Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 AC005332.8-201ENST00000622750 2735 ntBASIC17.11■□□□□ 0.33
ATF1P18846 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATF1P18846 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
ATF1P18846 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.11■□□□□ 0.33
ATF1P18846 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATF1P18846 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATF1P18846 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATF1P18846 CYP2T1P-201ENST00000432607 1285 ntBASIC17.11■□□□□ 0.33
ATF1P18846 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.11■□□□□ 0.33
ATF1P18846 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ATF1P18846 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATF1P18846 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATF1P18846 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ATF1P18846 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
ATF1P18846 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ATF1P18846 AC009113.1-201ENST00000570267 2443 ntBASIC17.11■□□□□ 0.33
ATF1P18846 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.11■□□□□ 0.33
ATF1P18846 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
ATF1P18846 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATF1P18846 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATF1P18846 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATF1P18846 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.11■□□□□ 0.33
ATF1P18846 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATF1P18846 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATF1P18846 AIRN-201ENST00000601203 4374 ntBASIC17.1■□□□□ 0.33
ATF1P18846 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATF1P18846 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.1■□□□□ 0.33
ATF1P18846 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
ATF1P18846 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
ATF1P18846 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATF1P18846 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
ATF1P18846 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
ATF1P18846 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATF1P18846 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.1■□□□□ 0.33
ATF1P18846 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
ATF1P18846 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ATF1P18846 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATF1P18846 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.1■□□□□ 0.33
ATF1P18846 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC17.1■□□□□ 0.33
ATF1P18846 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.1■□□□□ 0.33
ATF1P18846 BID-214ENST00000617586 542 ntTSL 5 BASIC17.1■□□□□ 0.33
ATF1P18846 AC231657.2-201ENST00000624556 255 ntBASIC17.1■□□□□ 0.33
ATF1P18846 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
ATF1P18846 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
ATF1P18846 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ATF1P18846 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ATF1P18846 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATF1P18846 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.1■□□□□ 0.33
ATF1P18846 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATF1P18846 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.1■□□□□ 0.33
ATF1P18846 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATF1P18846 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.09■□□□□ 0.33
ATF1P18846 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ATF1P18846 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
ATF1P18846 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATF1P18846 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
ATF1P18846 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATF1P18846 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
ATF1P18846 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATF1P18846 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATF1P18846 ME3-201ENST00000323418 1068 ntTSL 5 BASIC17.09■□□□□ 0.33
ATF1P18846 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.09■□□□□ 0.33
ATF1P18846 HLA-G-202ENST00000376815 851 ntBASIC17.09■□□□□ 0.33
ATF1P18846 HLA-G-203ENST00000376818 1127 ntBASIC17.09■□□□□ 0.33
ATF1P18846 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.09■□□□□ 0.33
ATF1P18846 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC17.09■□□□□ 0.33
ATF1P18846 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC17.09■□□□□ 0.33
ATF1P18846 AL355472.2-201ENST00000422958 438 ntBASIC17.09■□□□□ 0.33
ATF1P18846 AC026271.2-201ENST00000428091 497 ntBASIC17.09■□□□□ 0.33
ATF1P18846 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.09■□□□□ 0.33
ATF1P18846 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.09■□□□□ 0.33
ATF1P18846 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATF1P18846 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATF1P18846 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATF1P18846 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
ATF1P18846 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ATF1P18846 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATF1P18846 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATF1P18846 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATF1P18846 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATF1P18846 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
ATF1P18846 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.09■□□□□ 0.33
ATF1P18846 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATF1P18846 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.09■□□□□ 0.33
ATF1P18846 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATF1P18846 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATF1P18846 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.09■□□□□ 0.33
ATF1P18846 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
ATF1P18846 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATF1P18846 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ATF1P18846 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ATF1P18846 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ATF1P18846 AL161938.1-201ENST00000569833 2180 ntBASIC17.08■□□□□ 0.33
ATF1P18846 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
ATF1P18846 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
ATF1P18846 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
ATF1P18846 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATF1P18846 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATF1P18846 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ATF1P18846 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms