST00000535669 1674 ntTSL 2 BASIC23.13■■□□□ 1.29
NCLP19338 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
NCLP19338 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
NCLP19338 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
NCLP19338 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC23.12■■□□□ 1.29
NCLP19338 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NCLP19338 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC23.12■■□□□ 1.29
NCLP19338 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
NCLP19338 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC23.12■■□□□ 1.29
NCLP19338 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NCLP19338 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
NCLP19338 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC23.12■■□□□ 1.29
NCLP19338 MOK-225ENST00000522867 1883 ntTSL 5 BASIC23.12■■□□□ 1.29
NCLP19338 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
NCLP19338 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
NCLP19338 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC23.12■■□□□ 1.29
NCLP19338 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
NCLP19338 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
NCLP19338 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC23.12■■□□□ 1.29
NCLP19338 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NCLP19338 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC23.12■■□□□ 1.29
NCLP19338 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
NCLP19338 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC23.11■■□□□ 1.29
NCLP19338 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC23.11■■□□□ 1.29
NCLP19338 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC23.11■■□□□ 1.29
NCLP19338 PTGES2-AS1-201ENST00000443493 2100 ntBASIC23.11■■□□□ 1.29
NCLP19338 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NCLP19338 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NCLP19338 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
NCLP19338 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC23.11■■□□□ 1.29
NCLP19338 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC23.11■■□□□ 1.29
NCLP19338 VMO1-204ENST00000441199 741 ntTSL 2 BASIC23.11■■□□□ 1.29
NCLP19338 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC23.11■■□□□ 1.29
NCLP19338 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC23.11■■□□□ 1.29
NCLP19338 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC23.11■■□□□ 1.29
NCLP19338 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC23.11■■□□□ 1.29
NCLP19338 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC23.11■■□□□ 1.29
NCLP19338 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC23.11■■□□□ 1.29
NCLP19338 AC104771.1-201ENST00000603335 964 ntBASIC23.11■■□□□ 1.29
NCLP19338 AL356652.1-201ENST00000615962 565 ntBASIC23.11■■□□□ 1.29
NCLP19338 MAZ-216ENST00000616501 991 ntTSL 5 BASIC23.11■■□□□ 1.29
NCLP19338 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC23.11■■□□□ 1.29
NCLP19338 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
NCLP19338 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
NCLP19338 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
NCLP19338 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NCLP19338 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NCLP19338 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC23.11■■□□□ 1.29
NCLP19338 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
NCLP19338 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NCLP19338 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
NCLP19338 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
NCLP19338 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
NCLP19338 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC23.1■■□□□ 1.29
NCLP19338 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
NCLP19338 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
NCLP19338 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
NCLP19338 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC23.1■■□□□ 1.29
NCLP19338 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC23.1■■□□□ 1.29
NCLP19338 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
NCLP19338 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
NCLP19338 PGM5P4-201ENST00000421970 445 ntBASIC23.1■■□□□ 1.29
NCLP19338 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC23.1■■□□□ 1.29
NCLP19338 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
NCLP19338 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
NCLP19338 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC23.1■■□□□ 1.29
NCLP19338 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
NCLP19338 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC23.1■■□□□ 1.29
NCLP19338 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC23.1■■□□□ 1.29
NCLP19338 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC23.1■■□□□ 1.29
NCLP19338 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
NCLP19338 Z82202.1-201ENST00000623446 1880 ntBASIC23.09■■□□□ 1.29
NCLP19338 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
NCLP19338 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
NCLP19338 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC23.09■■□□□ 1.29
NCLP19338 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
NCLP19338 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC23.09■■□□□ 1.29
NCLP19338 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
NCLP19338 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
NCLP19338 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
NCLP19338 AC007322.1-201ENST00000426983 750 ntBASIC23.09■■□□□ 1.29
NCLP19338 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC23.09■■□□□ 1.29
NCLP19338 DENND3-207ENST00000518347 850 ntTSL 2 BASIC23.09■■□□□ 1.29
NCLP19338 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC23.09■■□□□ 1.29
NCLP19338 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC23.09■■□□□ 1.29
NCLP19338 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
NCLP19338 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
NCLP19338 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC23.09■■□□□ 1.29
NCLP19338 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
NCLP19338 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC23.09■■□□□ 1.29
NCLP19338 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
NCLP19338 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
NCLP19338 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC23.09■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms