Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.83■□□□□ 0.45
BMP4P12644 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
BMP4P12644 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
BMP4P12644 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
BMP4P12644 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
BMP4P12644 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
BMP4P12644 AC011484.1-201ENST00000377652 1995 ntBASIC17.83■□□□□ 0.44
BMP4P12644 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.83■□□□□ 0.44
BMP4P12644 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.83■□□□□ 0.44
BMP4P12644 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.83■□□□□ 0.44
BMP4P12644 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
BMP4P12644 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.83■□□□□ 0.44
BMP4P12644 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.44
BMP4P12644 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
BMP4P12644 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
BMP4P12644 AC009113.1-201ENST00000570267 2443 ntBASIC17.83■□□□□ 0.44
BMP4P12644 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.83■□□□□ 0.44
BMP4P12644 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
BMP4P12644 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
BMP4P12644 NOC2LP1-202ENST00000452600 2235 ntBASIC17.83■□□□□ 0.44
BMP4P12644 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
BMP4P12644 AC061975.6-201ENST00000579045 1553 ntBASIC17.83■□□□□ 0.44
BMP4P12644 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
BMP4P12644 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
BMP4P12644 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
BMP4P12644 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
BMP4P12644 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
BMP4P12644 LINC01465-201ENST00000408887 1940 ntBASIC17.82■□□□□ 0.44
BMP4P12644 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.82■□□□□ 0.44
BMP4P12644 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
BMP4P12644 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
BMP4P12644 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.82■□□□□ 0.44
BMP4P12644 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
BMP4P12644 MIPEPP3-201ENST00000412105 444 ntBASIC17.82■□□□□ 0.44
BMP4P12644 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.82■□□□□ 0.44
BMP4P12644 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.82■□□□□ 0.44
BMP4P12644 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
BMP4P12644 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.82■□□□□ 0.44
BMP4P12644 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
BMP4P12644 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
BMP4P12644 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.82■□□□□ 0.44
BMP4P12644 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
BMP4P12644 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
BMP4P12644 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
BMP4P12644 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
BMP4P12644 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.82■□□□□ 0.44
BMP4P12644 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
BMP4P12644 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
BMP4P12644 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.82■□□□□ 0.44
BMP4P12644 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
BMP4P12644 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
BMP4P12644 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
BMP4P12644 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.82■□□□□ 0.44
BMP4P12644 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
BMP4P12644 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BMP4P12644 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
BMP4P12644 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
BMP4P12644 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
BMP4P12644 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BMP4P12644 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.81■□□□□ 0.44
BMP4P12644 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BMP4P12644 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BMP4P12644 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
BMP4P12644 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
BMP4P12644 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
BMP4P12644 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
BMP4P12644 FAM201B-201ENST00000458407 597 ntBASIC17.81■□□□□ 0.44
BMP4P12644 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.81■□□□□ 0.44
BMP4P12644 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17.81■□□□□ 0.44
BMP4P12644 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.81■□□□□ 0.44
BMP4P12644 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.81■□□□□ 0.44
BMP4P12644 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.81■□□□□ 0.44
BMP4P12644 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
BMP4P12644 AC092118.2-201ENST00000613495 667 ntBASIC17.81■□□□□ 0.44
BMP4P12644 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.81■□□□□ 0.44
BMP4P12644 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.81■□□□□ 0.44
BMP4P12644 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BMP4P12644 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BMP4P12644 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
BMP4P12644 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BMP4P12644 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BMP4P12644 AL691432.2-201ENST00000607222 2038 ntBASIC17.81■□□□□ 0.44
BMP4P12644 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.8■□□□□ 0.44
BMP4P12644 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
BMP4P12644 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
BMP4P12644 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.8■□□□□ 0.44
BMP4P12644 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BMP4P12644 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BMP4P12644 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
BMP4P12644 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BMP4P12644 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.8■□□□□ 0.44
BMP4P12644 RARRES2P4-201ENST00000514074 484 ntBASIC17.8■□□□□ 0.44
BMP4P12644 AC016405.3-201ENST00000607710 860 ntBASIC17.8■□□□□ 0.44
BMP4P12644 TMEM191A-211ENST00000637163 1067 ntBASIC17.8■□□□□ 0.44
BMP4P12644 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.8■□□□□ 0.44
BMP4P12644 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BMP4P12644 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
BMP4P12644 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.8■□□□□ 0.44
BMP4P12644 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.8■□□□□ 0.44
BMP4P12644 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms